RNA–Protein interactions for RNA: ENST00000390427.3

TRAV5-201, Transcript of T cell receptor alpha variable 5, humanhuman

APPRIS P1 BASIC

Gene TRAV5, Length 352 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5-201ENST00000390427 TOP2AP11388 1531 aaKnown RBP11.59□□□□□ -0.55
TRAV5-201ENST00000390427 PRDM2Q13029 1718 aa11.56□□□□□ -0.56
TRAV5-201ENST00000390427 ZNF608Q9ULD9 1512 aaPredicted RBP11.55□□□□□ -0.56
TRAV5-201ENST00000390427 RSF1Q96T23 1441 aaPredicted RBP11.54□□□□□ -0.56
TRAV5-201ENST00000390427 CYB5RLQ6IPT4 315 aa11.52□□□□□ -0.57
TRAV5-201ENST00000390427 ABCC8Q09428 1581 aa11.51□□□□□ -0.57
TRAV5-201ENST00000390427 TOPBP1Q92547 1522 aa11.5□□□□□ -0.57
TRAV5-201ENST00000390427 EIF4G3O43432 1585 aaKnown RBP11.5□□□□□ -0.57
TRAV5-201ENST00000390427 MKRN4PQ13434 485 aaPredicted RBP11.48□□□□□ -0.57
TRAV5-201ENST00000390427 RBM42Q9BTD8 480 aaKnown RBP11.47□□□□□ -0.57
TRAV5-201ENST00000390427 ARAP1Q96P48 1450 aa11.46□□□□□ -0.57
TRAV5-201ENST00000390427 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
TRAV5-201ENST00000390427 CHD1O14646 1710 aa11.44□□□□□ -0.58
TRAV5-201ENST00000390427 FBLN2P98095 1184 aa11.43□□□□□ -0.58
TRAV5-201ENST00000390427 CCDC88BA6NC98 1476 aa11.43□□□□□ -0.58
TRAV5-201ENST00000390427 AQRO60306 1485 aaKnown RBP eCLIP11.41□□□□□ -0.58
TRAV5-201ENST00000390427 TARBP1Q13395 1621 aaKnown RBP11.41□□□□□ -0.58
TRAV5-201ENST00000390427 PCGF6Q9BYE7 350 aa11.36□□□□□ -0.59
TRAV5-201ENST00000390427 POLA1P09884 1462 aaPredicted RBP11.36□□□□□ -0.59
TRAV5-201ENST00000390427 WDR97A6NE52 1622 aa11.34□□□□□ -0.59
TRAV5-201ENST00000390427 CLASP1Q7Z460 1538 aa11.33□□□□□ -0.6
TRAV5-201ENST00000390427 SYNJ1O43426 1573 aa11.33□□□□□ -0.6
TRAV5-201ENST00000390427 AKT1S1Q96B36 256 aa11.31□□□□□ -0.6
TRAV5-201ENST00000390427 SOGA1O94964 1423 aa11.31□□□□□ -0.6
TRAV5-201ENST00000390427 SNAPC4Q5SXM2 1469 aa11.31□□□□□ -0.6
TRAV5-201ENST00000390427 CHMP7Q8WUX9 453 aaPredicted RBP11.3□□□□□ -0.6
TRAV5-201ENST00000390427 MAGI1Q96QZ7 1491 aaPredicted RBP11.3□□□□□ -0.6
TRAV5-201ENST00000390427 RAD54L2Q9Y4B4 1467 aa11.3□□□□□ -0.6
TRAV5-201ENST00000390427 TDRD9Q8NDG6 1382 aaKnown RBP11.29□□□□□ -0.6
TRAV5-201ENST00000390427 SPDYE2BA6NHP3 402 aa11.29□□□□□ -0.6
TRAV5-201ENST00000390427 SPDYE6P0CI01 402 aa11.29□□□□□ -0.6
TRAV5-201ENST00000390427 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
TRAV5-201ENST00000390427 TRIM26Q12899 539 aaPredicted RBP11.28□□□□□ -0.6
TRAV5-201ENST00000390427 SYNJ2O15056 1496 aa11.25□□□□□ -0.61
TRAV5-201ENST00000390427 GRIN2BQ13224 1484 aa11.25□□□□□ -0.61
TRAV5-201ENST00000390427 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
TRAV5-201ENST00000390427 ZEB1P37275 1124 aaPredicted RBP11.24□□□□□ -0.61
TRAV5-201ENST00000390427 GAPVD1Q14C86 1478 aa11.24□□□□□ -0.61
TRAV5-201ENST00000390427 SSUH2Q9Y2M2 353 aa11.22□□□□□ -0.61
TRAV5-201ENST00000390427 REM2Q8IYK8 340 aaPredicted RBP11.19□□□□□ -0.62
TRAV5-201ENST00000390427 CUX1P39880 1505 aa11.19□□□□□ -0.62
TRAV5-201ENST00000390427 LOC105371045A0A1W2PR82 267 aa11.18□□□□□ -0.62
TRAV5-201ENST00000390427 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
TRAV5-201ENST00000390427 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
TRAV5-201ENST00000390427 PPARGC1BQ86YN6 1023 aaKnown RBP11.15□□□□□ -0.62
TRAV5-201ENST00000390427 ABCA10Q8WWZ4 1543 aa11.12□□□□□ -0.63
TRAV5-201ENST00000390427 ABCA5Q8WWZ7 1642 aa11.12□□□□□ -0.63
TRAV5-201ENST00000390427 GRIN2AQ12879 1464 aa11.11□□□□□ -0.63
TRAV5-201ENST00000390427 CEP170Q5SW79 1584 aa11.09□□□□□ -0.63
TRAV5-201ENST00000390427 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
TRAV5-201ENST00000390427 NUP160Q12769 1436 aa11.09□□□□□ -0.63
TRAV5-201ENST00000390427 ERCC6L2Q5T890 1561 aa11.08□□□□□ -0.64
TRAV5-201ENST00000390427 ADAMTS12P58397 1594 aa11.07□□□□□ -0.64
TRAV5-201ENST00000390427 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
TRAV5-201ENST00000390427 PITPNM1O00562 1244 aa11.05□□□□□ -0.64
TRAV5-201ENST00000390427 SPDYE4A6NLX3 237 aa11.04□□□□□ -0.64
TRAV5-201ENST00000390427 KIF13AQ9H1H9 1805 aa11.04□□□□□ -0.64
TRAV5-201ENST00000390427 FHAD1B1AJZ9 1412 aa11.03□□□□□ -0.64
TRAV5-201ENST00000390427 WRNQ14191 1432 aaPredicted RBP eCLIP11.03□□□□□ -0.64
TRAV5-201ENST00000390427 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
TRAV5-201ENST00000390427 POTEHQ6S545 545 aa11.01□□□□□ -0.65
TRAV5-201ENST00000390427 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
TRAV5-201ENST00000390427 PRG4Q92954 1404 aaPredicted RBP10.99□□□□□ -0.65
TRAV5-201ENST00000390427 ABCC10Q5T3U5 1492 aa10.99□□□□□ -0.65
TRAV5-201ENST00000390427 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
TRAV5-201ENST00000390427 NPM1P06748 294 aaKnown RBP eCLIP10.97□□□□□ -0.65
TRAV5-201ENST00000390427 FAM69CQ0P6D2 419 aa10.97□□□□□ -0.65
TRAV5-201ENST00000390427 MAPKBP1O60336 1514 aa10.97□□□□□ -0.65
TRAV5-201ENST00000390427 JPH4Q96JJ6 628 aa10.95□□□□□ -0.66
TRAV5-201ENST00000390427 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
TRAV5-201ENST00000390427 BIVM-ERCC5R4GMW8 1640 aa10.95□□□□□ -0.66
TRAV5-201ENST00000390427 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAV5-201ENST00000390427 PROM2Q8N271 834 aa10.94□□□□□ -0.66
TRAV5-201ENST00000390427 DIP2BQ9P265 1576 aa10.94□□□□□ -0.66
TRAV5-201ENST00000390427 KDM6BO15054 1643 aa10.92□□□□□ -0.66
TRAV5-201ENST00000390427 RUSC2Q8N2Y8 1516 aa10.91□□□□□ -0.66
TRAV5-201ENST00000390427 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
TRAV5-201ENST00000390427 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
TRAV5-201ENST00000390427 CLEC11AQ9Y240 323 aa10.9□□□□□ -0.66
TRAV5-201ENST00000390427 ADCY10Q96PN6 1610 aa10.89□□□□□ -0.67
TRAV5-201ENST00000390427 ILDR1Q86SU0 546 aaPredicted RBP10.88□□□□□ -0.67
TRAV5-201ENST00000390427 KIAA0586Q9BVV6 1533 aa10.84□□□□□ -0.67
TRAV5-201ENST00000390427 TSPOAP1O95153 1857 aa10.83□□□□□ -0.68
TRAV5-201ENST00000390427 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
TRAV5-201ENST00000390427 FKBP8Q14318 412 aa10.81□□□□□ -0.68
TRAV5-201ENST00000390427 STAG3Q9UJ98 1225 aa10.81□□□□□ -0.68
TRAV5-201ENST00000390427 FAM9AQ8IZU1 332 aaPredicted RBP10.79□□□□□ -0.68
TRAV5-201ENST00000390427 PTPRGP23470 1445 aa10.78□□□□□ -0.68
TRAV5-201ENST00000390427 ADGRL1O94910 1474 aa10.78□□□□□ -0.68
TRAV5-201ENST00000390427 PLB1Q6P1J6 1458 aa10.78□□□□□ -0.68
TRAV5-201ENST00000390427 ABCC2Q92887 1545 aa10.78□□□□□ -0.68
TRAV5-201ENST00000390427 GLI2P10070 1586 aa10.77□□□□□ -0.68
TRAV5-201ENST00000390427 CUL7Q14999 1698 aa10.77□□□□□ -0.69
TRAV5-201ENST00000390427 CARMIL2Q6F5E8 1435 aa10.76□□□□□ -0.69
TRAV5-201ENST00000390427 EEA1Q15075 1411 aa10.75□□□□□ -0.69
TRAV5-201ENST00000390427 ASXL2Q76L83 1435 aa10.75□□□□□ -0.69
TRAV5-201ENST00000390427 PRKAR2AP13861 404 aaKnown RBP10.75□□□□□ -0.69
TRAV5-201ENST00000390427 IGF1RP08069 1367 aa10.75□□□□□ -0.69
TRAV5-201ENST00000390427 TNIKQ9UKE5 1360 aa10.75□□□□□ -0.69
TRAV5-201ENST00000390427 KIF27Q86VH2 1401 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms