RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
PDE1C-202ENST00000396182 MAPKBP1O60336 1514 aa23.04■■□□□ 1.28
PDE1C-202ENST00000396182 LRRC9Q6ZRR7 1453 aa23.04■■□□□ 1.28
PDE1C-202ENST00000396182 PHLDB1Q86UU1 1377 aa23.03■■□□□ 1.28
PDE1C-202ENST00000396182 P3H3Q8IVL6 736 aa23.02■■□□□ 1.28
PDE1C-202ENST00000396182 SETD5Q9C0A6 1442 aa23■■□□□ 1.27
PDE1C-202ENST00000396182 KCNH8Q96L42 1107 aa22.99■■□□□ 1.27
PDE1C-202ENST00000396182 FAM50AQ14320 339 aaKnown RBP22.97■■□□□ 1.27
PDE1C-202ENST00000396182 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.26
PDE1C-202ENST00000396182 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
PDE1C-202ENST00000396182 SIN3AQ96ST3 1273 aa22.94■■□□□ 1.26
PDE1C-202ENST00000396182 DAXXQ9UER7 740 aaPredicted RBP22.91■■□□□ 1.26
PDE1C-202ENST00000396182 PCF11O94913 1555 aaKnown RBP22.9■■□□□ 1.26
PDE1C-202ENST00000396182 FANCD2Q9BXW9 1451 aa22.89■■□□□ 1.25
PDE1C-202ENST00000396182 FHOD3Q2V2M9 1422 aa22.88■■□□□ 1.25
PDE1C-202ENST00000396182 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
PDE1C-202ENST00000396182 BCANQ96GW7 911 aa22.87■■□□□ 1.25
PDE1C-202ENST00000396182 CFAP43Q8NDM7 1665 aa22.86■■□□□ 1.25
PDE1C-202ENST00000396182 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
PDE1C-202ENST00000396182 WDR97A6NE52 1622 aa22.85■■□□□ 1.25
PDE1C-202ENST00000396182 FKBP8Q14318 412 aa22.82■■□□□ 1.24
PDE1C-202ENST00000396182 DDX10Q13206 875 aaKnown RBP22.81■■□□□ 1.24
PDE1C-202ENST00000396182 ABCA10Q8WWZ4 1543 aa22.79■■□□□ 1.24
PDE1C-202ENST00000396182 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
PDE1C-202ENST00000396182 DNMBPQ6XZF7 1577 aa22.78■■□□□ 1.24
PDE1C-202ENST00000396182 FYCO1Q9BQS8 1478 aa22.77■■□□□ 1.24
PDE1C-202ENST00000396182 CASKIN1Q8WXD9 1431 aa22.77■■□□□ 1.24
PDE1C-202ENST00000396182 TOPBP1Q92547 1522 aa22.76■■□□□ 1.23
PDE1C-202ENST00000396182 BCL11AQ9H165 835 aa22.75■■□□□ 1.23
PDE1C-202ENST00000396182 TIMELESSQ9UNS1 1208 aa22.73■■□□□ 1.23
PDE1C-202ENST00000396182 EFCAB5A4FU69 1503 aa22.73■■□□□ 1.23
PDE1C-202ENST00000396182 HIRIP3Q9BW71 556 aaPredicted RBP22.73■■□□□ 1.23
PDE1C-202ENST00000396182 PPP1R15AO75807 674 aaPredicted RBP22.72■■□□□ 1.23
PDE1C-202ENST00000396182 NESP48681 1621 aa22.72■■□□□ 1.23
PDE1C-202ENST00000396182 AQRO60306 1485 aaKnown RBP eCLIP22.72■■□□□ 1.23
PDE1C-202ENST00000396182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.71■■□□□ 1.23
PDE1C-202ENST00000396182 RBM19Q9Y4C8 960 aaKnown RBP22.68■■□□□ 1.22
PDE1C-202ENST00000396182 NEFLP07196 543 aa22.67■■□□□ 1.22
PDE1C-202ENST00000396182 FGD6Q6ZV73 1430 aa22.66■■□□□ 1.22
PDE1C-202ENST00000396182 CUL7Q14999 1698 aa22.66■■□□□ 1.22
PDE1C-202ENST00000396182 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
PDE1C-202ENST00000396182 FMN1Q68DA7 1419 aa22.65■■□□□ 1.22
PDE1C-202ENST00000396182 CCER2I3L3R5 266 aa22.63■■□□□ 1.21
PDE1C-202ENST00000396182 SNAPC4Q5SXM2 1469 aa22.63■■□□□ 1.21
PDE1C-202ENST00000396182 PTPRKQ15262 1439 aa22.62■■□□□ 1.21
PDE1C-202ENST00000396182 MTUS2Q5JR59 1369 aa22.61■■□□□ 1.21
PDE1C-202ENST00000396182 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.21
PDE1C-202ENST00000396182 TRIM52Q96A61 297 aa22.58■■□□□ 1.21
PDE1C-202ENST00000396182 CCDC18Q5T9S5 1454 aa22.57■■□□□ 1.2
PDE1C-202ENST00000396182 URB2Q14146 1524 aaKnown RBP22.56■■□□□ 1.2
PDE1C-202ENST00000396182 TONSLQ96HA7 1378 aa22.55■■□□□ 1.2
PDE1C-202ENST00000396182 HFM1A2PYH4 1435 aa22.55■■□□□ 1.2
PDE1C-202ENST00000396182 ANP32CO43423 234 aa22.55■■□□□ 1.2
PDE1C-202ENST00000396182 UACAQ9BZF9 1416 aa22.53■■□□□ 1.2
PDE1C-202ENST00000396182 LRRIQ1Q96JM4 1722 aa22.52■■□□□ 1.2
PDE1C-202ENST00000396182 NCOA2Q15596 1464 aa22.52■■□□□ 1.19
PDE1C-202ENST00000396182 SAMD9Q5K651 1589 aa22.51■■□□□ 1.19
PDE1C-202ENST00000396182 PTPN23Q9H3S7 1636 aa22.51■■□□□ 1.19
PDE1C-202ENST00000396182 NAIPQ13075 1403 aa22.5■■□□□ 1.19
PDE1C-202ENST00000396182 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
PDE1C-202ENST00000396182 MYOM3Q5VTT5 1437 aa22.49■■□□□ 1.19
PDE1C-202ENST00000396182 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
PDE1C-202ENST00000396182 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
PDE1C-202ENST00000396182 MSH5O43196 834 aa22.45■■□□□ 1.18
PDE1C-202ENST00000396182 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
PDE1C-202ENST00000396182 PRKCSHP14314 528 aaPredicted RBP22.42■■□□□ 1.18
PDE1C-202ENST00000396182 SUPT6HQ7KZ85 1726 aaKnown RBP22.4■■□□□ 1.18
PDE1C-202ENST00000396182 RRP7BPQ9NSQ0 103 aa22.4■■□□□ 1.18
PDE1C-202ENST00000396182 MAGI3Q5TCQ9 1506 aa22.39■■□□□ 1.17
PDE1C-202ENST00000396182 EHBP1L1Q8N3D4 1523 aa22.39■■□□□ 1.17
PDE1C-202ENST00000396182 KDM5BQ9UGL1 1544 aa22.38■■□□□ 1.17
PDE1C-202ENST00000396182 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
PDE1C-202ENST00000396182 THOC2Q8NI27 1593 aaKnown RBP22.38■■□□□ 1.17
PDE1C-202ENST00000396182 UGGT2Q9NYU1 1516 aa22.37■■□□□ 1.17
PDE1C-202ENST00000396182 FANCIQ9NVI1 1328 aa22.36■■□□□ 1.17
PDE1C-202ENST00000396182 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
PDE1C-202ENST00000396182 ARHGEF11O15085 1522 aa22.35■■□□□ 1.17
PDE1C-202ENST00000396182 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.16
PDE1C-202ENST00000396182 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
PDE1C-202ENST00000396182 DENND4BO75064 1496 aaPredicted RBP22.31■■□□□ 1.16
PDE1C-202ENST00000396182 TCOF1Q13428 1488 aaKnown RBP22.28■■□□□ 1.16
PDE1C-202ENST00000396182 HNRNPUQ00839 825 aaKnown RBP eCLIP22.28■■□□□ 1.16
PDE1C-202ENST00000396182 HSPA5P11021 654 aaKnown RBP22.27■■□□□ 1.16
PDE1C-202ENST00000396182 CDK11AQ9UQ88 783 aaPredicted RBP22.27■■□□□ 1.16
PDE1C-202ENST00000396182 WASHC2AQ641Q2 1341 aa22.27■■□□□ 1.15
PDE1C-202ENST00000396182 TARBP1Q13395 1621 aaKnown RBP22.26■■□□□ 1.15
PDE1C-202ENST00000396182 KDM6BO15054 1643 aa22.25■■□□□ 1.15
PDE1C-202ENST00000396182 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
PDE1C-202ENST00000396182 IRX6P78412 446 aaPredicted RBP22.25■■□□□ 1.15
PDE1C-202ENST00000396182 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
PDE1C-202ENST00000396182 EPRSP07814 1512 aaKnown RBP22.23■■□□□ 1.15
PDE1C-202ENST00000396182 MPHOSPH9Q99550 1183 aa22.22■■□□□ 1.15
PDE1C-202ENST00000396182 GCC2Q8IWJ2 1684 aa22.22■■□□□ 1.15
PDE1C-202ENST00000396182 HECW1Q76N89 1606 aa22.21■■□□□ 1.15
PDE1C-202ENST00000396182 CDK13Q14004 1512 aaKnown RBP22.21■■□□□ 1.15
PDE1C-202ENST00000396182 FOXD1Q16676 465 aa22.2■■□□□ 1.14
PDE1C-202ENST00000396182 AKNAQ7Z591 1439 aa22.19■■□□□ 1.14
PDE1C-202ENST00000396182 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
PDE1C-202ENST00000396182 L3MBTL2Q969R5 705 aa22.18■■□□□ 1.14
PDE1C-202ENST00000396182 EIF4G2P78344 907 aaKnown RBP eCLIP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms