RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 TRIM52Q96A61 297 aa16.56■□□□□ 0.24
ATP2A1-202ENST00000395503 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
ATP2A1-202ENST00000395503 HMGXB3Q12766 1538 aa16.55■□□□□ 0.24
ATP2A1-202ENST00000395503 FHOD3Q2V2M9 1422 aa16.55■□□□□ 0.24
ATP2A1-202ENST00000395503 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
ATP2A1-202ENST00000395503 CADPSQ9ULU8 1353 aa16.54■□□□□ 0.24
ATP2A1-202ENST00000395503 FKBP8Q14318 412 aa16.53■□□□□ 0.24
ATP2A1-202ENST00000395503 ARID3CA6NKF2 412 aa16.52■□□□□ 0.23
ATP2A1-202ENST00000395503 LRRC9Q6ZRR7 1453 aa16.5■□□□□ 0.23
ATP2A1-202ENST00000395503 MAPKBP1O60336 1514 aa16.5■□□□□ 0.23
ATP2A1-202ENST00000395503 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
ATP2A1-202ENST00000395503 TIAM1Q13009 1591 aa16.48■□□□□ 0.23
ATP2A1-202ENST00000395503 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
ATP2A1-202ENST00000395503 TSHZ2Q9NRE2 1034 aa16.46■□□□□ 0.23
ATP2A1-202ENST00000395503 CHIC2Q9UKJ5 165 aa16.45■□□□□ 0.22
ATP2A1-202ENST00000395503 ANP32CO43423 234 aa16.42■□□□□ 0.22
ATP2A1-202ENST00000395503 PPP1R15AO75807 674 aaPredicted RBP16.42■□□□□ 0.22
ATP2A1-202ENST00000395503 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
ATP2A1-202ENST00000395503 MYT1Q01538 1121 aa16.4■□□□□ 0.22
ATP2A1-202ENST00000395503 TONSLQ96HA7 1378 aa16.4■□□□□ 0.22
ATP2A1-202ENST00000395503 RRP7BPQ9NSQ0 103 aa16.4■□□□□ 0.22
ATP2A1-202ENST00000395503 MTUS2Q5JR59 1369 aa16.39■□□□□ 0.21
ATP2A1-202ENST00000395503 FANCD2Q9BXW9 1451 aa16.39■□□□□ 0.21
ATP2A1-202ENST00000395503 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
ATP2A1-202ENST00000395503 NESP48681 1621 aa16.38■□□□□ 0.21
ATP2A1-202ENST00000395503 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
ATP2A1-202ENST00000395503 NEFLP07196 543 aa16.38■□□□□ 0.21
ATP2A1-202ENST00000395503 CNGB1Q14028 1251 aaPredicted RBP16.37■□□□□ 0.21
ATP2A1-202ENST00000395503 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
ATP2A1-202ENST00000395503 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
ATP2A1-202ENST00000395503 FOXD1Q16676 465 aa16.31■□□□□ 0.2
ATP2A1-202ENST00000395503 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
ATP2A1-202ENST00000395503 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATP2A1-202ENST00000395503 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
ATP2A1-202ENST00000395503 FGD6Q6ZV73 1430 aa16.27■□□□□ 0.2
ATP2A1-202ENST00000395503 MAP3K1Q13233 1512 aa16.27■□□□□ 0.2
ATP2A1-202ENST00000395503 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
ATP2A1-202ENST00000395503 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
ATP2A1-202ENST00000395503 CCDC18Q5T9S5 1454 aa16.25■□□□□ 0.19
ATP2A1-202ENST00000395503 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
ATP2A1-202ENST00000395503 TIMELESSQ9UNS1 1208 aa16.24■□□□□ 0.19
ATP2A1-202ENST00000395503 FYCO1Q9BQS8 1478 aa16.22■□□□□ 0.19
ATP2A1-202ENST00000395503 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
ATP2A1-202ENST00000395503 FMN1Q68DA7 1419 aa16.21■□□□□ 0.19
ATP2A1-202ENST00000395503 CCER2I3L3R5 266 aa16.2■□□□□ 0.18
ATP2A1-202ENST00000395503 HSPA5P11021 654 aaKnown RBP16.2■□□□□ 0.18
ATP2A1-202ENST00000395503 AQRO60306 1485 aaKnown RBP eCLIP16.2■□□□□ 0.18
ATP2A1-202ENST00000395503 POLR3GLQ9BT43 218 aa16.2■□□□□ 0.18
ATP2A1-202ENST00000395503 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
ATP2A1-202ENST00000395503 CFAP43Q8NDM7 1665 aa16.17■□□□□ 0.18
ATP2A1-202ENST00000395503 FAM9BQ8IZU0 186 aa16.17■□□□□ 0.18
ATP2A1-202ENST00000395503 NCOA2Q15596 1464 aa16.17■□□□□ 0.18
ATP2A1-202ENST00000395503 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
ATP2A1-202ENST00000395503 CCDC184Q52MB2 194 aa16.16■□□□□ 0.18
ATP2A1-202ENST00000395503 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
ATP2A1-202ENST00000395503 DNMBPQ6XZF7 1577 aa16.16■□□□□ 0.18
ATP2A1-202ENST00000395503 NAIPQ13075 1403 aa16.15■□□□□ 0.18
ATP2A1-202ENST00000395503 UACAQ9BZF9 1416 aa16.15■□□□□ 0.18
ATP2A1-202ENST00000395503 PRDM2Q13029 1718 aa16.14■□□□□ 0.17
ATP2A1-202ENST00000395503 WASHC2AQ641Q2 1341 aa16.14■□□□□ 0.17
ATP2A1-202ENST00000395503 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
ATP2A1-202ENST00000395503 HFM1A2PYH4 1435 aa16.13■□□□□ 0.17
ATP2A1-202ENST00000395503 L3MBTL2Q969R5 705 aa16.13■□□□□ 0.17
ATP2A1-202ENST00000395503 MYOM3Q5VTT5 1437 aa16.12■□□□□ 0.17
ATP2A1-202ENST00000395503 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 URB2Q14146 1524 aaKnown RBP16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 MPHOSPH9Q99550 1183 aa16.11■□□□□ 0.17
ATP2A1-202ENST00000395503 C11orf95C9JLR9 678 aaPredicted RBP16.1■□□□□ 0.17
ATP2A1-202ENST00000395503 ZNF644Q9H582 1327 aaPredicted RBP16.09■□□□□ 0.17
ATP2A1-202ENST00000395503 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.09■□□□□ 0.17
ATP2A1-202ENST00000395503 PTPN23Q9H3S7 1636 aa16.07■□□□□ 0.16
ATP2A1-202ENST00000395503 ZNF777Q9ULD5 760 aaPredicted RBP16.07■□□□□ 0.16
ATP2A1-202ENST00000395503 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
ATP2A1-202ENST00000395503 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
ATP2A1-202ENST00000395503 NBPF8Q3BBV2 869 aa16.02■□□□□ 0.16
ATP2A1-202ENST00000395503 CTTNBP2Q8WZ74 1663 aa16.02■□□□□ 0.15
ATP2A1-202ENST00000395503 GRIN2BQ13224 1484 aa16.02■□□□□ 0.15
ATP2A1-202ENST00000395503 CUL7Q14999 1698 aa16.02■□□□□ 0.15
ATP2A1-202ENST00000395503 MAGI3Q5TCQ9 1506 aa16.02■□□□□ 0.15
ATP2A1-202ENST00000395503 CDK13Q14004 1512 aaKnown RBP16.01■□□□□ 0.15
ATP2A1-202ENST00000395503 FBLN2P98095 1184 aa16■□□□□ 0.15
ATP2A1-202ENST00000395503 CDK11AQ9UQ88 783 aaPredicted RBP16■□□□□ 0.15
ATP2A1-202ENST00000395503 B4GALNT3Q6L9W6 998 aa15.99■□□□□ 0.15
ATP2A1-202ENST00000395503 KDM6BO15054 1643 aa15.97■□□□□ 0.15
ATP2A1-202ENST00000395503 LRRIQ1Q96JM4 1722 aa15.97■□□□□ 0.15
ATP2A1-202ENST00000395503 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
ATP2A1-202ENST00000395503 PDS5BQ9NTI5 1447 aa15.96■□□□□ 0.15
ATP2A1-202ENST00000395503 SUPT6HQ7KZ85 1726 aaKnown RBP15.96■□□□□ 0.15
ATP2A1-202ENST00000395503 MSH5O43196 834 aa15.94■□□□□ 0.14
ATP2A1-202ENST00000395503 EHBP1L1Q8N3D4 1523 aa15.94■□□□□ 0.14
ATP2A1-202ENST00000395503 DENND4BO75064 1496 aaPredicted RBP15.94■□□□□ 0.14
ATP2A1-202ENST00000395503 ERICH6Q7L0X2 663 aa15.93■□□□□ 0.14
ATP2A1-202ENST00000395503 UGGT2Q9NYU1 1516 aa15.93■□□□□ 0.14
ATP2A1-202ENST00000395503 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
ATP2A1-202ENST00000395503 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
ATP2A1-202ENST00000395503 EPRSP07814 1512 aaKnown RBP15.92■□□□□ 0.14
ATP2A1-202ENST00000395503 CCDC7Q96M83 1385 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms