RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
PUM3-202ENST00000397885 FBLN2P98095 1184 aa16.78■□□□□ 0.28
PUM3-202ENST00000397885 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
PUM3-202ENST00000397885 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
PUM3-202ENST00000397885 MAGI1Q96QZ7 1491 aaPredicted RBP16.78■□□□□ 0.28
PUM3-202ENST00000397885 GAPVD1Q14C86 1478 aa16.76■□□□□ 0.27
PUM3-202ENST00000397885 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
PUM3-202ENST00000397885 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
PUM3-202ENST00000397885 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
PUM3-202ENST00000397885 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
PUM3-202ENST00000397885 SYNJ1O43426 1573 aa16.74■□□□□ 0.27
PUM3-202ENST00000397885 ABCA5Q8WWZ7 1642 aa16.73■□□□□ 0.27
PUM3-202ENST00000397885 CHMP7Q8WUX9 453 aaPredicted RBP16.73■□□□□ 0.27
PUM3-202ENST00000397885 ARHGEF11O15085 1522 aa16.71■□□□□ 0.27
PUM3-202ENST00000397885 SYNJ2O15056 1496 aa16.71■□□□□ 0.27
PUM3-202ENST00000397885 APLP2Q06481 763 aa16.7■□□□□ 0.26
PUM3-202ENST00000397885 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
PUM3-202ENST00000397885 MYT1LQ9UL68 1186 aa16.64■□□□□ 0.25
PUM3-202ENST00000397885 EEA1Q15075 1411 aa16.62■□□□□ 0.25
PUM3-202ENST00000397885 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
PUM3-202ENST00000397885 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
PUM3-202ENST00000397885 ADAMTS12P58397 1594 aa16.59■□□□□ 0.25
PUM3-202ENST00000397885 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
PUM3-202ENST00000397885 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
PUM3-202ENST00000397885 FHAD1B1AJZ9 1412 aa16.56■□□□□ 0.24
PUM3-202ENST00000397885 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
PUM3-202ENST00000397885 ARAP1Q96P48 1450 aa16.55■□□□□ 0.24
PUM3-202ENST00000397885 RBM19Q9Y4C8 960 aaKnown RBP16.55■□□□□ 0.24
PUM3-202ENST00000397885 NUP160Q12769 1436 aa16.5■□□□□ 0.23
PUM3-202ENST00000397885 CEP170Q5SW79 1584 aa16.48■□□□□ 0.23
PUM3-202ENST00000397885 GOLGA3Q08378 1498 aa16.47■□□□□ 0.23
PUM3-202ENST00000397885 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
PUM3-202ENST00000397885 FANCIQ9NVI1 1328 aa16.45■□□□□ 0.22
PUM3-202ENST00000397885 SHROOM2Q13796 1616 aa16.42■□□□□ 0.22
PUM3-202ENST00000397885 CUL7Q14999 1698 aa16.41■□□□□ 0.22
PUM3-202ENST00000397885 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
PUM3-202ENST00000397885 IGF1RP08069 1367 aa16.41■□□□□ 0.22
PUM3-202ENST00000397885 MSH5O43196 834 aa16.39■□□□□ 0.21
PUM3-202ENST00000397885 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
PUM3-202ENST00000397885 KIF21BO75037 1637 aa16.36■□□□□ 0.21
PUM3-202ENST00000397885 ERCC6L2Q5T890 1561 aa16.36■□□□□ 0.21
PUM3-202ENST00000397885 ERICH6BQ5W0A0 696 aa16.36■□□□□ 0.21
PUM3-202ENST00000397885 FKBP8Q14318 412 aa16.35■□□□□ 0.21
PUM3-202ENST00000397885 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
PUM3-202ENST00000397885 TRHP20396 242 aaPredicted RBP16.32■□□□□ 0.2
PUM3-202ENST00000397885 PRG4Q92954 1404 aaPredicted RBP16.32■□□□□ 0.2
PUM3-202ENST00000397885 NEFLP07196 543 aa16.31■□□□□ 0.2
PUM3-202ENST00000397885 CARMIL1Q5VZK9 1371 aa16.31■□□□□ 0.2
PUM3-202ENST00000397885 KIAA0586Q9BVV6 1533 aa16.3■□□□□ 0.2
PUM3-202ENST00000397885 BCANQ96GW7 911 aa16.28■□□□□ 0.2
PUM3-202ENST00000397885 DEKP35659 375 aaKnown RBP16.27■□□□□ 0.19
PUM3-202ENST00000397885 CLIP1P30622 1438 aa16.25■□□□□ 0.19
PUM3-202ENST00000397885 VPS8Q8N3P4 1428 aa16.23■□□□□ 0.19
PUM3-202ENST00000397885 ANO8Q9HCE9 1232 aaPredicted RBP16.22■□□□□ 0.19
PUM3-202ENST00000397885 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
PUM3-202ENST00000397885 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
PUM3-202ENST00000397885 IQGAP2Q13576 1575 aa16.17■□□□□ 0.18
PUM3-202ENST00000397885 DHX57Q6P158 1386 aaKnown RBP16.16■□□□□ 0.18
PUM3-202ENST00000397885 UBE2Q2Q8WVN8 375 aa16.16■□□□□ 0.18
PUM3-202ENST00000397885 CARMIL2Q6F5E8 1435 aa16.15■□□□□ 0.18
PUM3-202ENST00000397885 CDK11AQ9UQ88 783 aaPredicted RBP16.14■□□□□ 0.18
PUM3-202ENST00000397885 NPM1P06748 294 aaKnown RBP eCLIP16.13■□□□□ 0.17
PUM3-202ENST00000397885 PTPRGP23470 1445 aa16.1■□□□□ 0.17
PUM3-202ENST00000397885 ADCY10Q96PN6 1610 aa16.1■□□□□ 0.17
PUM3-202ENST00000397885 CTTNBP2Q8WZ74 1663 aa16.08■□□□□ 0.16
PUM3-202ENST00000397885 UGGT2Q9NYU1 1516 aa16.08■□□□□ 0.16
PUM3-202ENST00000397885 KCNH8Q96L42 1107 aa16.07■□□□□ 0.16
PUM3-202ENST00000397885 PRXQ9BXM0 1461 aa16.07■□□□□ 0.16
PUM3-202ENST00000397885 ITGAEP38570 1179 aa16.07■□□□□ 0.16
PUM3-202ENST00000397885 MAPKBP1O60336 1514 aa16.07■□□□□ 0.16
PUM3-202ENST00000397885 CCER2I3L3R5 266 aa16.06■□□□□ 0.16
PUM3-202ENST00000397885 DISP1Q96F81 1524 aa16.06■□□□□ 0.16
PUM3-202ENST00000397885 KIF13AQ9H1H9 1805 aa16.05■□□□□ 0.16
PUM3-202ENST00000397885 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
PUM3-202ENST00000397885 KIAA0556O60303 1618 aa16.01■□□□□ 0.15
PUM3-202ENST00000397885 ABCC10Q5T3U5 1492 aa16.01■□□□□ 0.15
PUM3-202ENST00000397885 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
PUM3-202ENST00000397885 UACAQ9BZF9 1416 aa16■□□□□ 0.15
PUM3-202ENST00000397885 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
PUM3-202ENST00000397885 FAM69CQ0P6D2 419 aa15.98■□□□□ 0.15
PUM3-202ENST00000397885 DIP2BQ9P265 1576 aa15.97■□□□□ 0.15
PUM3-202ENST00000397885 NOP58Q9Y2X3 529 aaKnown RBP15.96■□□□□ 0.15
PUM3-202ENST00000397885 RANGAP1P46060 587 aaPredicted RBP15.93■□□□□ 0.14
PUM3-202ENST00000397885 PLB1Q6P1J6 1458 aa15.93■□□□□ 0.14
PUM3-202ENST00000397885 KDM5BQ9UGL1 1544 aa15.91■□□□□ 0.14
PUM3-202ENST00000397885 ASXL2Q76L83 1435 aa15.9■□□□□ 0.14
PUM3-202ENST00000397885 PPP1R15AO75807 674 aaPredicted RBP15.89■□□□□ 0.13
PUM3-202ENST00000397885 ZCCHC11Q5TAX3 1644 aaKnown RBP15.88■□□□□ 0.13
PUM3-202ENST00000397885 PPP4R2Q9NY27 417 aa15.88■□□□□ 0.13
PUM3-202ENST00000397885 GLI2P10070 1586 aa15.88■□□□□ 0.13
PUM3-202ENST00000397885 RRBP1Q9P2E9 1410 aaKnown RBP15.88■□□□□ 0.13
PUM3-202ENST00000397885 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
PUM3-202ENST00000397885 ABCA8O94911 1581 aa15.86■□□□□ 0.13
PUM3-202ENST00000397885 TRIM52Q96A61 297 aa15.86■□□□□ 0.13
PUM3-202ENST00000397885 ANP32CO43423 234 aa15.85■□□□□ 0.13
PUM3-202ENST00000397885 TSPOAP1O95153 1857 aa15.85■□□□□ 0.13
PUM3-202ENST00000397885 SAMD9Q5K651 1589 aa15.84■□□□□ 0.13
PUM3-202ENST00000397885 DDX10Q13206 875 aaKnown RBP15.84■□□□□ 0.13
PUM3-202ENST00000397885 NBR1Q14596 966 aa15.83■□□□□ 0.12
PUM3-202ENST00000397885 CCDC136Q96JN2 1154 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms