RNA–Protein interactions for RNA: ENST00000392467.7

TMC6-203, Transcript of transmembrane channel like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC6, Length 2,833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-203ENST00000392467 IGF1RP08069 1367 aa26.31■■□□□ 1.8
TMC6-203ENST00000392467 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
TMC6-203ENST00000392467 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
TMC6-203ENST00000392467 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.78
TMC6-203ENST00000392467 CCNB3Q8WWL7 1395 aa26.19■■□□□ 1.78
TMC6-203ENST00000392467 DDX10Q13206 875 aaKnown RBP26.18■■□□□ 1.78
TMC6-203ENST00000392467 ABCA10Q8WWZ4 1543 aa26.18■■□□□ 1.78
TMC6-203ENST00000392467 PDS5BQ9NTI5 1447 aa26.18■■□□□ 1.78
TMC6-203ENST00000392467 RRBP1Q9P2E9 1410 aaKnown RBP26.17■■□□□ 1.78
TMC6-203ENST00000392467 CARMIL1Q5VZK9 1371 aa26.16■■□□□ 1.78
TMC6-203ENST00000392467 HIRIP3Q9BW71 556 aaPredicted RBP26.16■■□□□ 1.78
TMC6-203ENST00000392467 FKBP8Q14318 412 aa26.14■■□□□ 1.77
TMC6-203ENST00000392467 SIN3AQ96ST3 1273 aa26.12■■□□□ 1.77
TMC6-203ENST00000392467 RAB3GAP2Q9H2M9 1393 aa26.12■■□□□ 1.77
TMC6-203ENST00000392467 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
TMC6-203ENST00000392467 ANP32EQ9BTT0 268 aa26.07■■□□□ 1.76
TMC6-203ENST00000392467 ARHGAP35Q9NRY4 1499 aa26.06■■□□□ 1.76
TMC6-203ENST00000392467 FAM50AQ14320 339 aaKnown RBP26.03■■□□□ 1.76
TMC6-203ENST00000392467 WDR97A6NE52 1622 aa26.02■■□□□ 1.76
TMC6-203ENST00000392467 TRIM52Q96A61 297 aa26.01■■□□□ 1.75
TMC6-203ENST00000392467 ATP1B4Q9UN42 357 aaPredicted RBP26■■□□□ 1.75
TMC6-203ENST00000392467 MAPKBP1O60336 1514 aa25.99■■□□□ 1.75
TMC6-203ENST00000392467 P3H3Q8IVL6 736 aa25.95■■□□□ 1.74
TMC6-203ENST00000392467 TDRD9Q8NDG6 1382 aaKnown RBP25.93■■□□□ 1.74
TMC6-203ENST00000392467 CUL7Q14999 1698 aa25.93■■□□□ 1.74
TMC6-203ENST00000392467 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
TMC6-203ENST00000392467 SETD5Q9C0A6 1442 aa25.88■■□□□ 1.73
TMC6-203ENST00000392467 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
TMC6-203ENST00000392467 NEFLP07196 543 aa25.86■■□□□ 1.73
TMC6-203ENST00000392467 PHLDB1Q86UU1 1377 aa25.86■■□□□ 1.73
TMC6-203ENST00000392467 TARBP1Q13395 1621 aaKnown RBP25.85■■□□□ 1.73
TMC6-203ENST00000392467 PPP1R15AO75807 674 aaPredicted RBP25.83■■□□□ 1.73
TMC6-203ENST00000392467 MRC2Q9UBG0 1479 aa25.82■■□□□ 1.72
TMC6-203ENST00000392467 RBM19Q9Y4C8 960 aaKnown RBP25.8■■□□□ 1.72
TMC6-203ENST00000392467 ANP32CO43423 234 aa25.77■■□□□ 1.72
TMC6-203ENST00000392467 CTTNBP2Q8WZ74 1663 aa25.76■■□□□ 1.71
TMC6-203ENST00000392467 TIAM1Q13009 1591 aa25.75■■□□□ 1.71
TMC6-203ENST00000392467 LRRC9Q6ZRR7 1453 aa25.72■■□□□ 1.71
TMC6-203ENST00000392467 IRX6P78412 446 aaPredicted RBP25.7■■□□□ 1.71
TMC6-203ENST00000392467 BCL11AQ9H165 835 aa25.69■■□□□ 1.7
TMC6-203ENST00000392467 FHOD3Q2V2M9 1422 aa25.68■■□□□ 1.7
TMC6-203ENST00000392467 EFCAB5A4FU69 1503 aa25.68■■□□□ 1.7
TMC6-203ENST00000392467 FHAD1B1AJZ9 1412 aa25.67■■□□□ 1.7
TMC6-203ENST00000392467 AQRO60306 1485 aaKnown RBP eCLIP25.67■■□□□ 1.72e-10■■■■■ 35.2
TMC6-203ENST00000392467 WDR62O43379 1518 aa25.66■■□□□ 1.7
TMC6-203ENST00000392467 MAP3K1Q13233 1512 aa25.64■■□□□ 1.7
TMC6-203ENST00000392467 PBRM1Q86U86 1689 aa25.64■■□□□ 1.7
TMC6-203ENST00000392467 PCF11O94913 1555 aaKnown RBP25.64■■□□□ 1.69
TMC6-203ENST00000392467 CCER2I3L3R5 266 aa25.61■■□□□ 1.69
TMC6-203ENST00000392467 IFT140Q96RY7 1462 aa25.58■■□□□ 1.69
TMC6-203ENST00000392467 TONSLQ96HA7 1378 aa25.57■■□□□ 1.68
TMC6-203ENST00000392467 ZNF608Q9ULD9 1512 aaPredicted RBP25.57■■□□□ 1.68
TMC6-203ENST00000392467 HNRNPUQ00839 825 aaKnown RBP eCLIP25.56■■□□□ 1.68
TMC6-203ENST00000392467 ERCC6Q03468 1493 aa25.55■■□□□ 1.68
TMC6-203ENST00000392467 MSH5O43196 834 aa25.55■■□□□ 1.68
TMC6-203ENST00000392467 ADAMTS12P58397 1594 aa25.54■■□□□ 1.68
TMC6-203ENST00000392467 SAMD9Q5K651 1589 aa25.54■■□□□ 1.68
TMC6-203ENST00000392467 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
TMC6-203ENST00000392467 CFAP43Q8NDM7 1665 aa25.53■■□□□ 1.68
TMC6-203ENST00000392467 FYCO1Q9BQS8 1478 aa25.53■■□□□ 1.68
TMC6-203ENST00000392467 CASKIN1Q8WXD9 1431 aa25.52■■□□□ 1.68
TMC6-203ENST00000392467 TIMELESSQ9UNS1 1208 aa25.51■■□□□ 1.67
TMC6-203ENST00000392467 FMN1Q68DA7 1419 aa25.49■■□□□ 1.67
TMC6-203ENST00000392467 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
TMC6-203ENST00000392467 SNAPC4Q5SXM2 1469 aa25.46■■□□□ 1.67
TMC6-203ENST00000392467 EIF4G3O43432 1585 aaKnown RBP25.41■■□□□ 1.66
TMC6-203ENST00000392467 IQGAP2Q13576 1575 aa25.39■■□□□ 1.65
TMC6-203ENST00000392467 CCDC18Q5T9S5 1454 aa25.38■■□□□ 1.65
TMC6-203ENST00000392467 PTPRKQ15262 1439 aa25.37■■□□□ 1.65
TMC6-203ENST00000392467 CDK11AQ9UQ88 783 aaPredicted RBP25.36■■□□□ 1.65
TMC6-203ENST00000392467 CCDC184Q52MB2 194 aa25.35■■□□□ 1.65
TMC6-203ENST00000392467 LRRIQ1Q96JM4 1722 aa25.33■■□□□ 1.65
TMC6-203ENST00000392467 FGD6Q6ZV73 1430 aa25.33■■□□□ 1.65
TMC6-203ENST00000392467 CHIC2Q9UKJ5 165 aa25.33■■□□□ 1.65
TMC6-203ENST00000392467 MTUS2Q5JR59 1369 aa25.32■■□□□ 1.64
TMC6-203ENST00000392467 ERICH6Q7L0X2 663 aa25.32■■□□□ 1.64
TMC6-203ENST00000392467 RRP7BPQ9NSQ0 103 aa25.31■■□□□ 1.64
TMC6-203ENST00000392467 HSPA5P11021 654 aaKnown RBP25.3■■□□□ 1.64
TMC6-203ENST00000392467 WASHC2AQ641Q2 1341 aa25.29■■□□□ 1.64
TMC6-203ENST00000392467 FAM9BQ8IZU0 186 aa25.27■■□□□ 1.64
TMC6-203ENST00000392467 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
TMC6-203ENST00000392467 UACAQ9BZF9 1416 aa25.26■■□□□ 1.63
TMC6-203ENST00000392467 CNGB1Q14028 1251 aaPredicted RBP25.25■■□□□ 1.63
TMC6-203ENST00000392467 UGGT2Q9NYU1 1516 aa25.25■■□□□ 1.63
TMC6-203ENST00000392467 KIAA0586Q9BVV6 1533 aa25.23■■□□□ 1.63
TMC6-203ENST00000392467 MAGI1Q96QZ7 1491 aaPredicted RBP25.23■■□□□ 1.63
TMC6-203ENST00000392467 B4GALNT3Q6L9W6 998 aa25.22■■□□□ 1.63
TMC6-203ENST00000392467 HFM1A2PYH4 1435 aa25.21■■□□□ 1.63
TMC6-203ENST00000392467 FOXD1Q16676 465 aa25.21■■□□□ 1.63
TMC6-203ENST00000392467 NAIPQ13075 1403 aa25.2■■□□□ 1.62
TMC6-203ENST00000392467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.19■■□□□ 1.623e-7■■■■□ 23.7
TMC6-203ENST00000392467 PTPN23Q9H3S7 1636 aa25.19■■□□□ 1.62
TMC6-203ENST00000392467 FANCIQ9NVI1 1328 aa25.18■■□□□ 1.62
TMC6-203ENST00000392467 SYNJ2O15056 1496 aa25.16■■□□□ 1.62
TMC6-203ENST00000392467 DISP1Q96F81 1524 aa25.16■■□□□ 1.62
TMC6-203ENST00000392467 SENP3-EIF4A1A0A087X0R7 540 aa25.16■■□□□ 1.62
TMC6-203ENST00000392467 ARID3CA6NKF2 412 aa25.16■■□□□ 1.62
TMC6-203ENST00000392467 C11orf95C9JLR9 678 aaPredicted RBP25.16■■□□□ 1.62
TMC6-203ENST00000392467 HECW1Q76N89 1606 aa25.15■■□□□ 1.62
TMC6-203ENST00000392467 CHMP7Q8WUX9 453 aaPredicted RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms