RNA–Protein interactions for RNA: ENST00000395522.6

SPECC1-202, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene SPECC1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-202ENST00000395522 WDR97A6NE52 1622 aa20.73■□□□□ 0.91
SPECC1-202ENST00000395522 MAPKBP1O60336 1514 aa20.72■□□□□ 0.91
SPECC1-202ENST00000395522 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
SPECC1-202ENST00000395522 SETD5Q9C0A6 1442 aa20.69■□□□□ 0.9
SPECC1-202ENST00000395522 NEFLP07196 543 aa20.68■□□□□ 0.9
SPECC1-202ENST00000395522 IGF1RP08069 1367 aa20.67■□□□□ 0.9
SPECC1-202ENST00000395522 CNGB1Q14028 1251 aaPredicted RBP20.67■□□□□ 0.9
SPECC1-202ENST00000395522 CARMIL1Q5VZK9 1371 aa20.65■□□□□ 0.9
SPECC1-202ENST00000395522 ANP32CO43423 234 aa20.64■□□□□ 0.9
SPECC1-202ENST00000395522 ANP32EQ9BTT0 268 aa20.64■□□□□ 0.89
SPECC1-202ENST00000395522 ARID3CA6NKF2 412 aa20.62■□□□□ 0.89
SPECC1-202ENST00000395522 FHOD3Q2V2M9 1422 aa20.62■□□□□ 0.89
SPECC1-202ENST00000395522 PPP1R15AO75807 674 aaPredicted RBP20.61■□□□□ 0.89
SPECC1-202ENST00000395522 LRRC9Q6ZRR7 1453 aa20.57■□□□□ 0.88
SPECC1-202ENST00000395522 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
SPECC1-202ENST00000395522 TIAM1Q13009 1591 aa20.56■□□□□ 0.88
SPECC1-202ENST00000395522 RBM19Q9Y4C8 960 aaKnown RBP20.55■□□□□ 0.88
SPECC1-202ENST00000395522 SENP3-EIF4A1A0A087X0R7 540 aa20.54■□□□□ 0.88
SPECC1-202ENST00000395522 HNRNPUQ00839 825 aaKnown RBP eCLIP20.54■□□□□ 0.88
SPECC1-202ENST00000395522 TONSLQ96HA7 1378 aa20.53■□□□□ 0.88
SPECC1-202ENST00000395522 CFTRP13569 1480 aa20.53■□□□□ 0.88
SPECC1-202ENST00000395522 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
SPECC1-202ENST00000395522 NCAPD3P42695 1498 aa20.5■□□□□ 0.87
SPECC1-202ENST00000395522 RRP7BPQ9NSQ0 103 aa20.49■□□□□ 0.87
SPECC1-202ENST00000395522 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
SPECC1-202ENST00000395522 PCF11O94913 1555 aaKnown RBP20.45■□□□□ 0.86
SPECC1-202ENST00000395522 FOXD1Q16676 465 aa20.45■□□□□ 0.86
SPECC1-202ENST00000395522 MTUS2Q5JR59 1369 aa20.41■□□□□ 0.86
SPECC1-202ENST00000395522 FHAD1B1AJZ9 1412 aa20.38■□□□□ 0.85
SPECC1-202ENST00000395522 CCDC184Q52MB2 194 aa20.38■□□□□ 0.85
SPECC1-202ENST00000395522 FAM9BQ8IZU0 186 aa20.38■□□□□ 0.85
SPECC1-202ENST00000395522 HMGXB3Q12766 1538 aa20.38■□□□□ 0.85
SPECC1-202ENST00000395522 CADPSQ9ULU8 1353 aa20.37■□□□□ 0.85
SPECC1-202ENST00000395522 POLR3GLQ9BT43 218 aa20.36■□□□□ 0.85
SPECC1-202ENST00000395522 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
SPECC1-202ENST00000395522 CCER2I3L3R5 266 aa20.34■□□□□ 0.85
SPECC1-202ENST00000395522 MSH5O43196 834 aa20.34■□□□□ 0.85
SPECC1-202ENST00000395522 CCDC18Q5T9S5 1454 aa20.33■□□□□ 0.84
SPECC1-202ENST00000395522 BCL11AQ9H165 835 aa20.32■□□□□ 0.84
SPECC1-202ENST00000395522 HSPA5P11021 654 aaKnown RBP20.32■□□□□ 0.84
SPECC1-202ENST00000395522 AQRO60306 1485 aaKnown RBP eCLIP20.3■□□□□ 0.84
SPECC1-202ENST00000395522 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
SPECC1-202ENST00000395522 FGD6Q6ZV73 1430 aa20.29■□□□□ 0.84
SPECC1-202ENST00000395522 WASHC2AQ641Q2 1341 aa20.27■□□□□ 0.84
SPECC1-202ENST00000395522 NESP48681 1621 aa20.26■□□□□ 0.83
SPECC1-202ENST00000395522 B4GALNT3Q6L9W6 998 aa20.25■□□□□ 0.83
SPECC1-202ENST00000395522 ERICH6Q7L0X2 663 aa20.25■□□□□ 0.83
SPECC1-202ENST00000395522 FANCD2Q9BXW9 1451 aa20.24■□□□□ 0.83
SPECC1-202ENST00000395522 ZNF326Q5BKZ1 582 aaKnown RBP20.23■□□□□ 0.83
SPECC1-202ENST00000395522 TIMELESSQ9UNS1 1208 aa20.23■□□□□ 0.83
SPECC1-202ENST00000395522 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
SPECC1-202ENST00000395522 C11orf95C9JLR9 678 aaPredicted RBP20.22■□□□□ 0.83
SPECC1-202ENST00000395522 MAP3K1Q13233 1512 aa20.21■□□□□ 0.83
SPECC1-202ENST00000395522 MRS2Q9HD23 443 aa20.19■□□□□ 0.82
SPECC1-202ENST00000395522 CASKIN1Q8WXD9 1431 aa20.19■□□□□ 0.82
SPECC1-202ENST00000395522 CFAP43Q8NDM7 1665 aa20.18■□□□□ 0.82
SPECC1-202ENST00000395522 L3MBTL2Q969R5 705 aa20.17■□□□□ 0.82
SPECC1-202ENST00000395522 FYCO1Q9BQS8 1478 aa20.17■□□□□ 0.82
SPECC1-202ENST00000395522 NAIPQ13075 1403 aa20.17■□□□□ 0.82
SPECC1-202ENST00000395522 UACAQ9BZF9 1416 aa20.16■□□□□ 0.82
SPECC1-202ENST00000395522 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
SPECC1-202ENST00000395522 EIF4G2P78344 907 aaKnown RBP eCLIP20.16■□□□□ 0.82
SPECC1-202ENST00000395522 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
SPECC1-202ENST00000395522 NCOA2Q15596 1464 aa20.14■□□□□ 0.81
SPECC1-202ENST00000395522 HFM1A2PYH4 1435 aa20.12■□□□□ 0.81
SPECC1-202ENST00000395522 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
SPECC1-202ENST00000395522 PTPN23Q9H3S7 1636 aa20.1■□□□□ 0.81
SPECC1-202ENST00000395522 MPHOSPH9Q99550 1183 aa20.1■□□□□ 0.81
SPECC1-202ENST00000395522 MYOM3Q5VTT5 1437 aa20.07■□□□□ 0.8
SPECC1-202ENST00000395522 TOPBP1Q92547 1522 aa20.07■□□□□ 0.8
SPECC1-202ENST00000395522 NBPF8Q3BBV2 869 aa20.07■□□□□ 0.8
SPECC1-202ENST00000395522 ZNF644Q9H582 1327 aaPredicted RBP20.06■□□□□ 0.8
SPECC1-202ENST00000395522 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
SPECC1-202ENST00000395522 SNAPC4Q5SXM2 1469 aa20.05■□□□□ 0.8
SPECC1-202ENST00000395522 NBR1Q14596 966 aa20.05■□□□□ 0.8
SPECC1-202ENST00000395522 SALL2Q9Y467 1007 aaPredicted RBP20.02■□□□□ 0.8
SPECC1-202ENST00000395522 KDM6BO15054 1643 aa20.01■□□□□ 0.79
SPECC1-202ENST00000395522 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
SPECC1-202ENST00000395522 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
SPECC1-202ENST00000395522 ZNF777Q9ULD5 760 aaPredicted RBP20.01■□□□□ 0.79
SPECC1-202ENST00000395522 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
SPECC1-202ENST00000395522 PPP4R2Q9NY27 417 aa20■□□□□ 0.79
SPECC1-202ENST00000395522 KDM5BQ9UGL1 1544 aa19.99■□□□□ 0.79
SPECC1-202ENST00000395522 PRDM2Q13029 1718 aa19.99■□□□□ 0.79
SPECC1-202ENST00000395522 EFCAB5A4FU69 1503 aa19.98■□□□□ 0.79
SPECC1-202ENST00000395522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.98■□□□□ 0.79
SPECC1-202ENST00000395522 MAGI3Q5TCQ9 1506 aa19.97■□□□□ 0.79
SPECC1-202ENST00000395522 LRRIQ1Q96JM4 1722 aa19.97■□□□□ 0.79
SPECC1-202ENST00000395522 DENND4BO75064 1496 aaPredicted RBP19.96■□□□□ 0.79
SPECC1-202ENST00000395522 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
SPECC1-202ENST00000395522 KIF7Q2M1P5 1343 aa19.95■□□□□ 0.78
SPECC1-202ENST00000395522 CCDC7Q96M83 1385 aa19.95■□□□□ 0.78
SPECC1-202ENST00000395522 CNTLNQ9NXG0 1405 aa19.95■□□□□ 0.78
SPECC1-202ENST00000395522 CDK13Q14004 1512 aaKnown RBP19.95■□□□□ 0.78
SPECC1-202ENST00000395522 AKNAQ7Z591 1439 aa19.94■□□□□ 0.78
SPECC1-202ENST00000395522 CTTNBP2Q8WZ74 1663 aa19.93■□□□□ 0.78
SPECC1-202ENST00000395522 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
SPECC1-202ENST00000395522 URB2Q14146 1524 aaKnown RBP19.9■□□□□ 0.78
SPECC1-202ENST00000395522 FANCIQ9NVI1 1328 aa19.9■□□□□ 0.78
SPECC1-202ENST00000395522 PAK3O75914 559 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms