RNA–Protein interactions for RNA: ENST00000390445.2

TRAV17-201, Transcript of T cell receptor alpha variable 17, humanhuman

APPRIS P1 BASIC

Gene TRAV17, Length 484 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17-201ENST00000390445 ABCC8Q09428 1581 aa15.29■□□□□ 0.04
TRAV17-201ENST00000390445 CHD1O14646 1710 aa15.29■□□□□ 0.04
TRAV17-201ENST00000390445 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
TRAV17-201ENST00000390445 MKRN4PQ13434 485 aaPredicted RBP15.24■□□□□ 0.03
TRAV17-201ENST00000390445 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
TRAV17-201ENST00000390445 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
TRAV17-201ENST00000390445 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
TRAV17-201ENST00000390445 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
TRAV17-201ENST00000390445 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
TRAV17-201ENST00000390445 AQRO60306 1485 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAV17-201ENST00000390445 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
TRAV17-201ENST00000390445 CUX1P39880 1505 aa15.18■□□□□ 0.02
TRAV17-201ENST00000390445 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
TRAV17-201ENST00000390445 FGD5Q6ZNL6 1462 aa15.16■□□□□ 0.02
TRAV17-201ENST00000390445 SUPT5HO00267 1087 aaKnown RBP15.16■□□□□ 0.02
TRAV17-201ENST00000390445 PBRM1Q86U86 1689 aa15.12■□□□□ 0.01
TRAV17-201ENST00000390445 SOGA1O94964 1423 aa15.12■□□□□ 0.01
TRAV17-201ENST00000390445 FBLN2P98095 1184 aa15.12■□□□□ 0.01
TRAV17-201ENST00000390445 ARHGEF11O15085 1522 aa15.11■□□□□ 0.01
TRAV17-201ENST00000390445 FKBP8Q14318 412 aa15.1■□□□□ 0.01
TRAV17-201ENST00000390445 TDRD9Q8NDG6 1382 aaKnown RBP15.1■□□□□ 0.01
TRAV17-201ENST00000390445 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
TRAV17-201ENST00000390445 SNAPC4Q5SXM2 1469 aa15.06■□□□□ 0
TRAV17-201ENST00000390445 ABCA5Q8WWZ7 1642 aa15.02□□□□□ -0.01
TRAV17-201ENST00000390445 BIVM-ERCC5R4GMW8 1640 aa15.01□□□□□ -0.01
TRAV17-201ENST00000390445 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
TRAV17-201ENST00000390445 CLASP1Q7Z460 1538 aa14.98□□□□□ -0.01
TRAV17-201ENST00000390445 GRIN2BQ13224 1484 aa14.98□□□□□ -0.01
TRAV17-201ENST00000390445 MAGI1Q96QZ7 1491 aaPredicted RBP14.98□□□□□ -0.01
TRAV17-201ENST00000390445 GAPVD1Q14C86 1478 aa14.96□□□□□ -0.01
TRAV17-201ENST00000390445 ARAP1Q96P48 1450 aa14.96□□□□□ -0.01
TRAV17-201ENST00000390445 TOP2BQ02880 1626 aa14.96□□□□□ -0.01
TRAV17-201ENST00000390445 ABCA10Q8WWZ4 1543 aa14.96□□□□□ -0.02
TRAV17-201ENST00000390445 SYNJ2O15056 1496 aa14.94□□□□□ -0.02
TRAV17-201ENST00000390445 CYB5RLQ6IPT4 315 aa14.93□□□□□ -0.02
TRAV17-201ENST00000390445 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
TRAV17-201ENST00000390445 CHMP7Q8WUX9 453 aaPredicted RBP14.91□□□□□ -0.02
TRAV17-201ENST00000390445 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
TRAV17-201ENST00000390445 ADAMTS12P58397 1594 aa14.89□□□□□ -0.03
TRAV17-201ENST00000390445 CEP170Q5SW79 1584 aa14.83□□□□□ -0.04
TRAV17-201ENST00000390445 GRIN2AQ12879 1464 aa14.82□□□□□ -0.04
TRAV17-201ENST00000390445 ERCC6L2Q5T890 1561 aa14.81□□□□□ -0.04
TRAV17-201ENST00000390445 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
TRAV17-201ENST00000390445 SHROOM2Q13796 1616 aa14.76□□□□□ -0.05
TRAV17-201ENST00000390445 SPDYE2BA6NHP3 402 aa14.75□□□□□ -0.05
TRAV17-201ENST00000390445 SPDYE6P0CI01 402 aa14.75□□□□□ -0.05
TRAV17-201ENST00000390445 SPDYE2Q495Y8 402 aa14.75□□□□□ -0.05
TRAV17-201ENST00000390445 NUP160Q12769 1436 aa14.75□□□□□ -0.05
TRAV17-201ENST00000390445 FHAD1B1AJZ9 1412 aa14.74□□□□□ -0.05
TRAV17-201ENST00000390445 PROM2Q8N271 834 aa14.72□□□□□ -0.05
TRAV17-201ENST00000390445 ZNF692Q9BU19 519 aaPredicted RBP14.72□□□□□ -0.05
TRAV17-201ENST00000390445 SSUH2Q9Y2M2 353 aa14.69□□□□□ -0.06
TRAV17-201ENST00000390445 RUSC2Q8N2Y8 1516 aa14.68□□□□□ -0.06
TRAV17-201ENST00000390445 CUL7Q14999 1698 aa14.65□□□□□ -0.06
TRAV17-201ENST00000390445 KIF13AQ9H1H9 1805 aa14.62□□□□□ -0.07
TRAV17-201ENST00000390445 PRG4Q92954 1404 aaPredicted RBP14.59□□□□□ -0.07
TRAV17-201ENST00000390445 KIF27Q86VH2 1401 aa14.58□□□□□ -0.08
TRAV17-201ENST00000390445 RBM42Q9BTD8 480 aaKnown RBP14.57□□□□□ -0.08
TRAV17-201ENST00000390445 IGF1RP08069 1367 aa14.57□□□□□ -0.08
TRAV17-201ENST00000390445 JPH4Q96JJ6 628 aa14.55□□□□□ -0.08
TRAV17-201ENST00000390445 ADCY10Q96PN6 1610 aa14.52□□□□□ -0.09
TRAV17-201ENST00000390445 KIAA0586Q9BVV6 1533 aa14.51□□□□□ -0.09
TRAV17-201ENST00000390445 CARMIL1Q5VZK9 1371 aa14.47□□□□□ -0.09
TRAV17-201ENST00000390445 TSPOAP1O95153 1857 aa14.47□□□□□ -0.09
TRAV17-201ENST00000390445 POTEHQ6S545 545 aa14.46□□□□□ -0.09
TRAV17-201ENST00000390445 AKT1S1Q96B36 256 aa14.46□□□□□ -0.09
TRAV17-201ENST00000390445 IQGAP2Q13576 1575 aa14.45□□□□□ -0.1
TRAV17-201ENST00000390445 CTTNBP2Q8WZ74 1663 aa14.44□□□□□ -0.1
TRAV17-201ENST00000390445 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
TRAV17-201ENST00000390445 DIP2BQ9P265 1576 aa14.42□□□□□ -0.1
TRAV17-201ENST00000390445 MAPKBP1O60336 1514 aa14.41□□□□□ -0.1
TRAV17-201ENST00000390445 TTBK1Q5TCY1 1321 aaPredicted RBP14.39□□□□□ -0.11
TRAV17-201ENST00000390445 RAPGEF2Q9Y4G8 1499 aa14.38□□□□□ -0.11
TRAV17-201ENST00000390445 ABCC10Q5T3U5 1492 aa14.37□□□□□ -0.11
TRAV17-201ENST00000390445 DISP1Q96F81 1524 aa14.36□□□□□ -0.11
TRAV17-201ENST00000390445 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
TRAV17-201ENST00000390445 KIAA0556O60303 1618 aa14.34□□□□□ -0.11
TRAV17-201ENST00000390445 PTPRGP23470 1445 aa14.34□□□□□ -0.11
TRAV17-201ENST00000390445 CARMIL2Q6F5E8 1435 aa14.34□□□□□ -0.11
TRAV17-201ENST00000390445 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRAV17-201ENST00000390445 UGGT2Q9NYU1 1516 aa14.33□□□□□ -0.12
TRAV17-201ENST00000390445 FAM69CQ0P6D2 419 aa14.33□□□□□ -0.12
TRAV17-201ENST00000390445 TNIKQ9UKE5 1360 aa14.33□□□□□ -0.12
TRAV17-201ENST00000390445 VASPP50552 380 aaPredicted RBP14.31□□□□□ -0.12
TRAV17-201ENST00000390445 PPRC1Q5VV67 1664 aaKnown RBP14.3□□□□□ -0.12
TRAV17-201ENST00000390445 ABCC2Q92887 1545 aa14.3□□□□□ -0.12
TRAV17-201ENST00000390445 ZCCHC11Q5TAX3 1644 aaKnown RBP14.3□□□□□ -0.12
TRAV17-201ENST00000390445 KDM6BO15054 1643 aa14.28□□□□□ -0.12
TRAV17-201ENST00000390445 STAG3Q9UJ98 1225 aa14.27□□□□□ -0.13
TRAV17-201ENST00000390445 UHRF1BP1LA0JNW5 1464 aa14.26□□□□□ -0.13
TRAV17-201ENST00000390445 SPDYE1Q8NFV5 336 aaPredicted RBP14.26□□□□□ -0.13
TRAV17-201ENST00000390445 UACAQ9BZF9 1416 aa14.25□□□□□ -0.13
TRAV17-201ENST00000390445 PRXQ9BXM0 1461 aa14.25□□□□□ -0.13
TRAV17-201ENST00000390445 ASXL2Q76L83 1435 aa14.24□□□□□ -0.13
TRAV17-201ENST00000390445 GLI2P10070 1586 aa14.22□□□□□ -0.13
TRAV17-201ENST00000390445 MAP3K4Q9Y6R4 1608 aa14.22□□□□□ -0.13
TRAV17-201ENST00000390445 KDM5BQ9UGL1 1544 aa14.21□□□□□ -0.13
TRAV17-201ENST00000390445 PITPNM1O00562 1244 aa14.21□□□□□ -0.13
TRAV17-201ENST00000390445 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
TRAV17-201ENST00000390445 PLB1Q6P1J6 1458 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms