RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SETD5Q9C0A6 1442 aa14.45□□□□□ -0.1
UBE2D3-208ENST00000394803 RAB3GAP2Q9H2M9 1393 aa14.44□□□□□ -0.1
UBE2D3-208ENST00000394803 EFCAB5A4FU69 1503 aa14.44□□□□□ -0.1
UBE2D3-208ENST00000394803 FGD5Q6ZNL6 1462 aa14.42□□□□□ -0.1
UBE2D3-208ENST00000394803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.41□□□□□ -0.11e-10■■■□□ 14.9
UBE2D3-208ENST00000394803 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
UBE2D3-208ENST00000394803 AQRO60306 1485 aaKnown RBP eCLIP14.4□□□□□ -0.12e-7■■■■□ 25.1
UBE2D3-208ENST00000394803 FYCO1Q9BQS8 1478 aa14.39□□□□□ -0.11
UBE2D3-208ENST00000394803 CUL7Q14999 1698 aa14.38□□□□□ -0.11
UBE2D3-208ENST00000394803 PCF11O94913 1555 aaKnown RBP14.36□□□□□ -0.11
UBE2D3-208ENST00000394803 DNMBPQ6XZF7 1577 aa14.36□□□□□ -0.11
UBE2D3-208ENST00000394803 ITGAEP38570 1179 aa14.35□□□□□ -0.11
UBE2D3-208ENST00000394803 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
UBE2D3-208ENST00000394803 CASKIN1Q8WXD9 1431 aa14.34□□□□□ -0.11
UBE2D3-208ENST00000394803 CTTNBP2Q8WZ74 1663 aa14.33□□□□□ -0.11
UBE2D3-208ENST00000394803 ABCA10Q8WWZ4 1543 aa14.33□□□□□ -0.12
UBE2D3-208ENST00000394803 PHLDB1Q86UU1 1377 aa14.33□□□□□ -0.12
UBE2D3-208ENST00000394803 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
UBE2D3-208ENST00000394803 FMN1Q68DA7 1419 aa14.31□□□□□ -0.12
UBE2D3-208ENST00000394803 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
UBE2D3-208ENST00000394803 NESP48681 1621 aa14.29□□□□□ -0.12
UBE2D3-208ENST00000394803 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
UBE2D3-208ENST00000394803 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
UBE2D3-208ENST00000394803 CCER2I3L3R5 266 aa14.24□□□□□ -0.13
UBE2D3-208ENST00000394803 TOPBP1Q92547 1522 aa14.24□□□□□ -0.13
UBE2D3-208ENST00000394803 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
UBE2D3-208ENST00000394803 FHOD3Q2V2M9 1422 aa14.23□□□□□ -0.13
UBE2D3-208ENST00000394803 FGD6Q6ZV73 1430 aa14.23□□□□□ -0.13
UBE2D3-208ENST00000394803 POLA1P09884 1462 aaPredicted RBP14.23□□□□□ -0.13
UBE2D3-208ENST00000394803 PPP1R15AO75807 674 aaPredicted RBP14.2□□□□□ -0.14
UBE2D3-208ENST00000394803 UACAQ9BZF9 1416 aa14.19□□□□□ -0.14
UBE2D3-208ENST00000394803 ANP32CO43423 234 aa14.19□□□□□ -0.14
UBE2D3-208ENST00000394803 ATP1B4Q9UN42 357 aaPredicted RBP14.19□□□□□ -0.14
UBE2D3-208ENST00000394803 TONSLQ96HA7 1378 aa14.19□□□□□ -0.14
UBE2D3-208ENST00000394803 HFM1A2PYH4 1435 aa14.19□□□□□ -0.14
UBE2D3-208ENST00000394803 CCDC18Q5T9S5 1454 aa14.19□□□□□ -0.14
UBE2D3-208ENST00000394803 SAMD9Q5K651 1589 aa14.19□□□□□ -0.14
UBE2D3-208ENST00000394803 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
UBE2D3-208ENST00000394803 NEFLP07196 543 aa14.18□□□□□ -0.14
UBE2D3-208ENST00000394803 MTUS2Q5JR59 1369 aa14.18□□□□□ -0.14
UBE2D3-208ENST00000394803 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
UBE2D3-208ENST00000394803 SUPT6HQ7KZ85 1726 aaKnown RBP14.17□□□□□ -0.14
UBE2D3-208ENST00000394803 EHBP1L1Q8N3D4 1523 aa14.17□□□□□ -0.14
UBE2D3-208ENST00000394803 RAD54L2Q9Y4B4 1467 aa14.17□□□□□ -0.14
UBE2D3-208ENST00000394803 DDX10Q13206 875 aaKnown RBP14.17□□□□□ -0.14
UBE2D3-208ENST00000394803 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
UBE2D3-208ENST00000394803 PTPN23Q9H3S7 1636 aa14.16□□□□□ -0.14
UBE2D3-208ENST00000394803 P3H3Q8IVL6 736 aa14.15□□□□□ -0.14
UBE2D3-208ENST00000394803 MYOM3Q5VTT5 1437 aa14.14□□□□□ -0.15
UBE2D3-208ENST00000394803 ABCA5Q8WWZ7 1642 aa14.14□□□□□ -0.15
UBE2D3-208ENST00000394803 GRIN2BQ13224 1484 aa14.11□□□□□ -0.15
UBE2D3-208ENST00000394803 TSHZ2Q9NRE2 1034 aa14.11□□□□□ -0.15
UBE2D3-208ENST00000394803 NCOA2Q15596 1464 aa14.11□□□□□ -0.15
UBE2D3-208ENST00000394803 AKNAQ7Z591 1439 aa14.09□□□□□ -0.15
UBE2D3-208ENST00000394803 GAPVD1Q14C86 1478 aa14.08□□□□□ -0.16
UBE2D3-208ENST00000394803 GCC2Q8IWJ2 1684 aa14.08□□□□□ -0.16
UBE2D3-208ENST00000394803 NAIPQ13075 1403 aa14.07□□□□□ -0.16
UBE2D3-208ENST00000394803 UGGT2Q9NYU1 1516 aa14.07□□□□□ -0.16
UBE2D3-208ENST00000394803 HECW1Q76N89 1606 aa14.07□□□□□ -0.16
UBE2D3-208ENST00000394803 FKBP8Q14318 412 aa14.06□□□□□ -0.16
UBE2D3-208ENST00000394803 ARHGEF11O15085 1522 aa14.06□□□□□ -0.16
UBE2D3-208ENST00000394803 TCOF1Q13428 1488 aaKnown RBP14.06□□□□□ -0.16
UBE2D3-208ENST00000394803 KCNH8Q96L42 1107 aa14.06□□□□□ -0.16
UBE2D3-208ENST00000394803 PDS5BQ9NTI5 1447 aa14.05□□□□□ -0.16
UBE2D3-208ENST00000394803 LRRIQ1Q96JM4 1722 aa14.05□□□□□ -0.16
UBE2D3-208ENST00000394803 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-208ENST00000394803 MIA2Q96PC5 1412 aa14.02□□□□□ -0.17
UBE2D3-208ENST00000394803 PTPRKQ15262 1439 aa14.01□□□□□ -0.17
UBE2D3-208ENST00000394803 ANP32EQ9BTT0 268 aa14□□□□□ -0.17
UBE2D3-208ENST00000394803 ERCC6Q03468 1493 aa14□□□□□ -0.17
UBE2D3-208ENST00000394803 ERICH6BQ5W0A0 696 aa13.97□□□□□ -0.17
UBE2D3-208ENST00000394803 KDM5BQ9UGL1 1544 aa13.97□□□□□ -0.17
UBE2D3-208ENST00000394803 TDRD9Q8NDG6 1382 aaKnown RBP13.96□□□□□ -0.17
UBE2D3-208ENST00000394803 IQGAP2Q13576 1575 aa13.96□□□□□ -0.17
UBE2D3-208ENST00000394803 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
UBE2D3-208ENST00000394803 TARBP1Q13395 1621 aaKnown RBP13.95□□□□□ -0.18
UBE2D3-208ENST00000394803 BCANQ96GW7 911 aa13.94□□□□□ -0.18
UBE2D3-208ENST00000394803 EPRSP07814 1512 aaKnown RBP13.94□□□□□ -0.18
UBE2D3-208ENST00000394803 EIF4G2P78344 907 aaKnown RBP eCLIP13.94□□□□□ -0.18
UBE2D3-208ENST00000394803 TRIM52Q96A61 297 aa13.94□□□□□ -0.18
UBE2D3-208ENST00000394803 HIRIP3Q9BW71 556 aaPredicted RBP13.92□□□□□ -0.18
UBE2D3-208ENST00000394803 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
UBE2D3-208ENST00000394803 MAGI3Q5TCQ9 1506 aa13.92□□□□□ -0.18
UBE2D3-208ENST00000394803 CNTLNQ9NXG0 1405 aa13.91□□□□□ -0.18
UBE2D3-208ENST00000394803 ADAMTS12P58397 1594 aa13.91□□□□□ -0.18
UBE2D3-208ENST00000394803 WDR62O43379 1518 aa13.9□□□□□ -0.18
UBE2D3-208ENST00000394803 HSPA5P11021 654 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-208ENST00000394803 MRC2Q9UBG0 1479 aa13.88□□□□□ -0.19
UBE2D3-208ENST00000394803 POLR1AO95602 1720 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-208ENST00000394803 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
UBE2D3-208ENST00000394803 MPHOSPH9Q99550 1183 aa13.86□□□□□ -0.19
UBE2D3-208ENST00000394803 RRP7BPQ9NSQ0 103 aa13.86□□□□□ -0.19
UBE2D3-208ENST00000394803 RBM19Q9Y4C8 960 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-208ENST00000394803 DNMT1P26358 1616 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-208ENST00000394803 WASHC2AQ641Q2 1341 aa13.86□□□□□ -0.19
UBE2D3-208ENST00000394803 RPRD2Q5VT52 1461 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-208ENST00000394803 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
UBE2D3-208ENST00000394803 CDK11AQ9UQ88 783 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-208ENST00000394803 DENND4BO75064 1496 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-208ENST00000394803 DAPK1P53355 1430 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms