RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 CADPSQ9ULU8 1353 aa11.52□□□□□ -0.57
PTPN20-208ENST00000395727 KIF21AQ7Z4S6 1674 aa11.51□□□□□ -0.57
PTPN20-208ENST00000395727 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
PTPN20-208ENST00000395727 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
PTPN20-208ENST00000395727 CFTRP13569 1480 aa11.45□□□□□ -0.58
PTPN20-208ENST00000395727 WDR62O43379 1518 aa11.44□□□□□ -0.58
PTPN20-208ENST00000395727 CLEC11AQ9Y240 323 aa11.43□□□□□ -0.58
PTPN20-208ENST00000395727 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
PTPN20-208ENST00000395727 CEP164Q9UPV0 1460 aa11.4□□□□□ -0.58
PTPN20-208ENST00000395727 VASPP50552 380 aaPredicted RBP11.4□□□□□ -0.58
PTPN20-208ENST00000395727 DNAJC5Q9H3Z4 198 aa11.4□□□□□ -0.58
PTPN20-208ENST00000395727 PRDM2Q13029 1718 aa11.4□□□□□ -0.58
PTPN20-208ENST00000395727 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
PTPN20-208ENST00000395727 PRR29P0C7W0 189 aa11.35□□□□□ -0.59
PTPN20-208ENST00000395727 CCDC88BA6NC98 1476 aa11.34□□□□□ -0.59
PTPN20-208ENST00000395727 CHRDL2Q6WN34 429 aa11.34□□□□□ -0.59
PTPN20-208ENST00000395727 URB2Q14146 1524 aaKnown RBP11.29□□□□□ -0.6
PTPN20-208ENST00000395727 FXR2P51116 673 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTPN20-208ENST00000395727 MIER1Q8N108 512 aa11.27□□□□□ -0.61
PTPN20-208ENST00000395727 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
PTPN20-208ENST00000395727 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-208ENST00000395727 PLCD3Q8N3E9 789 aa11.25□□□□□ -0.61
PTPN20-208ENST00000395727 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
PTPN20-208ENST00000395727 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.61
PTPN20-208ENST00000395727 DNMBPQ6XZF7 1577 aa11.2□□□□□ -0.62
PTPN20-208ENST00000395727 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
PTPN20-208ENST00000395727 PLEKHG5O94827 1062 aa11.18□□□□□ -0.62
PTPN20-208ENST00000395727 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
PTPN20-208ENST00000395727 IFT140Q96RY7 1462 aa11.18□□□□□ -0.62
PTPN20-208ENST00000395727 PRKAR2AP13861 404 aaKnown RBP11.17□□□□□ -0.62
PTPN20-208ENST00000395727 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
PTPN20-208ENST00000395727 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-208ENST00000395727 KLHL34Q8N239 644 aa11.13□□□□□ -0.63
PTPN20-208ENST00000395727 TARBP1Q13395 1621 aaKnown RBP11.12□□□□□ -0.63
PTPN20-208ENST00000395727 WDR97A6NE52 1622 aa11.1□□□□□ -0.63
PTPN20-208ENST00000395727 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-208ENST00000395727 POLA1P09884 1462 aaPredicted RBP11.1□□□□□ -0.63
PTPN20-208ENST00000395727 EIF4G3O43432 1585 aaKnown RBP11.1□□□□□ -0.63
PTPN20-208ENST00000395727 SPOCK2Q92563 424 aa11.09□□□□□ -0.63
PTPN20-208ENST00000395727 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
PTPN20-208ENST00000395727 CUX1P39880 1505 aa11.04□□□□□ -0.64
PTPN20-208ENST00000395727 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
PTPN20-208ENST00000395727 NUBP1P53384 320 aa11.04□□□□□ -0.64
PTPN20-208ENST00000395727 FGD5Q6ZNL6 1462 aa11.03□□□□□ -0.64
PTPN20-208ENST00000395727 SOGA1O94964 1423 aa11.01□□□□□ -0.65
PTPN20-208ENST00000395727 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
PTPN20-208ENST00000395727 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
PTPN20-208ENST00000395727 AQRO60306 1485 aaKnown RBP eCLIP10.98□□□□□ -0.65
PTPN20-208ENST00000395727 RAD54L2Q9Y4B4 1467 aa10.98□□□□□ -0.65
PTPN20-208ENST00000395727 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
PTPN20-208ENST00000395727 RASEFQ8IZ41 740 aa10.97□□□□□ -0.65
PTPN20-208ENST00000395727 CHD1O14646 1710 aa10.96□□□□□ -0.65
PTPN20-208ENST00000395727 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.65
PTPN20-208ENST00000395727 ABCA10Q8WWZ4 1543 aa10.95□□□□□ -0.66
PTPN20-208ENST00000395727 MAGI1Q96QZ7 1491 aaPredicted RBP10.95□□□□□ -0.66
PTPN20-208ENST00000395727 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
PTPN20-208ENST00000395727 GRIN2BQ13224 1484 aa10.94□□□□□ -0.66
PTPN20-208ENST00000395727 TOP2BQ02880 1626 aa10.94□□□□□ -0.66
PTPN20-208ENST00000395727 POTEHQ6S545 545 aa10.93□□□□□ -0.66
PTPN20-208ENST00000395727 TDRD9Q8NDG6 1382 aaKnown RBP10.92□□□□□ -0.66
PTPN20-208ENST00000395727 RIMBP3CA6NJZ7 1639 aa10.92□□□□□ -0.66
PTPN20-208ENST00000395727 RIMBP3BA6NNM3 1639 aa10.92□□□□□ -0.66
PTPN20-208ENST00000395727 RIMBP3Q9UFD9 1639 aa10.92□□□□□ -0.66
PTPN20-208ENST00000395727 ARHGEF11O15085 1522 aa10.92□□□□□ -0.66
PTPN20-208ENST00000395727 SNAPC4Q5SXM2 1469 aa10.92□□□□□ -0.66
PTPN20-208ENST00000395727 PBRM1Q86U86 1689 aa10.92□□□□□ -0.66
PTPN20-208ENST00000395727 PKD2Q13563 968 aa10.9□□□□□ -0.66
PTPN20-208ENST00000395727 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
PTPN20-208ENST00000395727 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
PTPN20-208ENST00000395727 CLASP1Q7Z460 1538 aa10.89□□□□□ -0.67
PTPN20-208ENST00000395727 SYNJ2O15056 1496 aa10.89□□□□□ -0.67
PTPN20-208ENST00000395727 GAPVD1Q14C86 1478 aa10.89□□□□□ -0.67
PTPN20-208ENST00000395727 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
PTPN20-208ENST00000395727 GSE1Q14687 1217 aa10.89□□□□□ -0.67
PTPN20-208ENST00000395727 SYNJ1O43426 1573 aa10.89□□□□□ -0.67
PTPN20-208ENST00000395727 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
PTPN20-208ENST00000395727 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
PTPN20-208ENST00000395727 CD44P16070 742 aaKnown RBP10.85□□□□□ -0.67
PTPN20-208ENST00000395727 TSPYL2Q9H2G4 693 aaPredicted RBP10.85□□□□□ -0.67
PTPN20-208ENST00000395727 ERICH3Q5RHP9 1530 aa10.84□□□□□ -0.67
PTPN20-208ENST00000395727 ADAMTS12P58397 1594 aa10.83□□□□□ -0.68
PTPN20-208ENST00000395727 TRIM41Q8WV44 630 aa10.83□□□□□ -0.68
PTPN20-208ENST00000395727 CCDC61Q9Y6R9 512 aa10.82□□□□□ -0.68
PTPN20-208ENST00000395727 PAK3O75914 559 aaPredicted RBP10.81□□□□□ -0.68
PTPN20-208ENST00000395727 GRIN2AQ12879 1464 aa10.81□□□□□ -0.68
PTPN20-208ENST00000395727 ARAP1Q96P48 1450 aa10.81□□□□□ -0.68
PTPN20-208ENST00000395727 HAX1O00165 279 aa10.8□□□□□ -0.68
PTPN20-208ENST00000395727 CHMP7Q8WUX9 453 aaPredicted RBP10.8□□□□□ -0.68
PTPN20-208ENST00000395727 FHAD1B1AJZ9 1412 aa10.78□□□□□ -0.68
PTPN20-208ENST00000395727 NUP160Q12769 1436 aa10.78□□□□□ -0.68
PTPN20-208ENST00000395727 CHRM1P11229 460 aaPredicted RBP10.78□□□□□ -0.68
PTPN20-208ENST00000395727 ZRANB1Q9UGI0 708 aa10.78□□□□□ -0.68
PTPN20-208ENST00000395727 ECM2O94769 699 aaPredicted RBP10.77□□□□□ -0.69
PTPN20-208ENST00000395727 EVX2Q03828 476 aa10.77□□□□□ -0.69
PTPN20-208ENST00000395727 CEP170Q5SW79 1584 aa10.75□□□□□ -0.69
PTPN20-208ENST00000395727 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
PTPN20-208ENST00000395727 SHROOM2Q13796 1616 aa10.75□□□□□ -0.69
PTPN20-208ENST00000395727 PYGBP11216 843 aa10.74□□□□□ -0.69
PTPN20-208ENST00000395727 KIF12Q96FN5 646 aa10.71□□□□□ -0.69
PTPN20-208ENST00000395727 PHF12Q96QT6 1004 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms