RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 CADPSQ9ULU8 1353 aa30.17■■■□□ 2.42
COL23A1-201ENST00000390654 FGD5Q6ZNL6 1462 aa30.13■■■□□ 2.41
COL23A1-201ENST00000390654 PHLDB1Q86UU1 1377 aa30.09■■■□□ 2.41
COL23A1-201ENST00000390654 RAD54L2Q9Y4B4 1467 aa30.03■■■□□ 2.4
COL23A1-201ENST00000390654 MAPKBP1O60336 1514 aa30.03■■■□□ 2.4
COL23A1-201ENST00000390654 SETD5Q9C0A6 1442 aa30.02■■■□□ 2.4
COL23A1-201ENST00000390654 MYT1Q01538 1121 aa30■■■□□ 2.39
COL23A1-201ENST00000390654 FHOD3Q2V2M9 1422 aa29.96■■■□□ 2.39
COL23A1-201ENST00000390654 TIAM1Q13009 1591 aa29.96■■■□□ 2.39
COL23A1-201ENST00000390654 NESP48681 1621 aa29.96■■■□□ 2.39
COL23A1-201ENST00000390654 LRRC9Q6ZRR7 1453 aa29.95■■■□□ 2.38
COL23A1-201ENST00000390654 WDR97A6NE52 1622 aa29.93■■■□□ 2.38
COL23A1-201ENST00000390654 FANCD2Q9BXW9 1451 aa29.92■■■□□ 2.38
COL23A1-201ENST00000390654 TSHZ2Q9NRE2 1034 aa29.92■■■□□ 2.38
COL23A1-201ENST00000390654 TRIM52Q96A61 297 aa29.9■■■□□ 2.38
COL23A1-201ENST00000390654 FKBP8Q14318 412 aa29.9■■■□□ 2.38
COL23A1-201ENST00000390654 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.38
COL23A1-201ENST00000390654 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
COL23A1-201ENST00000390654 ARID3CA6NKF2 412 aa29.84■■■□□ 2.37
COL23A1-201ENST00000390654 TDRD9Q8NDG6 1382 aaKnown RBP29.79■■■□□ 2.36
COL23A1-201ENST00000390654 FHAD1B1AJZ9 1412 aa29.76■■■□□ 2.36
COL23A1-201ENST00000390654 PCF11O94913 1555 aaKnown RBP29.76■■■□□ 2.35
COL23A1-201ENST00000390654 PPP1R15AO75807 674 aaPredicted RBP29.75■■■□□ 2.35
COL23A1-201ENST00000390654 POLA1P09884 1462 aaPredicted RBP29.71■■■□□ 2.35
COL23A1-201ENST00000390654 ANP32CO43423 234 aa29.7■■■□□ 2.34
COL23A1-201ENST00000390654 MAP3K1Q13233 1512 aa29.67■■■□□ 2.34
COL23A1-201ENST00000390654 TOPBP1Q92547 1522 aa29.65■■■□□ 2.34
COL23A1-201ENST00000390654 PRDM2Q13029 1718 aa29.65■■■□□ 2.34
COL23A1-201ENST00000390654 TONSLQ96HA7 1378 aa29.64■■■□□ 2.34
COL23A1-201ENST00000390654 CHIC2Q9UKJ5 165 aa29.62■■■□□ 2.33
COL23A1-201ENST00000390654 MTUS2Q5JR59 1369 aa29.62■■■□□ 2.33
COL23A1-201ENST00000390654 NEFLP07196 543 aa29.6■■■□□ 2.33
COL23A1-201ENST00000390654 RRP7BPQ9NSQ0 103 aa29.53■■■□□ 2.32
COL23A1-201ENST00000390654 DNMBPQ6XZF7 1577 aa29.52■■■□□ 2.32
COL23A1-201ENST00000390654 PTPRKQ15262 1439 aa29.52■■■□□ 2.32
COL23A1-201ENST00000390654 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.31
COL23A1-201ENST00000390654 FGD6Q6ZV73 1430 aa29.5■■■□□ 2.31
COL23A1-201ENST00000390654 CFAP43Q8NDM7 1665 aa29.5■■■□□ 2.31
COL23A1-201ENST00000390654 TIMELESSQ9UNS1 1208 aa29.5■■■□□ 2.31
COL23A1-201ENST00000390654 CASKIN1Q8WXD9 1431 aa29.5■■■□□ 2.31
COL23A1-201ENST00000390654 IRX6P78412 446 aaPredicted RBP29.49■■■□□ 2.31
COL23A1-201ENST00000390654 CCDC18Q5T9S5 1454 aa29.47■■■□□ 2.31
COL23A1-201ENST00000390654 FYCO1Q9BQS8 1478 aa29.47■■■□□ 2.31
COL23A1-201ENST00000390654 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.3
COL23A1-201ENST00000390654 CCER2I3L3R5 266 aa29.43■■■□□ 2.3
COL23A1-201ENST00000390654 HNRNPUQ00839 825 aaKnown RBP eCLIP29.41■■■□□ 2.3
COL23A1-201ENST00000390654 ANP32EQ9BTT0 268 aa29.4■■■□□ 2.3
COL23A1-201ENST00000390654 AQRO60306 1485 aaKnown RBP eCLIP29.38■■■□□ 2.29
COL23A1-201ENST00000390654 FMN1Q68DA7 1419 aa29.37■■■□□ 2.29
COL23A1-201ENST00000390654 FOXD1Q16676 465 aa29.37■■■□□ 2.29
COL23A1-201ENST00000390654 GAPVD1Q14C86 1478 aa29.35■■■□□ 2.29
COL23A1-201ENST00000390654 RBM19Q9Y4C8 960 aaKnown RBP29.34■■■□□ 2.29
COL23A1-201ENST00000390654 UACAQ9BZF9 1416 aa29.32■■■□□ 2.28
COL23A1-201ENST00000390654 EFCAB5A4FU69 1503 aa29.31■■■□□ 2.28
COL23A1-201ENST00000390654 CNGB1Q14028 1251 aaPredicted RBP29.31■■■□□ 2.28
COL23A1-201ENST00000390654 NCOA2Q15596 1464 aa29.3■■■□□ 2.28
COL23A1-201ENST00000390654 HFM1A2PYH4 1435 aa29.3■■■□□ 2.28
COL23A1-201ENST00000390654 NAIPQ13075 1403 aa29.3■■■□□ 2.28
COL23A1-201ENST00000390654 HSPA5P11021 654 aaKnown RBP29.29■■■□□ 2.28
COL23A1-201ENST00000390654 SNAPC4Q5SXM2 1469 aa29.29■■■□□ 2.28
COL23A1-201ENST00000390654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.29■■■□□ 2.28
COL23A1-201ENST00000390654 MYOM3Q5VTT5 1437 aa29.24■■■□□ 2.27
COL23A1-201ENST00000390654 PTPN23Q9H3S7 1636 aa29.24■■■□□ 2.27
COL23A1-201ENST00000390654 WASHC2AQ641Q2 1341 aa29.23■■■□□ 2.27
COL23A1-201ENST00000390654 CCDC184Q52MB2 194 aa29.23■■■□□ 2.27
COL23A1-201ENST00000390654 CTTNBP2Q8WZ74 1663 aa29.22■■■□□ 2.27
COL23A1-201ENST00000390654 CUL7Q14999 1698 aa29.22■■■□□ 2.27
COL23A1-201ENST00000390654 PDS5BQ9NTI5 1447 aa29.19■■■□□ 2.26
COL23A1-201ENST00000390654 FAM9BQ8IZU0 186 aa29.17■■■□□ 2.26
COL23A1-201ENST00000390654 L3MBTL2Q969R5 705 aa29.14■■■□□ 2.25
COL23A1-201ENST00000390654 C11orf95C9JLR9 678 aaPredicted RBP29.12■■■□□ 2.25
COL23A1-201ENST00000390654 LRRIQ1Q96JM4 1722 aa29.12■■■□□ 2.25
COL23A1-201ENST00000390654 EIF4G2P78344 907 aaKnown RBP eCLIP29.12■■■□□ 2.25
COL23A1-201ENST00000390654 MPHOSPH9Q99550 1183 aa29.11■■■□□ 2.25
COL23A1-201ENST00000390654 SENP3-EIF4A1A0A087X0R7 540 aa29.1■■■□□ 2.25
COL23A1-201ENST00000390654 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
COL23A1-201ENST00000390654 LAMC3Q9Y6N6 1575 aa29.08■■■□□ 2.25
COL23A1-201ENST00000390654 MAGI3Q5TCQ9 1506 aa29.08■■■□□ 2.25
COL23A1-201ENST00000390654 FBLN2P98095 1184 aa29.08■■■□□ 2.25
COL23A1-201ENST00000390654 ZNF644Q9H582 1327 aaPredicted RBP29.06■■■□□ 2.24
COL23A1-201ENST00000390654 CDK13Q14004 1512 aaKnown RBP29.06■■■□□ 2.24
COL23A1-201ENST00000390654 KDM5BQ9UGL1 1544 aa29.05■■■□□ 2.24
COL23A1-201ENST00000390654 POLR3GLQ9BT43 218 aa29.05■■■□□ 2.24
COL23A1-201ENST00000390654 KIF21AQ7Z4S6 1674 aa29.04■■■□□ 2.24
COL23A1-201ENST00000390654 ABCA5Q8WWZ7 1642 aa29.04■■■□□ 2.24
COL23A1-201ENST00000390654 SUPT6HQ7KZ85 1726 aaKnown RBP29.02■■■□□ 2.24
COL23A1-201ENST00000390654 ZNF777Q9ULD5 760 aaPredicted RBP29.01■■■□□ 2.23
COL23A1-201ENST00000390654 KDM6BO15054 1643 aa29.01■■■□□ 2.23
COL23A1-201ENST00000390654 MRS2Q9HD23 443 aa29■■■□□ 2.23
COL23A1-201ENST00000390654 DENND4BO75064 1496 aaPredicted RBP29■■■□□ 2.23
COL23A1-201ENST00000390654 SAMD9Q5K651 1589 aa28.99■■■□□ 2.23
COL23A1-201ENST00000390654 MSH5O43196 834 aa28.98■■■□□ 2.23
COL23A1-201ENST00000390654 NBPF8Q3BBV2 869 aa28.98■■■□□ 2.23
COL23A1-201ENST00000390654 ZNF326Q5BKZ1 582 aaKnown RBP28.97■■■□□ 2.23
COL23A1-201ENST00000390654 EHBP1L1Q8N3D4 1523 aa28.97■■■□□ 2.23
COL23A1-201ENST00000390654 CDK11AQ9UQ88 783 aaPredicted RBP28.96■■■□□ 2.23
COL23A1-201ENST00000390654 UGGT2Q9NYU1 1516 aa28.96■■■□□ 2.23
COL23A1-201ENST00000390654 PRKRIP1Q9H875 184 aaPredicted RBP28.92■■■□□ 2.22
COL23A1-201ENST00000390654 SLC4A1APQ9BWU0 796 aaKnown RBP28.92■■■□□ 2.22
COL23A1-201ENST00000390654 B4GALNT3Q6L9W6 998 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms