RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 CCNB3Q8WWL7 1395 aa20.72■□□□□ 0.91
SFMBT1-201ENST00000394752 ERICH3Q5RHP9 1530 aa20.71■□□□□ 0.91
SFMBT1-201ENST00000394752 ANP32CO43423 234 aa20.71■□□□□ 0.91
SFMBT1-201ENST00000394752 ZNF326Q5BKZ1 582 aaKnown RBP20.7■□□□□ 0.9
SFMBT1-201ENST00000394752 PRXQ9BXM0 1461 aa20.7■□□□□ 0.9
SFMBT1-201ENST00000394752 DDX10Q13206 875 aaKnown RBP20.68■□□□□ 0.9
SFMBT1-201ENST00000394752 MYT1LQ9UL68 1186 aa20.67■□□□□ 0.9
SFMBT1-201ENST00000394752 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
SFMBT1-201ENST00000394752 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
SFMBT1-201ENST00000394752 MYT1Q01538 1121 aa20.65■□□□□ 0.9
SFMBT1-201ENST00000394752 CDK11AQ9UQ88 783 aaPredicted RBP20.62■□□□□ 0.89
SFMBT1-201ENST00000394752 NESP48681 1621 aa20.61■□□□□ 0.89
SFMBT1-201ENST00000394752 BIVM-ERCC5R4GMW8 1640 aa20.6■□□□□ 0.89
SFMBT1-201ENST00000394752 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
SFMBT1-201ENST00000394752 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.89
SFMBT1-201ENST00000394752 ERCC6Q03468 1493 aa20.58■□□□□ 0.88
SFMBT1-201ENST00000394752 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
SFMBT1-201ENST00000394752 CLSPNQ9HAW4 1339 aa20.56■□□□□ 0.88
SFMBT1-201ENST00000394752 CHIC2Q9UKJ5 165 aa20.56■□□□□ 0.88
SFMBT1-201ENST00000394752 FMN1Q68DA7 1419 aa20.52■□□□□ 0.88
SFMBT1-201ENST00000394752 ZNF777Q9ULD5 760 aaPredicted RBP20.51■□□□□ 0.87
SFMBT1-201ENST00000394752 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
SFMBT1-201ENST00000394752 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
SFMBT1-201ENST00000394752 TONSLQ96HA7 1378 aa20.48■□□□□ 0.87
SFMBT1-201ENST00000394752 POLA1P09884 1462 aaPredicted RBP20.47■□□□□ 0.87
SFMBT1-201ENST00000394752 FKBP8Q14318 412 aa20.46■□□□□ 0.87
SFMBT1-201ENST00000394752 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
SFMBT1-201ENST00000394752 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
SFMBT1-201ENST00000394752 RRP7BPQ9NSQ0 103 aa20.43■□□□□ 0.86
SFMBT1-201ENST00000394752 SETD5Q9C0A6 1442 aa20.42■□□□□ 0.86
SFMBT1-201ENST00000394752 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
SFMBT1-201ENST00000394752 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
SFMBT1-201ENST00000394752 DHX57Q6P158 1386 aaKnown RBP20.36■□□□□ 0.85
SFMBT1-201ENST00000394752 HNRNPUQ00839 825 aaKnown RBP eCLIP20.36■□□□□ 0.85
SFMBT1-201ENST00000394752 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
SFMBT1-201ENST00000394752 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
SFMBT1-201ENST00000394752 LAMC3Q9Y6N6 1575 aa20.33■□□□□ 0.85
SFMBT1-201ENST00000394752 SLC4A1APQ9BWU0 796 aaKnown RBP20.31■□□□□ 0.84
SFMBT1-201ENST00000394752 LRRC9Q6ZRR7 1453 aa20.31■□□□□ 0.84
SFMBT1-201ENST00000394752 FAM9BQ8IZU0 186 aa20.3■□□□□ 0.84
SFMBT1-201ENST00000394752 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
SFMBT1-201ENST00000394752 AQRO60306 1485 aaKnown RBP eCLIP20.28■□□□□ 0.84
SFMBT1-201ENST00000394752 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
SFMBT1-201ENST00000394752 CASKIN1Q8WXD9 1431 aa20.25■□□□□ 0.83
SFMBT1-201ENST00000394752 PLEKHD1A6NEE1 506 aa20.24■□□□□ 0.83
SFMBT1-201ENST00000394752 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
SFMBT1-201ENST00000394752 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
SFMBT1-201ENST00000394752 IRX6P78412 446 aaPredicted RBP20.23■□□□□ 0.83
SFMBT1-201ENST00000394752 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
SFMBT1-201ENST00000394752 TIAM1Q13009 1591 aa20.22■□□□□ 0.83
SFMBT1-201ENST00000394752 FYCO1Q9BQS8 1478 aa20.22■□□□□ 0.83
SFMBT1-201ENST00000394752 MRC2Q9UBG0 1479 aa20.2■□□□□ 0.82
SFMBT1-201ENST00000394752 TSPY4P0CV99 314 aa20.17■□□□□ 0.82
SFMBT1-201ENST00000394752 TSPY10P0CW01 314 aa20.17■□□□□ 0.82
SFMBT1-201ENST00000394752 CUL7Q14999 1698 aa20.17■□□□□ 0.82
SFMBT1-201ENST00000394752 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
SFMBT1-201ENST00000394752 DAXXQ9UER7 740 aaPredicted RBP20.17■□□□□ 0.82
SFMBT1-201ENST00000394752 TIMELESSQ9UNS1 1208 aa20.15■□□□□ 0.82
SFMBT1-201ENST00000394752 GRIN2BQ13224 1484 aa20.15■□□□□ 0.82
SFMBT1-201ENST00000394752 SALL2Q9Y467 1007 aaPredicted RBP20.15■□□□□ 0.82
SFMBT1-201ENST00000394752 PRDM2Q13029 1718 aa20.15■□□□□ 0.82
SFMBT1-201ENST00000394752 CARMIL2Q6F5E8 1435 aa20.15■□□□□ 0.82
SFMBT1-201ENST00000394752 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
SFMBT1-201ENST00000394752 PCF11O94913 1555 aaKnown RBP20.11■□□□□ 0.81
SFMBT1-201ENST00000394752 KDM2AQ9Y2K7 1162 aa20.11■□□□□ 0.81
SFMBT1-201ENST00000394752 MRS2Q9HD23 443 aa20.11■□□□□ 0.81
SFMBT1-201ENST00000394752 CCDC18Q5T9S5 1454 aa20.09■□□□□ 0.81
SFMBT1-201ENST00000394752 IFT140Q96RY7 1462 aa20.08■□□□□ 0.8
SFMBT1-201ENST00000394752 MYOM3Q5VTT5 1437 aa20.07■□□□□ 0.8
SFMBT1-201ENST00000394752 EIF4G2P78344 907 aaKnown RBP eCLIP20.06■□□□□ 0.8
SFMBT1-201ENST00000394752 JPH4Q96JJ6 628 aa20.06■□□□□ 0.8
SFMBT1-201ENST00000394752 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
SFMBT1-201ENST00000394752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.8
SFMBT1-201ENST00000394752 NCOA2Q15596 1464 aa20.05■□□□□ 0.8
SFMBT1-201ENST00000394752 KCNH8Q96L42 1107 aa20.03■□□□□ 0.8
SFMBT1-201ENST00000394752 RTL5Q5HYW3 569 aaPredicted RBP20.01■□□□□ 0.79
SFMBT1-201ENST00000394752 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
SFMBT1-201ENST00000394752 PPP1R15AO75807 674 aaPredicted RBP20■□□□□ 0.79
SFMBT1-201ENST00000394752 FOXD1Q16676 465 aa19.97■□□□□ 0.79
SFMBT1-201ENST00000394752 TMC1Q8TDI8 760 aa19.97■□□□□ 0.79
SFMBT1-201ENST00000394752 MPHOSPH9Q99550 1183 aa19.97■□□□□ 0.79
SFMBT1-201ENST00000394752 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
SFMBT1-201ENST00000394752 EHBP1L1Q8N3D4 1523 aa19.94■□□□□ 0.78
SFMBT1-201ENST00000394752 NPM2Q86SE8 214 aaKnown RBP19.93■□□□□ 0.78
SFMBT1-201ENST00000394752 IQGAP2Q13576 1575 aa19.93■□□□□ 0.78
SFMBT1-201ENST00000394752 HECW1Q76N89 1606 aa19.89■□□□□ 0.78
SFMBT1-201ENST00000394752 RGL3Q3MIN7 710 aa19.89■□□□□ 0.77
SFMBT1-201ENST00000394752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.89■□□□□ 0.77
SFMBT1-201ENST00000394752 UACAQ9BZF9 1416 aa19.88■□□□□ 0.77
SFMBT1-201ENST00000394752 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
SFMBT1-201ENST00000394752 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
SFMBT1-201ENST00000394752 CTTNBP2Q8WZ74 1663 aa19.87■□□□□ 0.77
SFMBT1-201ENST00000394752 KIAA0586Q9BVV6 1533 aa19.86■□□□□ 0.77
SFMBT1-201ENST00000394752 ANKRD30AQ9BXX3 1397 aa19.85■□□□□ 0.77
SFMBT1-201ENST00000394752 SUPT6HQ7KZ85 1726 aaKnown RBP19.85■□□□□ 0.77
SFMBT1-201ENST00000394752 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
SFMBT1-201ENST00000394752 CCDC136Q96JN2 1154 aa19.85■□□□□ 0.77
SFMBT1-201ENST00000394752 ZNF644Q9H582 1327 aaPredicted RBP19.85■□□□□ 0.77
SFMBT1-201ENST00000394752 EPRSP07814 1512 aaKnown RBP19.84■□□□□ 0.77
SFMBT1-201ENST00000394752 CHGAP10645 457 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms