RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
LDHA-204ENST00000396222 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
LDHA-204ENST00000396222 CUL7Q14999 1698 aa11.93□□□□□ -0.5
LDHA-204ENST00000396222 GAPVD1Q14C86 1478 aa11.92□□□□□ -0.5
LDHA-204ENST00000396222 TARBP1Q13395 1621 aaKnown RBP11.91□□□□□ -0.5
LDHA-204ENST00000396222 THOC2Q8NI27 1593 aaKnown RBP11.91□□□□□ -0.5
LDHA-204ENST00000396222 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
LDHA-204ENST00000396222 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
LDHA-204ENST00000396222 CLIP1P30622 1438 aa11.87□□□□□ -0.51
LDHA-204ENST00000396222 GRIN2BQ13224 1484 aa11.85□□□□□ -0.51
LDHA-204ENST00000396222 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
LDHA-204ENST00000396222 FHAD1B1AJZ9 1412 aa11.82□□□□□ -0.52
LDHA-204ENST00000396222 CNKSR2Q8WXI2 1034 aa11.82□□□□□ -0.52
LDHA-204ENST00000396222 AQRO60306 1485 aaKnown RBP eCLIP11.8□□□□□ -0.521e-8■■■■□ 22.9
LDHA-204ENST00000396222 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
LDHA-204ENST00000396222 APLP2Q06481 763 aa11.78□□□□□ -0.52
LDHA-204ENST00000396222 EIF4G3O43432 1585 aaKnown RBP11.78□□□□□ -0.52
LDHA-204ENST00000396222 VPS8Q8N3P4 1428 aa11.77□□□□□ -0.52
LDHA-204ENST00000396222 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.52
LDHA-204ENST00000396222 MAGI1Q96QZ7 1491 aaPredicted RBP11.77□□□□□ -0.53
LDHA-204ENST00000396222 PCGF6Q9BYE7 350 aa11.77□□□□□ -0.53
LDHA-204ENST00000396222 ZNF608Q9ULD9 1512 aaPredicted RBP11.76□□□□□ -0.53
LDHA-204ENST00000396222 ADAMTS12P58397 1594 aa11.76□□□□□ -0.53
LDHA-204ENST00000396222 CTTNBP2Q8WZ74 1663 aa11.76□□□□□ -0.53
LDHA-204ENST00000396222 RANGAP1P46060 587 aaPredicted RBP11.75□□□□□ -0.53
LDHA-204ENST00000396222 TRIM26Q12899 539 aaPredicted RBP11.75□□□□□ -0.53
LDHA-204ENST00000396222 EFCAB5A4FU69 1503 aa11.74□□□□□ -0.53
LDHA-204ENST00000396222 SNAPC4Q5SXM2 1469 aa11.72□□□□□ -0.53
LDHA-204ENST00000396222 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
LDHA-204ENST00000396222 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
LDHA-204ENST00000396222 CHMP7Q8WUX9 453 aaPredicted RBP11.7□□□□□ -0.54
LDHA-204ENST00000396222 ARAP1Q96P48 1450 aa11.69□□□□□ -0.54
LDHA-204ENST00000396222 GRIN2AQ12879 1464 aa11.68□□□□□ -0.54
LDHA-204ENST00000396222 IQGAP2Q13576 1575 aa11.66□□□□□ -0.54
LDHA-204ENST00000396222 FMN1Q68DA7 1419 aa11.66□□□□□ -0.54
LDHA-204ENST00000396222 FKBP8Q14318 412 aa11.66□□□□□ -0.54
LDHA-204ENST00000396222 KIAA0586Q9BVV6 1533 aa11.66□□□□□ -0.54
LDHA-204ENST00000396222 MAPK8IP2Q13387 824 aaPredicted RBP11.65□□□□□ -0.54
LDHA-204ENST00000396222 FBLN2P98095 1184 aa11.64□□□□□ -0.55
LDHA-204ENST00000396222 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
LDHA-204ENST00000396222 MAP3K1Q13233 1512 aa11.61□□□□□ -0.55
LDHA-204ENST00000396222 UGGT2Q9NYU1 1516 aa11.6□□□□□ -0.55
LDHA-204ENST00000396222 PRKCSHP14314 528 aaPredicted RBP11.59□□□□□ -0.55
LDHA-204ENST00000396222 FYCO1Q9BQS8 1478 aa11.59□□□□□ -0.55
LDHA-204ENST00000396222 NUP160Q12769 1436 aa11.59□□□□□ -0.55
LDHA-204ENST00000396222 FHOD3Q2V2M9 1422 aa11.59□□□□□ -0.55
LDHA-204ENST00000396222 HRCP23327 699 aa11.59□□□□□ -0.55
LDHA-204ENST00000396222 P3H3Q8IVL6 736 aa11.59□□□□□ -0.55
LDHA-204ENST00000396222 CARMIL2Q6F5E8 1435 aa11.58□□□□□ -0.56
LDHA-204ENST00000396222 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
LDHA-204ENST00000396222 PPARGC1BQ86YN6 1023 aaKnown RBP11.57□□□□□ -0.56
LDHA-204ENST00000396222 CEP170Q5SW79 1584 aa11.55□□□□□ -0.56
LDHA-204ENST00000396222 ATP1B4Q9UN42 357 aaPredicted RBP11.54□□□□□ -0.56
LDHA-204ENST00000396222 PCF11O94913 1555 aaKnown RBP11.53□□□□□ -0.56
LDHA-204ENST00000396222 TIAM1Q13009 1591 aa11.53□□□□□ -0.56
LDHA-204ENST00000396222 JPH4Q96JJ6 628 aa11.52□□□□□ -0.57
LDHA-204ENST00000396222 KIAA0556O60303 1618 aa11.52□□□□□ -0.57
LDHA-204ENST00000396222 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
LDHA-204ENST00000396222 TTBK1Q5TCY1 1321 aaPredicted RBP11.51□□□□□ -0.57
LDHA-204ENST00000396222 PLCB2Q00722 1185 aa11.5□□□□□ -0.57
LDHA-204ENST00000396222 HECW1Q76N89 1606 aa11.5□□□□□ -0.57
LDHA-204ENST00000396222 DISP1Q96F81 1524 aa11.49□□□□□ -0.57
LDHA-204ENST00000396222 CHD1O14646 1710 aa11.49□□□□□ -0.57
LDHA-204ENST00000396222 CFAP43Q8NDM7 1665 aa11.49□□□□□ -0.57
LDHA-204ENST00000396222 LRRC9Q6ZRR7 1453 aa11.48□□□□□ -0.57
LDHA-204ENST00000396222 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.58
LDHA-204ENST00000396222 MTUS2Q5JR59 1369 aa11.46□□□□□ -0.58
LDHA-204ENST00000396222 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
LDHA-204ENST00000396222 CDK11AQ9UQ88 783 aaPredicted RBP11.45□□□□□ -0.58
LDHA-204ENST00000396222 PRG4Q92954 1404 aaPredicted RBP11.43□□□□□ -0.58
LDHA-204ENST00000396222 RAPGEF6Q8TEU7 1601 aa11.42□□□□□ -0.58
LDHA-204ENST00000396222 TAOK2Q9UL54 1235 aa11.42□□□□□ -0.58
LDHA-204ENST00000396222 EPRSP07814 1512 aaKnown RBP11.42□□□□□ -0.58
LDHA-204ENST00000396222 EHBP1L1Q8N3D4 1523 aa11.42□□□□□ -0.58
LDHA-204ENST00000396222 SHROOM2Q13796 1616 aa11.41□□□□□ -0.58
LDHA-204ENST00000396222 RRBP1Q9P2E9 1410 aaKnown RBP11.41□□□□□ -0.58
LDHA-204ENST00000396222 BCANQ96GW7 911 aa11.41□□□□□ -0.58
LDHA-204ENST00000396222 PTPRGP23470 1445 aa11.4□□□□□ -0.59
LDHA-204ENST00000396222 CCNB3Q8WWL7 1395 aa11.39□□□□□ -0.59
LDHA-204ENST00000396222 CLASP1Q7Z460 1538 aa11.39□□□□□ -0.59
LDHA-204ENST00000396222 SUPT6HQ7KZ85 1726 aaKnown RBP11.38□□□□□ -0.59
LDHA-204ENST00000396222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.38□□□□□ -0.59
LDHA-204ENST00000396222 ZEB1P37275 1124 aaPredicted RBP11.38□□□□□ -0.59
LDHA-204ENST00000396222 HNRNPUL2Q1KMD3 747 aaKnown RBP11.38□□□□□ -0.59
LDHA-204ENST00000396222 NUP153P49790 1475 aaKnown RBP11.36□□□□□ -0.59
LDHA-204ENST00000396222 OSCARQ8IYS5 282 aa11.36□□□□□ -0.59
LDHA-204ENST00000396222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
LDHA-204ENST00000396222 LRRIQ1Q96JM4 1722 aa11.35□□□□□ -0.59
LDHA-204ENST00000396222 ABCA8O94911 1581 aa11.34□□□□□ -0.59
LDHA-204ENST00000396222 PLB1Q6P1J6 1458 aa11.34□□□□□ -0.59
LDHA-204ENST00000396222 PHLDB1Q86UU1 1377 aa11.33□□□□□ -0.6
LDHA-204ENST00000396222 CDK13Q14004 1512 aaKnown RBP11.33□□□□□ -0.6
LDHA-204ENST00000396222 NCOA2Q15596 1464 aa11.33□□□□□ -0.6
LDHA-204ENST00000396222 UACAQ9BZF9 1416 aa11.32□□□□□ -0.6
LDHA-204ENST00000396222 PLEKHD1A6NEE1 506 aa11.32□□□□□ -0.6
LDHA-204ENST00000396222 PLSCR2Q9NRY7 297 aa11.32□□□□□ -0.6
LDHA-204ENST00000396222 MYOM3Q5VTT5 1437 aa11.32□□□□□ -0.6
LDHA-204ENST00000396222 HAP1P54257 671 aaPredicted RBP11.31□□□□□ -0.6
LDHA-204ENST00000396222 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
LDHA-204ENST00000396222 TROQ12816 1431 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms