RNA–Protein interactions for RNA: ENST00000396527.7

EIF4A1-202, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 1,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-202ENST00000396527 GOLGA3Q08378 1498 aa12.14□□□□□ -0.47
EIF4A1-202ENST00000396527 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
EIF4A1-202ENST00000396527 UBTFP17480 764 aaKnown RBP12.13□□□□□ -0.47
EIF4A1-202ENST00000396527 GAPVD1Q14C86 1478 aa12.13□□□□□ -0.47
EIF4A1-202ENST00000396527 CEP162Q5TB80 1403 aa12.12□□□□□ -0.47
EIF4A1-202ENST00000396527 CYB5RLQ6IPT4 315 aa12.12□□□□□ -0.47
EIF4A1-202ENST00000396527 BIVM-ERCC5R4GMW8 1640 aa12.11□□□□□ -0.47
EIF4A1-202ENST00000396527 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
EIF4A1-202ENST00000396527 KIF21BO75037 1637 aa12.1□□□□□ -0.47
EIF4A1-202ENST00000396527 SYNJ2O15056 1496 aa12.09□□□□□ -0.47
EIF4A1-202ENST00000396527 ZEB1P37275 1124 aaPredicted RBP12.05□□□□□ -0.48
EIF4A1-202ENST00000396527 PBRM1Q86U86 1689 aa12.05□□□□□ -0.48
EIF4A1-202ENST00000396527 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
EIF4A1-202ENST00000396527 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
EIF4A1-202ENST00000396527 ARAP1Q96P48 1450 aa12.02□□□□□ -0.48
EIF4A1-202ENST00000396527 CLASP1Q7Z460 1538 aa12.02□□□□□ -0.48
EIF4A1-202ENST00000396527 KIF27Q86VH2 1401 aa12.02□□□□□ -0.49
EIF4A1-202ENST00000396527 PRXQ9BXM0 1461 aa12.02□□□□□ -0.49
EIF4A1-202ENST00000396527 RAPGEF2Q9Y4G8 1499 aa12□□□□□ -0.49
EIF4A1-202ENST00000396527 PPARGC1BQ86YN6 1023 aaKnown RBP11.99□□□□□ -0.49
EIF4A1-202ENST00000396527 ERICH3Q5RHP9 1530 aa11.98□□□□□ -0.49
EIF4A1-202ENST00000396527 GRIN2AQ12879 1464 aa11.98□□□□□ -0.49
EIF4A1-202ENST00000396527 FHAD1B1AJZ9 1412 aa11.98□□□□□ -0.49
EIF4A1-202ENST00000396527 CLIP1P30622 1438 aa11.98□□□□□ -0.49
EIF4A1-202ENST00000396527 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
EIF4A1-202ENST00000396527 CACNB1Q02641 598 aaPredicted RBP11.96□□□□□ -0.49
EIF4A1-202ENST00000396527 ADAMTS12P58397 1594 aa11.96□□□□□ -0.5
EIF4A1-202ENST00000396527 NUP160Q12769 1436 aa11.93□□□□□ -0.5
EIF4A1-202ENST00000396527 IGF1RP08069 1367 aa11.92□□□□□ -0.5
EIF4A1-202ENST00000396527 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
EIF4A1-202ENST00000396527 CEP170Q5SW79 1584 aa11.9□□□□□ -0.5
EIF4A1-202ENST00000396527 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
EIF4A1-202ENST00000396527 APLP2Q06481 763 aa11.86□□□□□ -0.51
EIF4A1-202ENST00000396527 CARMIL1Q5VZK9 1371 aa11.85□□□□□ -0.51
EIF4A1-202ENST00000396527 PRG4Q92954 1404 aaPredicted RBP11.84□□□□□ -0.51
EIF4A1-202ENST00000396527 ERCC6L2Q5T890 1561 aa11.84□□□□□ -0.51
EIF4A1-202ENST00000396527 SHROOM2Q13796 1616 aa11.82□□□□□ -0.52
EIF4A1-202ENST00000396527 CUL7Q14999 1698 aa11.79□□□□□ -0.52
EIF4A1-202ENST00000396527 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
EIF4A1-202ENST00000396527 KIAA0586Q9BVV6 1533 aa11.78□□□□□ -0.52
EIF4A1-202ENST00000396527 TTBK1Q5TCY1 1321 aaPredicted RBP11.78□□□□□ -0.52
EIF4A1-202ENST00000396527 DCAF8L1A6NGE4 600 aa11.77□□□□□ -0.53
EIF4A1-202ENST00000396527 NPM1P06748 294 aaKnown RBP eCLIP11.77□□□□□ -0.53
EIF4A1-202ENST00000396527 CCER1Q8TC90 406 aaPredicted RBP11.77□□□□□ -0.53
EIF4A1-202ENST00000396527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
EIF4A1-202ENST00000396527 ARHGAP35Q9NRY4 1499 aa11.76□□□□□ -0.53
EIF4A1-202ENST00000396527 CARMIL2Q6F5E8 1435 aa11.7□□□□□ -0.54
EIF4A1-202ENST00000396527 KANK4Q5T7N3 995 aaPredicted RBP11.7□□□□□ -0.54
EIF4A1-202ENST00000396527 MAP3K1Q13233 1512 aa11.7□□□□□ -0.54
EIF4A1-202ENST00000396527 PTPRGP23470 1445 aa11.69□□□□□ -0.54
EIF4A1-202ENST00000396527 FAM69CQ0P6D2 419 aa11.66□□□□□ -0.54
EIF4A1-202ENST00000396527 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
EIF4A1-202ENST00000396527 IQGAP2Q13576 1575 aa11.66□□□□□ -0.54
EIF4A1-202ENST00000396527 ADCY10Q96PN6 1610 aa11.64□□□□□ -0.55
EIF4A1-202ENST00000396527 RRBP1Q9P2E9 1410 aaKnown RBP11.63□□□□□ -0.55
EIF4A1-202ENST00000396527 MAPKBP1O60336 1514 aa11.63□□□□□ -0.55
EIF4A1-202ENST00000396527 ABCC10Q5T3U5 1492 aa11.62□□□□□ -0.55
EIF4A1-202ENST00000396527 EFCAB5A4FU69 1503 aa11.61□□□□□ -0.55
EIF4A1-202ENST00000396527 RNF39Q9H2S5 420 aa11.6□□□□□ -0.55
EIF4A1-202ENST00000396527 HOXD11P31277 338 aaPredicted RBP11.59□□□□□ -0.55
EIF4A1-202ENST00000396527 DISP1Q96F81 1524 aa11.59□□□□□ -0.55
EIF4A1-202ENST00000396527 UGGT2Q9NYU1 1516 aa11.59□□□□□ -0.55
EIF4A1-202ENST00000396527 UACAQ9BZF9 1416 aa11.59□□□□□ -0.55
EIF4A1-202ENST00000396527 KIF13AQ9H1H9 1805 aa11.58□□□□□ -0.56
EIF4A1-202ENST00000396527 PPP4R3CPQ6ZMV5 832 aa11.58□□□□□ -0.56
EIF4A1-202ENST00000396527 TIAM1Q13009 1591 aa11.58□□□□□ -0.56
EIF4A1-202ENST00000396527 CCNB3Q8WWL7 1395 aa11.57□□□□□ -0.56
EIF4A1-202ENST00000396527 ABCC2Q92887 1545 aa11.57□□□□□ -0.56
EIF4A1-202ENST00000396527 P3H3Q8IVL6 736 aa11.57□□□□□ -0.56
EIF4A1-202ENST00000396527 CASKIN1Q8WXD9 1431 aa11.57□□□□□ -0.56
EIF4A1-202ENST00000396527 CLSPNQ9HAW4 1339 aa11.57□□□□□ -0.56
EIF4A1-202ENST00000396527 LRRC9Q6ZRR7 1453 aa11.57□□□□□ -0.56
EIF4A1-202ENST00000396527 DIP2BQ9P265 1576 aa11.56□□□□□ -0.56
EIF4A1-202ENST00000396527 UHRF1BP1LA0JNW5 1464 aa11.56□□□□□ -0.56
EIF4A1-202ENST00000396527 FMN1Q68DA7 1419 aa11.55□□□□□ -0.56
EIF4A1-202ENST00000396527 FHOD3Q2V2M9 1422 aa11.54□□□□□ -0.56
EIF4A1-202ENST00000396527 PLB1Q6P1J6 1458 aa11.54□□□□□ -0.56
EIF4A1-202ENST00000396527 FYCO1Q9BQS8 1478 aa11.54□□□□□ -0.56
EIF4A1-202ENST00000396527 KIAA0556O60303 1618 aa11.53□□□□□ -0.56
EIF4A1-202ENST00000396527 ASXL2Q76L83 1435 aa11.53□□□□□ -0.56
EIF4A1-202ENST00000396527 CTTNBP2Q8WZ74 1663 aa11.53□□□□□ -0.56
EIF4A1-202ENST00000396527 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
EIF4A1-202ENST00000396527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.5□□□□□ -0.576e-7■■□□□ 14.4
EIF4A1-202ENST00000396527 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
EIF4A1-202ENST00000396527 PCF11O94913 1555 aaKnown RBP11.49□□□□□ -0.57
EIF4A1-202ENST00000396527 ATP1B4Q9UN42 357 aaPredicted RBP11.48□□□□□ -0.57
EIF4A1-202ENST00000396527 DHX57Q6P158 1386 aaKnown RBP11.48□□□□□ -0.57
EIF4A1-202ENST00000396527 PHLDB1Q86UU1 1377 aa11.48□□□□□ -0.57
EIF4A1-202ENST00000396527 TSPOAP1O95153 1857 aa11.47□□□□□ -0.57
EIF4A1-202ENST00000396527 CFAP43Q8NDM7 1665 aa11.47□□□□□ -0.57
EIF4A1-202ENST00000396527 KDM6BO15054 1643 aa11.46□□□□□ -0.57
EIF4A1-202ENST00000396527 GLI2P10070 1586 aa11.46□□□□□ -0.57
EIF4A1-202ENST00000396527 ZNF316A6NFI3 1004 aaPredicted RBP11.46□□□□□ -0.57
EIF4A1-202ENST00000396527 ZCCHC11Q5TAX3 1644 aaKnown RBP11.46□□□□□ -0.58
EIF4A1-202ENST00000396527 EPRSP07814 1512 aaKnown RBP11.45□□□□□ -0.58
EIF4A1-202ENST00000396527 CNKSR2Q8WXI2 1034 aa11.44□□□□□ -0.58
EIF4A1-202ENST00000396527 KCNH8Q96L42 1107 aa11.44□□□□□ -0.58
EIF4A1-202ENST00000396527 WDR7Q9Y4E6 1490 aa11.44□□□□□ -0.58
EIF4A1-202ENST00000396527 ABCA8O94911 1581 aa11.42□□□□□ -0.58
EIF4A1-202ENST00000396527 TEX14Q8IWB6 1497 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms