RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 MAPKBP1O60336 1514 aa34.18■■■■□ 3.06
CSNK1E-203ENST00000396832 CUX2O14529 1486 aa34.16■■■■□ 3.06
CSNK1E-203ENST00000396832 PHLDB1Q86UU1 1377 aa34.08■■■■□ 3.05
CSNK1E-203ENST00000396832 RBM19Q9Y4C8 960 aaKnown RBP34.07■■■■□ 3.04
CSNK1E-203ENST00000396832 HMGXB3Q12766 1538 aa34.07■■■■□ 3.04
CSNK1E-203ENST00000396832 WDR97A6NE52 1622 aa34.06■■■■□ 3.04
CSNK1E-203ENST00000396832 CC2D2AQ9P2K1 1620 aa34.04■■■■□ 3.04
CSNK1E-203ENST00000396832 TIAM1Q13009 1591 aa34.03■■■■□ 3.04
CSNK1E-203ENST00000396832 IGF1RP08069 1367 aa34.02■■■■□ 3.04
CSNK1E-203ENST00000396832 CFTRP13569 1480 aa34.02■■■■□ 3.04
CSNK1E-203ENST00000396832 SETD5Q9C0A6 1442 aa34.02■■■■□ 3.04
CSNK1E-203ENST00000396832 TRIM52Q96A61 297 aa33.97■■■■□ 3.03
CSNK1E-203ENST00000396832 DNAJC5BQ9UF47 199 aa33.96■■■■□ 3.03
CSNK1E-203ENST00000396832 CARMIL1Q5VZK9 1371 aa33.95■■■■□ 3.02
CSNK1E-203ENST00000396832 NEFLP07196 543 aa33.94■■■■□ 3.02
CSNK1E-203ENST00000396832 LRRC9Q6ZRR7 1453 aa33.93■■■■□ 3.02
CSNK1E-203ENST00000396832 FGD5Q6ZNL6 1462 aa33.83■■■■□ 3.01
CSNK1E-203ENST00000396832 FHOD3Q2V2M9 1422 aa33.81■■■■□ 3
CSNK1E-203ENST00000396832 PCF11O94913 1555 aaKnown RBP33.81■■■■□ 3
CSNK1E-203ENST00000396832 PPP1R15AO75807 674 aaPredicted RBP33.77■■■■□ 3
CSNK1E-203ENST00000396832 MSH5O43196 834 aa33.72■■■□□ 2.99
CSNK1E-203ENST00000396832 ANP32CO43423 234 aa33.69■■■□□ 2.98
CSNK1E-203ENST00000396832 CADPSQ9ULU8 1353 aa33.69■■■□□ 2.98
CSNK1E-203ENST00000396832 FHAD1B1AJZ9 1412 aa33.67■■■□□ 2.98
CSNK1E-203ENST00000396832 CCER2I3L3R5 266 aa33.66■■■□□ 2.98
CSNK1E-203ENST00000396832 MAP3K1Q13233 1512 aa33.65■■■□□ 2.98
CSNK1E-203ENST00000396832 NESP48681 1621 aa33.63■■■□□ 2.97
CSNK1E-203ENST00000396832 CFAP43Q8NDM7 1665 aa33.61■■■□□ 2.97
CSNK1E-203ENST00000396832 RAD54L2Q9Y4B4 1467 aa33.6■■■□□ 2.97
CSNK1E-203ENST00000396832 TONSLQ96HA7 1378 aa33.59■■■□□ 2.97
CSNK1E-203ENST00000396832 PRDM2Q13029 1718 aa33.58■■■□□ 2.97
CSNK1E-203ENST00000396832 IRX6P78412 446 aaPredicted RBP33.53■■■□□ 2.96
CSNK1E-203ENST00000396832 FANCIQ9NVI1 1328 aa33.49■■■□□ 2.95
CSNK1E-203ENST00000396832 TIMELESSQ9UNS1 1208 aa33.46■■■□□ 2.95
CSNK1E-203ENST00000396832 CCDC18Q5T9S5 1454 aa33.45■■■□□ 2.95
CSNK1E-203ENST00000396832 MTUS2Q5JR59 1369 aa33.43■■■□□ 2.94
CSNK1E-203ENST00000396832 PTPRKQ15262 1439 aa33.43■■■□□ 2.94
CSNK1E-203ENST00000396832 FGD6Q6ZV73 1430 aa33.42■■■□□ 2.94
CSNK1E-203ENST00000396832 ERICH6Q7L0X2 663 aa33.42■■■□□ 2.94
CSNK1E-203ENST00000396832 FYCO1Q9BQS8 1478 aa33.41■■■□□ 2.94
CSNK1E-203ENST00000396832 CDK11AQ9UQ88 783 aaPredicted RBP33.41■■■□□ 2.94
CSNK1E-203ENST00000396832 FANCD2Q9BXW9 1451 aa33.41■■■□□ 2.94
CSNK1E-203ENST00000396832 HNRNPUQ00839 825 aaKnown RBP eCLIP33.4■■■□□ 2.94
CSNK1E-203ENST00000396832 CASKIN1Q8WXD9 1431 aa33.38■■■□□ 2.93
CSNK1E-203ENST00000396832 CHIC2Q9UKJ5 165 aa33.37■■■□□ 2.93
CSNK1E-203ENST00000396832 RRP7BPQ9NSQ0 103 aa33.33■■■□□ 2.93
CSNK1E-203ENST00000396832 AQRO60306 1485 aaKnown RBP eCLIP33.3■■■□□ 2.921e-6■■■■□ 24
CSNK1E-203ENST00000396832 POLA1P09884 1462 aaPredicted RBP33.29■■■□□ 2.92
CSNK1E-203ENST00000396832 ARID3CA6NKF2 412 aa33.28■■■□□ 2.92
CSNK1E-203ENST00000396832 UACAQ9BZF9 1416 aa33.25■■■□□ 2.91
CSNK1E-203ENST00000396832 PTPN23Q9H3S7 1636 aa33.24■■■□□ 2.91
CSNK1E-203ENST00000396832 EFCAB5A4FU69 1503 aa33.22■■■□□ 2.91
CSNK1E-203ENST00000396832 HFM1A2PYH4 1435 aa33.22■■■□□ 2.91
CSNK1E-203ENST00000396832 FMN1Q68DA7 1419 aa33.2■■■□□ 2.91
CSNK1E-203ENST00000396832 TOPBP1Q92547 1522 aa33.2■■■□□ 2.91
CSNK1E-203ENST00000396832 SNAPC4Q5SXM2 1469 aa33.2■■■□□ 2.91
CSNK1E-203ENST00000396832 NAIPQ13075 1403 aa33.2■■■□□ 2.9
CSNK1E-203ENST00000396832 CTTNBP2Q8WZ74 1663 aa33.19■■■□□ 2.9
CSNK1E-203ENST00000396832 TDRD9Q8NDG6 1382 aaKnown RBP33.19■■■□□ 2.9
CSNK1E-203ENST00000396832 ABCA10Q8WWZ4 1543 aa33.19■■■□□ 2.9
CSNK1E-203ENST00000396832 HSPA5P11021 654 aaKnown RBP33.18■■■□□ 2.9
CSNK1E-203ENST00000396832 FOXD1Q16676 465 aa33.18■■■□□ 2.9
CSNK1E-203ENST00000396832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.18■■■□□ 2.98e-8■■■■□ 24.8
CSNK1E-203ENST00000396832 NCOA2Q15596 1464 aa33.17■■■□□ 2.9
CSNK1E-203ENST00000396832 WASHC2AQ641Q2 1341 aa33.16■■■□□ 2.9
CSNK1E-203ENST00000396832 LRRIQ1Q96JM4 1722 aa33.16■■■□□ 2.9
CSNK1E-203ENST00000396832 CCDC184Q52MB2 194 aa33.15■■■□□ 2.9
CSNK1E-203ENST00000396832 DNMBPQ6XZF7 1577 aa33.15■■■□□ 2.9
CSNK1E-203ENST00000396832 CNGB1Q14028 1251 aaPredicted RBP33.13■■■□□ 2.89
CSNK1E-203ENST00000396832 MYT1LQ9UL68 1186 aa33.11■■■□□ 2.89
CSNK1E-203ENST00000396832 MYOM3Q5VTT5 1437 aa33.11■■■□□ 2.89
CSNK1E-203ENST00000396832 KDM5BQ9UGL1 1544 aa33.06■■■□□ 2.88
CSNK1E-203ENST00000396832 ERICH6BQ5W0A0 696 aa33.06■■■□□ 2.88
CSNK1E-203ENST00000396832 FAM9BQ8IZU0 186 aa33.06■■■□□ 2.88
CSNK1E-203ENST00000396832 PPP4R2Q9NY27 417 aa33.06■■■□□ 2.88
CSNK1E-203ENST00000396832 CUL7Q14999 1698 aa33.05■■■□□ 2.88
CSNK1E-203ENST00000396832 DEKP35659 375 aaKnown RBP33.04■■■□□ 2.88
CSNK1E-203ENST00000396832 C11orf95C9JLR9 678 aaPredicted RBP32.98■■■□□ 2.87
CSNK1E-203ENST00000396832 EIF4G2P78344 907 aaKnown RBP eCLIP32.97■■■□□ 2.873e-13■□□□□ 10.1
CSNK1E-203ENST00000396832 MAGI3Q5TCQ9 1506 aa32.96■■■□□ 2.87
CSNK1E-203ENST00000396832 SUPT6HQ7KZ85 1726 aaKnown RBP32.96■■■□□ 2.87
CSNK1E-203ENST00000396832 SENP3-EIF4A1A0A087X0R7 540 aa32.96■■■□□ 2.87
CSNK1E-203ENST00000396832 KDM6BO15054 1643 aa32.96■■■□□ 2.87
CSNK1E-203ENST00000396832 GRIN2BQ13224 1484 aa32.95■■■□□ 2.87
CSNK1E-203ENST00000396832 URB2Q14146 1524 aaKnown RBP32.94■■■□□ 2.86
CSNK1E-203ENST00000396832 L3MBTL2Q969R5 705 aa32.94■■■□□ 2.86
CSNK1E-203ENST00000396832 DENND4BO75064 1496 aaPredicted RBP32.92■■■□□ 2.86
CSNK1E-203ENST00000396832 B4GALNT3Q6L9W6 998 aa32.89■■■□□ 2.86
CSNK1E-203ENST00000396832 SAMD9Q5K651 1589 aa32.88■■■□□ 2.85
CSNK1E-203ENST00000396832 MRS2Q9HD23 443 aa32.88■■■□□ 2.85
CSNK1E-203ENST00000396832 MPHOSPH9Q99550 1183 aa32.88■■■□□ 2.85
CSNK1E-203ENST00000396832 LAMC3Q9Y6N6 1575 aa32.87■■■□□ 2.85
CSNK1E-203ENST00000396832 PDS5BQ9NTI5 1447 aa32.87■■■□□ 2.85
CSNK1E-203ENST00000396832 EHBP1L1Q8N3D4 1523 aa32.87■■■□□ 2.85
CSNK1E-203ENST00000396832 GAPVD1Q14C86 1478 aa32.85■■■□□ 2.85
CSNK1E-203ENST00000396832 POLR3GLQ9BT43 218 aa32.84■■■□□ 2.85
CSNK1E-203ENST00000396832 UGGT2Q9NYU1 1516 aa32.84■■■□□ 2.85
CSNK1E-203ENST00000396832 CNTLNQ9NXG0 1405 aa32.82■■■□□ 2.84
CSNK1E-203ENST00000396832 PRKRIP1Q9H875 184 aaPredicted RBP32.8■■■□□ 2.84
CSNK1E-203ENST00000396832 NOP58Q9Y2X3 529 aaKnown RBP32.8■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms