RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 IFT140Q96RY7 1462 aa17.14■□□□□ 0.33
CCDC57-205ENST00000392346 RAPGEF2Q9Y4G8 1499 aa17.14■□□□□ 0.33
CCDC57-205ENST00000392346 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
CCDC57-205ENST00000392346 OSCARQ8IYS5 282 aa17.11■□□□□ 0.33
CCDC57-205ENST00000392346 ITGAEP38570 1179 aa17.07■□□□□ 0.32
CCDC57-205ENST00000392346 EEA1Q15075 1411 aa17.06■□□□□ 0.32
CCDC57-205ENST00000392346 ZNF608Q9ULD9 1512 aaPredicted RBP17.05■□□□□ 0.32
CCDC57-205ENST00000392346 KANK4Q5T7N3 995 aaPredicted RBP17.03■□□□□ 0.32
CCDC57-205ENST00000392346 POLA1P09884 1462 aaPredicted RBP17.01■□□□□ 0.31
CCDC57-205ENST00000392346 VPS8Q8N3P4 1428 aa17.01■□□□□ 0.31
CCDC57-205ENST00000392346 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCDC57-205ENST00000392346 FBLN2P98095 1184 aa16.96■□□□□ 0.31
CCDC57-205ENST00000392346 EIF4G3O43432 1585 aaKnown RBP16.96■□□□□ 0.31
CCDC57-205ENST00000392346 KIF21BO75037 1637 aa16.96■□□□□ 0.31
CCDC57-205ENST00000392346 TULP1O00294 542 aaPredicted RBP16.95■□□□□ 0.3
CCDC57-205ENST00000392346 RAD54L2Q9Y4B4 1467 aa16.95■□□□□ 0.3
CCDC57-205ENST00000392346 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
CCDC57-205ENST00000392346 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
CCDC57-205ENST00000392346 TDRD9Q8NDG6 1382 aaKnown RBP16.93■□□□□ 0.3
CCDC57-205ENST00000392346 CUX1P39880 1505 aa16.92■□□□□ 0.3
CCDC57-205ENST00000392346 KCNH8Q96L42 1107 aa16.86■□□□□ 0.29
CCDC57-205ENST00000392346 DHX57Q6P158 1386 aaKnown RBP16.86■□□□□ 0.29
CCDC57-205ENST00000392346 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
CCDC57-205ENST00000392346 CHMP7Q8WUX9 453 aaPredicted RBP16.84■□□□□ 0.29
CCDC57-205ENST00000392346 ARAP1Q96P48 1450 aa16.83■□□□□ 0.29
CCDC57-205ENST00000392346 ARXQ96QS3 562 aa16.83■□□□□ 0.28
CCDC57-205ENST00000392346 WDR97A6NE52 1622 aa16.83■□□□□ 0.28
CCDC57-205ENST00000392346 GRIN2BQ13224 1484 aa16.8■□□□□ 0.28
CCDC57-205ENST00000392346 CHD1O14646 1710 aa16.79■□□□□ 0.28
CCDC57-205ENST00000392346 SNAPC4Q5SXM2 1469 aa16.79■□□□□ 0.28
CCDC57-205ENST00000392346 GAPVD1Q14C86 1478 aa16.78■□□□□ 0.28
CCDC57-205ENST00000392346 P3H3Q8IVL6 736 aa16.77■□□□□ 0.28
CCDC57-205ENST00000392346 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.28
CCDC57-205ENST00000392346 MAGI1Q96QZ7 1491 aaPredicted RBP16.77■□□□□ 0.27
CCDC57-205ENST00000392346 TOP2BQ02880 1626 aa16.76■□□□□ 0.27
CCDC57-205ENST00000392346 ATP1B4Q9UN42 357 aaPredicted RBP16.76■□□□□ 0.27
CCDC57-205ENST00000392346 ABCA10Q8WWZ4 1543 aa16.75■□□□□ 0.27
CCDC57-205ENST00000392346 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
CCDC57-205ENST00000392346 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
CCDC57-205ENST00000392346 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
CCDC57-205ENST00000392346 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
CCDC57-205ENST00000392346 BCANQ96GW7 911 aa16.72■□□□□ 0.27
CCDC57-205ENST00000392346 CYB5RLQ6IPT4 315 aa16.71■□□□□ 0.27
CCDC57-205ENST00000392346 SYNJ2O15056 1496 aa16.71■□□□□ 0.27
CCDC57-205ENST00000392346 PRXQ9BXM0 1461 aa16.7■□□□□ 0.26
CCDC57-205ENST00000392346 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
CCDC57-205ENST00000392346 SUPT16HQ9Y5B9 1047 aaKnown RBP16.69■□□□□ 0.26
CCDC57-205ENST00000392346 SIN3AQ96ST3 1273 aa16.68■□□□□ 0.26
CCDC57-205ENST00000392346 PBRM1Q86U86 1689 aa16.68■□□□□ 0.26
CCDC57-205ENST00000392346 ABCA5Q8WWZ7 1642 aa16.66■□□□□ 0.26
CCDC57-205ENST00000392346 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
CCDC57-205ENST00000392346 FAM50AQ14320 339 aaKnown RBP16.65■□□□□ 0.26
CCDC57-205ENST00000392346 CCNB3Q8WWL7 1395 aa16.64■□□□□ 0.25
CCDC57-205ENST00000392346 KCNA4P22459 653 aa16.62■□□□□ 0.25
CCDC57-205ENST00000392346 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
CCDC57-205ENST00000392346 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
CCDC57-205ENST00000392346 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
CCDC57-205ENST00000392346 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.24
CCDC57-205ENST00000392346 RRBP1Q9P2E9 1410 aaKnown RBP16.58■□□□□ 0.24
CCDC57-205ENST00000392346 CLASP1Q7Z460 1538 aa16.57■□□□□ 0.24
CCDC57-205ENST00000392346 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
CCDC57-205ENST00000392346 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
CCDC57-205ENST00000392346 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
CCDC57-205ENST00000392346 ADAMTS12P58397 1594 aa16.53■□□□□ 0.24
CCDC57-205ENST00000392346 MAPKBP1O60336 1514 aa16.52■□□□□ 0.24
CCDC57-205ENST00000392346 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
CCDC57-205ENST00000392346 TRIM52Q96A61 297 aa16.5■□□□□ 0.23
CCDC57-205ENST00000392346 CLSPNQ9HAW4 1339 aa16.49■□□□□ 0.23
CCDC57-205ENST00000392346 IGF1RP08069 1367 aa16.49■□□□□ 0.23
CCDC57-205ENST00000392346 TSHZ2Q9NRE2 1034 aa16.48■□□□□ 0.23
CCDC57-205ENST00000392346 NUP160Q12769 1436 aa16.47■□□□□ 0.23
CCDC57-205ENST00000392346 AMER1Q5JTC6 1135 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-205ENST00000392346 FKBP8Q14318 412 aa16.44■□□□□ 0.22
CCDC57-205ENST00000392346 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
CCDC57-205ENST00000392346 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
CCDC57-205ENST00000392346 CEP170Q5SW79 1584 aa16.44■□□□□ 0.22
CCDC57-205ENST00000392346 JPH4Q96JJ6 628 aa16.42■□□□□ 0.22
CCDC57-205ENST00000392346 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
CCDC57-205ENST00000392346 SETD5Q9C0A6 1442 aa16.4■□□□□ 0.22
CCDC57-205ENST00000392346 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
CCDC57-205ENST00000392346 LRRC9Q6ZRR7 1453 aa16.39■□□□□ 0.21
CCDC57-205ENST00000392346 HOMEZQ8IX15 550 aa16.38■□□□□ 0.21
CCDC57-205ENST00000392346 ARID3CA6NKF2 412 aa16.38■□□□□ 0.21
CCDC57-205ENST00000392346 ANO8Q9HCE9 1232 aaPredicted RBP16.38■□□□□ 0.21
CCDC57-205ENST00000392346 PCF11O94913 1555 aaKnown RBP16.37■□□□□ 0.21
CCDC57-205ENST00000392346 CUL7Q14999 1698 aa16.36■□□□□ 0.21
CCDC57-205ENST00000392346 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
CCDC57-205ENST00000392346 IRX6P78412 446 aaPredicted RBP16.35■□□□□ 0.21
CCDC57-205ENST00000392346 PDIA4P13667 645 aaKnown RBP16.34■□□□□ 0.21
CCDC57-205ENST00000392346 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.21
CCDC57-205ENST00000392346 SHROOM2Q13796 1616 aa16.33■□□□□ 0.2
CCDC57-205ENST00000392346 UBE2Q2Q8WVN8 375 aa16.32■□□□□ 0.2
CCDC57-205ENST00000392346 KIAA0586Q9BVV6 1533 aa16.3■□□□□ 0.2
CCDC57-205ENST00000392346 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
CCDC57-205ENST00000392346 TPRNQ4KMQ1 711 aa16.29■□□□□ 0.2
CCDC57-205ENST00000392346 NPM1P06748 294 aaKnown RBP eCLIP16.29■□□□□ 0.2
CCDC57-205ENST00000392346 CHIC2Q9UKJ5 165 aa16.29■□□□□ 0.2
CCDC57-205ENST00000392346 CNGB1Q14028 1251 aaPredicted RBP16.27■□□□□ 0.2
CCDC57-205ENST00000392346 PTPRKQ15262 1439 aa16.25■□□□□ 0.19
CCDC57-205ENST00000392346 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms