RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 PRXQ9BXM0 1461 aa28.07■■■□□ 2.08
AGAP3-202ENST00000397238 P3H3Q8IVL6 736 aa28.05■■■□□ 2.08
AGAP3-202ENST00000397238 CADPSQ9ULU8 1353 aa28.04■■■□□ 2.08
AGAP3-202ENST00000397238 ANP32CO43423 234 aa28.01■■■□□ 2.07
AGAP3-202ENST00000397238 BIVM-ERCC5R4GMW8 1640 aa27.98■■■□□ 2.07
AGAP3-202ENST00000397238 CUX2O14529 1486 aa27.97■■■□□ 2.07
AGAP3-202ENST00000397238 IRX6P78412 446 aaPredicted RBP27.97■■■□□ 2.07
AGAP3-202ENST00000397238 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
AGAP3-202ENST00000397238 WDR97A6NE52 1622 aa27.95■■■□□ 2.07
AGAP3-202ENST00000397238 ERICH3Q5RHP9 1530 aa27.95■■■□□ 2.06
AGAP3-202ENST00000397238 MAPKBP1O60336 1514 aa27.95■■■□□ 2.06
AGAP3-202ENST00000397238 ARHGAP35Q9NRY4 1499 aa27.94■■■□□ 2.06
AGAP3-202ENST00000397238 PPP1R15AO75807 674 aaPredicted RBP27.94■■■□□ 2.06
AGAP3-202ENST00000397238 SETD5Q9C0A6 1442 aa27.93■■■□□ 2.06
AGAP3-202ENST00000397238 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.05
AGAP3-202ENST00000397238 PHLDB1Q86UU1 1377 aa27.83■■■□□ 2.05
AGAP3-202ENST00000397238 IGF1RP08069 1367 aa27.82■■■□□ 2.04
AGAP3-202ENST00000397238 NESP48681 1621 aa27.82■■■□□ 2.04
AGAP3-202ENST00000397238 FGD5Q6ZNL6 1462 aa27.8■■■□□ 2.04
AGAP3-202ENST00000397238 HNRNPUQ00839 825 aaKnown RBP eCLIP27.79■■■□□ 2.04
AGAP3-202ENST00000397238 CARMIL1Q5VZK9 1371 aa27.78■■■□□ 2.04
AGAP3-202ENST00000397238 FANCD2Q9BXW9 1451 aa27.77■■■□□ 2.04
AGAP3-202ENST00000397238 MSH5O43196 834 aa27.76■■■□□ 2.03
AGAP3-202ENST00000397238 CCER2I3L3R5 266 aa27.76■■■□□ 2.03
AGAP3-202ENST00000397238 ERICH6Q7L0X2 663 aa27.73■■■□□ 2.03
AGAP3-202ENST00000397238 RAD54L2Q9Y4B4 1467 aa27.71■■■□□ 2.03
AGAP3-202ENST00000397238 TONSLQ96HA7 1378 aa27.69■■■□□ 2.02
AGAP3-202ENST00000397238 CDK11AQ9UQ88 783 aaPredicted RBP27.66■■■□□ 2.02
AGAP3-202ENST00000397238 LRRC9Q6ZRR7 1453 aa27.65■■■□□ 2.02
AGAP3-202ENST00000397238 TIAM1Q13009 1591 aa27.64■■■□□ 2.01
AGAP3-202ENST00000397238 TIMELESSQ9UNS1 1208 aa27.59■■■□□ 2.01
AGAP3-202ENST00000397238 TDRD9Q8NDG6 1382 aaKnown RBP27.54■■■□□ 2
AGAP3-202ENST00000397238 CNGB1Q14028 1251 aaPredicted RBP27.5■■□□□ 1.99
AGAP3-202ENST00000397238 FHOD3Q2V2M9 1422 aa27.49■■□□□ 1.99
AGAP3-202ENST00000397238 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
AGAP3-202ENST00000397238 TOPBP1Q92547 1522 aa27.47■■□□□ 1.99
AGAP3-202ENST00000397238 FAM9BQ8IZU0 186 aa27.47■■□□□ 1.99
AGAP3-202ENST00000397238 PRDM2Q13029 1718 aa27.45■■□□□ 1.99
AGAP3-202ENST00000397238 CCDC184Q52MB2 194 aa27.43■■□□□ 1.98
AGAP3-202ENST00000397238 FHAD1B1AJZ9 1412 aa27.43■■□□□ 1.98
AGAP3-202ENST00000397238 B4GALNT3Q6L9W6 998 aa27.43■■□□□ 1.98
AGAP3-202ENST00000397238 CHIC2Q9UKJ5 165 aa27.41■■□□□ 1.98
AGAP3-202ENST00000397238 HSPA5P11021 654 aaKnown RBP27.39■■□□□ 1.97
AGAP3-202ENST00000397238 FANCIQ9NVI1 1328 aa27.38■■□□□ 1.97
AGAP3-202ENST00000397238 RRP7BPQ9NSQ0 103 aa27.37■■□□□ 1.97
AGAP3-202ENST00000397238 DNMBPQ6XZF7 1577 aa27.36■■□□□ 1.97
AGAP3-202ENST00000397238 MAP3K1Q13233 1512 aa27.36■■□□□ 1.97
AGAP3-202ENST00000397238 PCF11O94913 1555 aaKnown RBP27.35■■□□□ 1.97
AGAP3-202ENST00000397238 SENP3-EIF4A1A0A087X0R7 540 aa27.34■■□□□ 1.97
AGAP3-202ENST00000397238 WASHC2AQ641Q2 1341 aa27.34■■□□□ 1.97
AGAP3-202ENST00000397238 CCDC18Q5T9S5 1454 aa27.33■■□□□ 1.97
AGAP3-202ENST00000397238 URB2Q14146 1524 aaKnown RBP27.32■■□□□ 1.96
AGAP3-202ENST00000397238 MTUS2Q5JR59 1369 aa27.32■■□□□ 1.96
AGAP3-202ENST00000397238 PPP4R2Q9NY27 417 aa27.31■■□□□ 1.96
AGAP3-202ENST00000397238 ARID3CA6NKF2 412 aa27.3■■□□□ 1.96
AGAP3-202ENST00000397238 ABCA10Q8WWZ4 1543 aa27.29■■□□□ 1.96
AGAP3-202ENST00000397238 MRS2Q9HD23 443 aa27.28■■□□□ 1.96
AGAP3-202ENST00000397238 PTPRKQ15262 1439 aa27.27■■□□□ 1.96
AGAP3-202ENST00000397238 NBR1Q14596 966 aa27.27■■□□□ 1.96
AGAP3-202ENST00000397238 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
AGAP3-202ENST00000397238 FOXD1Q16676 465 aa27.26■■□□□ 1.95
AGAP3-202ENST00000397238 FGD6Q6ZV73 1430 aa27.25■■□□□ 1.95
AGAP3-202ENST00000397238 EIF4G2P78344 907 aaKnown RBP eCLIP27.24■■□□□ 1.952e-6■■■■□ 23.5
AGAP3-202ENST00000397238 UACAQ9BZF9 1416 aa27.21■■□□□ 1.95
AGAP3-202ENST00000397238 POLR3GLQ9BT43 218 aa27.21■■□□□ 1.95
AGAP3-202ENST00000397238 AQRO60306 1485 aaKnown RBP eCLIP27.21■■□□□ 1.956e-7■■■■□ 22.9
AGAP3-202ENST00000397238 C11orf95C9JLR9 678 aaPredicted RBP27.19■■□□□ 1.94
AGAP3-202ENST00000397238 DEKP35659 375 aaKnown RBP27.18■■□□□ 1.94
AGAP3-202ENST00000397238 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
AGAP3-202ENST00000397238 LAMC3Q9Y6N6 1575 aa27.16■■□□□ 1.94
AGAP3-202ENST00000397238 CFAP43Q8NDM7 1665 aa27.14■■□□□ 1.93
AGAP3-202ENST00000397238 PRKRIP1Q9H875 184 aaPredicted RBP27.13■■□□□ 1.93
AGAP3-202ENST00000397238 CASKIN1Q8WXD9 1431 aa27.13■■□□□ 1.93
AGAP3-202ENST00000397238 HFM1A2PYH4 1435 aa27.12■■□□□ 1.93
AGAP3-202ENST00000397238 NAIPQ13075 1403 aa27.12■■□□□ 1.93
AGAP3-202ENST00000397238 L3MBTL2Q969R5 705 aa27.12■■□□□ 1.93
AGAP3-202ENST00000397238 FYCO1Q9BQS8 1478 aa27.1■■□□□ 1.93
AGAP3-202ENST00000397238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.08■■□□□ 1.936e-8■■■□□ 15.4
AGAP3-202ENST00000397238 PAK3O75914 559 aaPredicted RBP27.08■■□□□ 1.93
AGAP3-202ENST00000397238 ERICH6BQ5W0A0 696 aa27.05■■□□□ 1.92
AGAP3-202ENST00000397238 FMN1Q68DA7 1419 aa27.05■■□□□ 1.92
AGAP3-202ENST00000397238 PTPN23Q9H3S7 1636 aa27.05■■□□□ 1.92
AGAP3-202ENST00000397238 NOP58Q9Y2X3 529 aaKnown RBP27.05■■□□□ 1.92
AGAP3-202ENST00000397238 CNTLNQ9NXG0 1405 aa27.01■■□□□ 1.91
AGAP3-202ENST00000397238 MPHOSPH9Q99550 1183 aa27.01■■□□□ 1.91
AGAP3-202ENST00000397238 KIF21AQ7Z4S6 1674 aa27■■□□□ 1.91
AGAP3-202ENST00000397238 NCOA2Q15596 1464 aa26.99■■□□□ 1.91
AGAP3-202ENST00000397238 ZBED9Q6R2W3 1325 aa26.99■■□□□ 1.91
AGAP3-202ENST00000397238 ZNF326Q5BKZ1 582 aaKnown RBP26.99■■□□□ 1.91
AGAP3-202ENST00000397238 CCDC136Q96JN2 1154 aa26.98■■□□□ 1.91
AGAP3-202ENST00000397238 CCDC7Q96M83 1385 aa26.96■■□□□ 1.91
AGAP3-202ENST00000397238 MYOM3Q5VTT5 1437 aa26.96■■□□□ 1.91
AGAP3-202ENST00000397238 FBLN2P98095 1184 aa26.96■■□□□ 1.91
AGAP3-202ENST00000397238 NBPF8Q3BBV2 869 aa26.96■■□□□ 1.91
AGAP3-202ENST00000397238 KDM5BQ9UGL1 1544 aa26.96■■□□□ 1.91
AGAP3-202ENST00000397238 CUL7Q14999 1698 aa26.95■■□□□ 1.91
AGAP3-202ENST00000397238 AKNAQ7Z591 1439 aa26.93■■□□□ 1.9
AGAP3-202ENST00000397238 KIF7Q2M1P5 1343 aa26.9■■□□□ 1.9
AGAP3-202ENST00000397238 EFCAB5A4FU69 1503 aa26.89■■□□□ 1.89
AGAP3-202ENST00000397238 ANP32AP39687 249 aaKnown RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms