RNA–Protein interactions for RNA: ENST00000393125.6

GRIA4-202, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best) BASIC

Gene GRIA4, Length 2,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-202ENST00000393125 FANCD2Q9BXW9 1451 aa18.9■□□□□ 0.62
GRIA4-202ENST00000393125 PHLDB1Q86UU1 1377 aa18.9■□□□□ 0.62
GRIA4-202ENST00000393125 FHOD3Q2V2M9 1422 aa18.89■□□□□ 0.62
GRIA4-202ENST00000393125 CC2D2AQ9P2K1 1620 aa18.89■□□□□ 0.61
GRIA4-202ENST00000393125 KCNH8Q96L42 1107 aa18.85■□□□□ 0.61
GRIA4-202ENST00000393125 DNAJC5BQ9UF47 199 aa18.84■□□□□ 0.61
GRIA4-202ENST00000393125 LRRC9Q6ZRR7 1453 aa18.83■□□□□ 0.6
GRIA4-202ENST00000393125 TIAM1Q13009 1591 aa18.82■□□□□ 0.6
GRIA4-202ENST00000393125 DDX10Q13206 875 aaKnown RBP18.81■□□□□ 0.6
GRIA4-202ENST00000393125 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
GRIA4-202ENST00000393125 SETD5Q9C0A6 1442 aa18.8■□□□□ 0.6
GRIA4-202ENST00000393125 ARID3CA6NKF2 412 aa18.79■□□□□ 0.6
GRIA4-202ENST00000393125 FHAD1B1AJZ9 1412 aa18.77■□□□□ 0.6
GRIA4-202ENST00000393125 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
GRIA4-202ENST00000393125 PCF11O94913 1555 aaKnown RBP18.73■□□□□ 0.59
GRIA4-202ENST00000393125 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
GRIA4-202ENST00000393125 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
GRIA4-202ENST00000393125 MAPKBP1O60336 1514 aa18.71■□□□□ 0.59
GRIA4-202ENST00000393125 MTUS2Q5JR59 1369 aa18.69■□□□□ 0.58
GRIA4-202ENST00000393125 CHIC2Q9UKJ5 165 aa18.67■□□□□ 0.58
GRIA4-202ENST00000393125 DNMBPQ6XZF7 1577 aa18.65■□□□□ 0.58
GRIA4-202ENST00000393125 ABCA10Q8WWZ4 1543 aa18.65■□□□□ 0.58
GRIA4-202ENST00000393125 WDR97A6NE52 1622 aa18.64■□□□□ 0.57
GRIA4-202ENST00000393125 SUPT16HQ9Y5B9 1047 aaKnown RBP18.63■□□□□ 0.57
GRIA4-202ENST00000393125 MAP3K1Q13233 1512 aa18.62■□□□□ 0.57
GRIA4-202ENST00000393125 BCANQ96GW7 911 aa18.62■□□□□ 0.57
GRIA4-202ENST00000393125 RRP7BPQ9NSQ0 103 aa18.61■□□□□ 0.57
GRIA4-202ENST00000393125 CASKIN1Q8WXD9 1431 aa18.6■□□□□ 0.57
GRIA4-202ENST00000393125 URB2Q14146 1524 aaKnown RBP18.6■□□□□ 0.57
GRIA4-202ENST00000393125 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.57
GRIA4-202ENST00000393125 FYCO1Q9BQS8 1478 aa18.57■□□□□ 0.56
GRIA4-202ENST00000393125 FMN1Q68DA7 1419 aa18.57■□□□□ 0.56
GRIA4-202ENST00000393125 TRIM52Q96A61 297 aa18.57■□□□□ 0.56
GRIA4-202ENST00000393125 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
GRIA4-202ENST00000393125 FGD6Q6ZV73 1430 aa18.56■□□□□ 0.56
GRIA4-202ENST00000393125 GAPVD1Q14C86 1478 aa18.54■□□□□ 0.56
GRIA4-202ENST00000393125 PTPRKQ15262 1439 aa18.53■□□□□ 0.56
GRIA4-202ENST00000393125 CFAP43Q8NDM7 1665 aa18.52■□□□□ 0.56
GRIA4-202ENST00000393125 EFCAB5A4FU69 1503 aa18.5■□□□□ 0.55
GRIA4-202ENST00000393125 ANP32CO43423 234 aa18.49■□□□□ 0.55
GRIA4-202ENST00000393125 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
GRIA4-202ENST00000393125 FOXD1Q16676 465 aa18.48■□□□□ 0.55
GRIA4-202ENST00000393125 PDS5BQ9NTI5 1447 aa18.47■□□□□ 0.55
GRIA4-202ENST00000393125 CUL7Q14999 1698 aa18.46■□□□□ 0.55
GRIA4-202ENST00000393125 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
GRIA4-202ENST00000393125 SNAPC4Q5SXM2 1469 aa18.46■□□□□ 0.55
GRIA4-202ENST00000393125 FKBP8Q14318 412 aa18.46■□□□□ 0.55
GRIA4-202ENST00000393125 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.55
GRIA4-202ENST00000393125 CTTNBP2Q8WZ74 1663 aa18.45■□□□□ 0.54
GRIA4-202ENST00000393125 TIMELESSQ9UNS1 1208 aa18.43■□□□□ 0.54
GRIA4-202ENST00000393125 MYOM3Q5VTT5 1437 aa18.41■□□□□ 0.54
GRIA4-202ENST00000393125 LAMC3Q9Y6N6 1575 aa18.4■□□□□ 0.54
GRIA4-202ENST00000393125 NAIPQ13075 1403 aa18.39■□□□□ 0.53
GRIA4-202ENST00000393125 CNGB1Q14028 1251 aaPredicted RBP18.38■□□□□ 0.53
GRIA4-202ENST00000393125 HFM1A2PYH4 1435 aa18.38■□□□□ 0.53
GRIA4-202ENST00000393125 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.38■□□□□ 0.53
GRIA4-202ENST00000393125 UACAQ9BZF9 1416 aa18.37■□□□□ 0.53
GRIA4-202ENST00000393125 FBLN2P98095 1184 aa18.36■□□□□ 0.53
GRIA4-202ENST00000393125 GRIN2BQ13224 1484 aa18.35■□□□□ 0.53
GRIA4-202ENST00000393125 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
GRIA4-202ENST00000393125 KIF21AQ7Z4S6 1674 aa18.33■□□□□ 0.53
GRIA4-202ENST00000393125 LRRIQ1Q96JM4 1722 aa18.33■□□□□ 0.53
GRIA4-202ENST00000393125 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.53
GRIA4-202ENST00000393125 MAGI3Q5TCQ9 1506 aa18.33■□□□□ 0.52
GRIA4-202ENST00000393125 PTPN23Q9H3S7 1636 aa18.33■□□□□ 0.52
GRIA4-202ENST00000393125 CDK13Q14004 1512 aaKnown RBP18.32■□□□□ 0.52
GRIA4-202ENST00000393125 NEFLP07196 543 aa18.31■□□□□ 0.52
GRIA4-202ENST00000393125 HSPA5P11021 654 aaKnown RBP18.31■□□□□ 0.52
GRIA4-202ENST00000393125 MPHOSPH9Q99550 1183 aa18.3■□□□□ 0.52
GRIA4-202ENST00000393125 TSHZ2Q9NRE2 1034 aa18.3■□□□□ 0.52
GRIA4-202ENST00000393125 ZNF777Q9ULD5 760 aaPredicted RBP18.3■□□□□ 0.52
GRIA4-202ENST00000393125 SAMD9Q5K651 1589 aa18.3■□□□□ 0.52
GRIA4-202ENST00000393125 HNRNPUQ00839 825 aaKnown RBP eCLIP18.28■□□□□ 0.52
GRIA4-202ENST00000393125 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
GRIA4-202ENST00000393125 L3MBTL2Q969R5 705 aa18.27■□□□□ 0.52
GRIA4-202ENST00000393125 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.52
GRIA4-202ENST00000393125 CCER2I3L3R5 266 aa18.26■□□□□ 0.51
GRIA4-202ENST00000393125 EHBP1L1Q8N3D4 1523 aa18.26■□□□□ 0.51
GRIA4-202ENST00000393125 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
GRIA4-202ENST00000393125 ZNF326Q5BKZ1 582 aaKnown RBP18.24■□□□□ 0.51
GRIA4-202ENST00000393125 EPRSP07814 1512 aaKnown RBP18.24■□□□□ 0.51
GRIA4-202ENST00000393125 ZNF608Q9ULD9 1512 aaPredicted RBP18.24■□□□□ 0.51
GRIA4-202ENST00000393125 WASHC2AQ641Q2 1341 aa18.24■□□□□ 0.51
GRIA4-202ENST00000393125 UGGT2Q9NYU1 1516 aa18.23■□□□□ 0.51
GRIA4-202ENST00000393125 EIF4G2P78344 907 aaKnown RBP eCLIP18.23■□□□□ 0.51
GRIA4-202ENST00000393125 SLC4A1APQ9BWU0 796 aaKnown RBP18.22■□□□□ 0.51
GRIA4-202ENST00000393125 TARBP1Q13395 1621 aaKnown RBP18.22■□□□□ 0.51
GRIA4-202ENST00000393125 KDM6BO15054 1643 aa18.2■□□□□ 0.5
GRIA4-202ENST00000393125 IQGAP2Q13576 1575 aa18.2■□□□□ 0.5
GRIA4-202ENST00000393125 C11orf95C9JLR9 678 aaPredicted RBP18.19■□□□□ 0.5
GRIA4-202ENST00000393125 THOC2Q8NI27 1593 aaKnown RBP18.19■□□□□ 0.5
GRIA4-202ENST00000393125 CCDC184Q52MB2 194 aa18.18■□□□□ 0.5
GRIA4-202ENST00000393125 FAM9BQ8IZU0 186 aa18.18■□□□□ 0.5
GRIA4-202ENST00000393125 CHMP7Q8WUX9 453 aaPredicted RBP18.18■□□□□ 0.5
GRIA4-202ENST00000393125 SENP3-EIF4A1A0A087X0R7 540 aa18.17■□□□□ 0.5
GRIA4-202ENST00000393125 NBPF8Q3BBV2 869 aa18.15■□□□□ 0.5
GRIA4-202ENST00000393125 HECW1Q76N89 1606 aa18.15■□□□□ 0.5
GRIA4-202ENST00000393125 DENND4BO75064 1496 aaPredicted RBP18.15■□□□□ 0.5
GRIA4-202ENST00000393125 CFDP1Q9UEE9 299 aaPredicted RBP18.15■□□□□ 0.5
GRIA4-202ENST00000393125 CDK11AQ9UQ88 783 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms