RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 TRIM52Q96A61 297 aa16.56■□□□□ 0.24
ATP2A1-202ENST00000395503 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
ATP2A1-202ENST00000395503 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
ATP2A1-202ENST00000395503 FHOD3Q2V2M9 1422 aa16.55■□□□□ 0.24
ATP2A1-202ENST00000395503 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
ATP2A1-202ENST00000395503 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
ATP2A1-202ENST00000395503 FKBP8Q14318 412 aa16.53■□□□□ 0.24
ATP2A1-202ENST00000395503 ARID3CA6NKF2 412 aa16.52■□□□□ 0.23
ATP2A1-202ENST00000395503 LRRC9Q6ZRR7 1453 aa16.5■□□□□ 0.23
ATP2A1-202ENST00000395503 MAPKBP1O60336 1514 aa16.5■□□□□ 0.23
ATP2A1-202ENST00000395503 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
ATP2A1-202ENST00000395503 TIAM1Q13009 1591 aa16.48■□□□□ 0.23
ATP2A1-202ENST00000395503 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
ATP2A1-202ENST00000395503 TSHZ2Q9NRE2 1034 aa16.46■□□□□ 0.23
ATP2A1-202ENST00000395503 CHIC2Q9UKJ5 165 aa16.45■□□□□ 0.22
ATP2A1-202ENST00000395503 ANP32CO43423 234 aa16.42■□□□□ 0.22
ATP2A1-202ENST00000395503 PPP1R15AO75807 674 aaPredicted RBP16.42■□□□□ 0.22
ATP2A1-202ENST00000395503 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
ATP2A1-202ENST00000395503 MYT1Q01538 1121 aa16.4■□□□□ 0.22
ATP2A1-202ENST00000395503 TONSLQ96HA7 1378 aa16.4■□□□□ 0.22
ATP2A1-202ENST00000395503 RRP7BPQ9NSQ0 103 aa16.4■□□□□ 0.22
ATP2A1-202ENST00000395503 MTUS2Q5JR59 1369 aa16.39■□□□□ 0.21
ATP2A1-202ENST00000395503 FANCD2Q9BXW9 1451 aa16.39■□□□□ 0.21
ATP2A1-202ENST00000395503 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
ATP2A1-202ENST00000395503 NESP48681 1621 aa16.38■□□□□ 0.21
ATP2A1-202ENST00000395503 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
ATP2A1-202ENST00000395503 NEFLP07196 543 aa16.38■□□□□ 0.21
ATP2A1-202ENST00000395503 CNGB1Q14028 1251 aaPredicted RBP16.37■□□□□ 0.21
ATP2A1-202ENST00000395503 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
ATP2A1-202ENST00000395503 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
ATP2A1-202ENST00000395503 FOXD1Q16676 465 aa16.31■□□□□ 0.2
ATP2A1-202ENST00000395503 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
ATP2A1-202ENST00000395503 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATP2A1-202ENST00000395503 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
ATP2A1-202ENST00000395503 FGD6Q6ZV73 1430 aa16.27■□□□□ 0.2
ATP2A1-202ENST00000395503 MAP3K1Q13233 1512 aa16.27■□□□□ 0.2
ATP2A1-202ENST00000395503 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
ATP2A1-202ENST00000395503 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
ATP2A1-202ENST00000395503 CCDC18Q5T9S5 1454 aa16.25■□□□□ 0.19
ATP2A1-202ENST00000395503 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
ATP2A1-202ENST00000395503 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
ATP2A1-202ENST00000395503 FYCO1Q9BQS8 1478 aa16.22■□□□□ 0.19
ATP2A1-202ENST00000395503 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
ATP2A1-202ENST00000395503 FMN1Q68DA7 1419 aa16.21■□□□□ 0.19
ATP2A1-202ENST00000395503 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
ATP2A1-202ENST00000395503 HSPA5P11021 654 aaKnown RBP16.2■□□□□ 0.18
ATP2A1-202ENST00000395503 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.18
ATP2A1-202ENST00000395503 POLR3GLQ9BT43 218 aa16.2■□□□□ 0.18
ATP2A1-202ENST00000395503 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
ATP2A1-202ENST00000395503 CFAP43Q8NDM7 1665 aa16.17■□□□□ 0.18
ATP2A1-202ENST00000395503 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
ATP2A1-202ENST00000395503 NCOA2Q15596 1464 aa16.17■□□□□ 0.18
ATP2A1-202ENST00000395503 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
ATP2A1-202ENST00000395503 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
ATP2A1-202ENST00000395503 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
ATP2A1-202ENST00000395503 DNMBPQ6XZF7 1577 aa16.16■□□□□ 0.18
ATP2A1-202ENST00000395503 NAIPQ13075 1403 aa16.15■□□□□ 0.18
ATP2A1-202ENST00000395503 UACAQ9BZF9 1416 aa16.15■□□□□ 0.18
ATP2A1-202ENST00000395503 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
ATP2A1-202ENST00000395503 WASHC2AQ641Q2 1341 aa16.14■□□□□ 0.17
ATP2A1-202ENST00000395503 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
ATP2A1-202ENST00000395503 HFM1A2PYH4 1435 aa16.13■□□□□ 0.17
ATP2A1-202ENST00000395503 L3MBTL2Q969R5 705 aa16.13■□□□□ 0.17
ATP2A1-202ENST00000395503 MYOM3Q5VTT5 1437 aa16.12■□□□□ 0.17
ATP2A1-202ENST00000395503 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 C11orf95C9JLR9 678 aaPredicted RBP16.1■□□□□ 0.17
ATP2A1-202ENST00000395503 ZNF644Q9H582 1327 aaPredicted RBP16.09■□□□□ 0.17
ATP2A1-202ENST00000395503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.17
ATP2A1-202ENST00000395503 PTPN23Q9H3S7 1636 aa16.07■□□□□ 0.16
ATP2A1-202ENST00000395503 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
ATP2A1-202ENST00000395503 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
ATP2A1-202ENST00000395503 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
ATP2A1-202ENST00000395503 NBPF8Q3BBV2 869 aa16.02■□□□□ 0.16
ATP2A1-202ENST00000395503 CTTNBP2Q8WZ74 1663 aa16.02■□□□□ 0.15
ATP2A1-202ENST00000395503 GRIN2BQ13224 1484 aa16.02■□□□□ 0.15
ATP2A1-202ENST00000395503 CUL7Q14999 1698 aa16.02■□□□□ 0.15
ATP2A1-202ENST00000395503 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
ATP2A1-202ENST00000395503 CDK13Q14004 1512 aaKnown RBP16.01■□□□□ 0.15
ATP2A1-202ENST00000395503 FBLN2P98095 1184 aa16■□□□□ 0.15
ATP2A1-202ENST00000395503 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
ATP2A1-202ENST00000395503 B4GALNT3Q6L9W6 998 aa15.99■□□□□ 0.15
ATP2A1-202ENST00000395503 KDM6BO15054 1643 aa15.97■□□□□ 0.15
ATP2A1-202ENST00000395503 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
ATP2A1-202ENST00000395503 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
ATP2A1-202ENST00000395503 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
ATP2A1-202ENST00000395503 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
ATP2A1-202ENST00000395503 MSH5O43196 834 aa15.94■□□□□ 0.14
ATP2A1-202ENST00000395503 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
ATP2A1-202ENST00000395503 DENND4BO75064 1496 aaPredicted RBP15.94■□□□□ 0.14
ATP2A1-202ENST00000395503 ERICH6Q7L0X2 663 aa15.93■□□□□ 0.14
ATP2A1-202ENST00000395503 UGGT2Q9NYU1 1516 aa15.93■□□□□ 0.14
ATP2A1-202ENST00000395503 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
ATP2A1-202ENST00000395503 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
ATP2A1-202ENST00000395503 EPRSP07814 1512 aaKnown RBP15.92■□□□□ 0.14
ATP2A1-202ENST00000395503 CCDC7Q96M83 1385 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms