RNA–Protein interactions for RNA: ENST00000389594.7

CCDC196-202, Transcript of coiled-coil domain containing 196, humanhuman

TSL 5

Gene CCDC196, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-202ENST00000389594 DSG3P32926 999 aa14.76□□□□□ -0.05
CCDC196-202ENST00000389594 ZNF219Q9P2Y4 722 aaPredicted RBP14.76□□□□□ -0.05
CCDC196-202ENST00000389594 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
CCDC196-202ENST00000389594 ABCC8Q09428 1581 aa14.76□□□□□ -0.05
CCDC196-202ENST00000389594 CHD1O14646 1710 aa14.73□□□□□ -0.05
CCDC196-202ENST00000389594 ATXN8OSP0DMR3 200 aa14.73□□□□□ -0.05
CCDC196-202ENST00000389594 ABCB7O75027 752 aa14.71□□□□□ -0.05
CCDC196-202ENST00000389594 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
CCDC196-202ENST00000389594 AQRO60306 1485 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCDC196-202ENST00000389594 WDR97A6NE52 1622 aa14.62□□□□□ -0.07
CCDC196-202ENST00000389594 ARAP1Q96P48 1450 aa14.61□□□□□ -0.07
CCDC196-202ENST00000389594 POLA2Q14181 598 aa14.58□□□□□ -0.08
CCDC196-202ENST00000389594 CLASP1Q7Z460 1538 aa14.57□□□□□ -0.08
CCDC196-202ENST00000389594 RAD54L2Q9Y4B4 1467 aa14.56□□□□□ -0.08
CCDC196-202ENST00000389594 CUX1P39880 1505 aa14.52□□□□□ -0.08
CCDC196-202ENST00000389594 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.08
CCDC196-202ENST00000389594 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.08
CCDC196-202ENST00000389594 SOGA1O94964 1423 aa14.51□□□□□ -0.09
CCDC196-202ENST00000389594 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
CCDC196-202ENST00000389594 MAGI1Q96QZ7 1491 aaPredicted RBP14.5□□□□□ -0.09
CCDC196-202ENST00000389594 TDRD9Q8NDG6 1382 aaKnown RBP14.48□□□□□ -0.09
CCDC196-202ENST00000389594 SYNJ1O43426 1573 aa14.48□□□□□ -0.09
CCDC196-202ENST00000389594 PBRM1Q86U86 1689 aa14.48□□□□□ -0.09
CCDC196-202ENST00000389594 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
CCDC196-202ENST00000389594 ABCA5Q8WWZ7 1642 aa14.44□□□□□ -0.1
CCDC196-202ENST00000389594 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
CCDC196-202ENST00000389594 FBLN2P98095 1184 aa14.42□□□□□ -0.1
CCDC196-202ENST00000389594 ABCA10Q8WWZ4 1543 aa14.38□□□□□ -0.11
CCDC196-202ENST00000389594 GAPVD1Q14C86 1478 aa14.37□□□□□ -0.11
CCDC196-202ENST00000389594 CHMP7Q8WUX9 453 aaPredicted RBP14.33□□□□□ -0.12
CCDC196-202ENST00000389594 ADAMTS12P58397 1594 aa14.31□□□□□ -0.12
CCDC196-202ENST00000389594 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
CCDC196-202ENST00000389594 ERCC6L2Q5T890 1561 aa14.3□□□□□ -0.12
CCDC196-202ENST00000389594 SHROOM2Q13796 1616 aa14.3□□□□□ -0.12
CCDC196-202ENST00000389594 GRIN2AQ12879 1464 aa14.29□□□□□ -0.12
CCDC196-202ENST00000389594 CEP170Q5SW79 1584 aa14.29□□□□□ -0.12
CCDC196-202ENST00000389594 NUP160Q12769 1436 aa14.27□□□□□ -0.12
CCDC196-202ENST00000389594 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
CCDC196-202ENST00000389594 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
CCDC196-202ENST00000389594 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
CCDC196-202ENST00000389594 ERICH3Q5RHP9 1530 aa14.2□□□□□ -0.14
CCDC196-202ENST00000389594 ZBTB12Q9Y330 459 aaPredicted RBP14.19□□□□□ -0.14
CCDC196-202ENST00000389594 FHAD1B1AJZ9 1412 aa14.18□□□□□ -0.14
CCDC196-202ENST00000389594 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
CCDC196-202ENST00000389594 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
CCDC196-202ENST00000389594 PRG4Q92954 1404 aaPredicted RBP14.06□□□□□ -0.16
CCDC196-202ENST00000389594 MAPKBP1O60336 1514 aa14.05□□□□□ -0.16
CCDC196-202ENST00000389594 SUPT5HO00267 1087 aaKnown RBP14.04□□□□□ -0.16
CCDC196-202ENST00000389594 ADCY10Q96PN6 1610 aa14.03□□□□□ -0.16
CCDC196-202ENST00000389594 DIP2BQ9P265 1576 aa14.02□□□□□ -0.16
CCDC196-202ENST00000389594 ABCC10Q5T3U5 1492 aa14□□□□□ -0.17
CCDC196-202ENST00000389594 CUL7Q14999 1698 aa13.99□□□□□ -0.17
CCDC196-202ENST00000389594 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
CCDC196-202ENST00000389594 KIAA0586Q9BVV6 1533 aa13.95□□□□□ -0.18
CCDC196-202ENST00000389594 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
CCDC196-202ENST00000389594 IGF1RP08069 1367 aa13.9□□□□□ -0.18
CCDC196-202ENST00000389594 KDM6BO15054 1643 aa13.9□□□□□ -0.19
CCDC196-202ENST00000389594 KIF27Q86VH2 1401 aa13.88□□□□□ -0.19
CCDC196-202ENST00000389594 PPRC1Q5VV67 1664 aaKnown RBP13.86□□□□□ -0.19
CCDC196-202ENST00000389594 SPDYE2BA6NHP3 402 aa13.86□□□□□ -0.19
CCDC196-202ENST00000389594 SPDYE6P0CI01 402 aa13.86□□□□□ -0.19
CCDC196-202ENST00000389594 FAM69CQ0P6D2 419 aa13.86□□□□□ -0.19
CCDC196-202ENST00000389594 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
CCDC196-202ENST00000389594 TSPOAP1O95153 1857 aa13.85□□□□□ -0.19
CCDC196-202ENST00000389594 GLI2P10070 1586 aa13.83□□□□□ -0.2
CCDC196-202ENST00000389594 IQGAP2Q13576 1575 aa13.83□□□□□ -0.2
CCDC196-202ENST00000389594 ABCC2Q92887 1545 aa13.82□□□□□ -0.2
CCDC196-202ENST00000389594 NPM1P06748 294 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC196-202ENST00000389594 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
CCDC196-202ENST00000389594 UHRF1BP1LA0JNW5 1464 aa13.8□□□□□ -0.2
CCDC196-202ENST00000389594 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
CCDC196-202ENST00000389594 PTPRGP23470 1445 aa13.79□□□□□ -0.2
CCDC196-202ENST00000389594 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
CCDC196-202ENST00000389594 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
CCDC196-202ENST00000389594 TNIKQ9UKE5 1360 aa13.78□□□□□ -0.2
CCDC196-202ENST00000389594 DISP1Q96F81 1524 aa13.78□□□□□ -0.2
CCDC196-202ENST00000389594 KDM4FA0A1W2PPD8 638 aa13.77□□□□□ -0.21
CCDC196-202ENST00000389594 MAP3K4Q9Y6R4 1608 aa13.77□□□□□ -0.21
CCDC196-202ENST00000389594 CARMIL2Q6F5E8 1435 aa13.76□□□□□ -0.21
CCDC196-202ENST00000389594 SPDYE4A6NLX3 237 aa13.76□□□□□ -0.21
CCDC196-202ENST00000389594 PLB1Q6P1J6 1458 aa13.75□□□□□ -0.21
CCDC196-202ENST00000389594 ASXL2Q76L83 1435 aa13.75□□□□□ -0.21
CCDC196-202ENST00000389594 UGGT2Q9NYU1 1516 aa13.74□□□□□ -0.21
CCDC196-202ENST00000389594 KDM5BQ9UGL1 1544 aa13.74□□□□□ -0.21
CCDC196-202ENST00000389594 KIAA0556O60303 1618 aa13.72□□□□□ -0.21
CCDC196-202ENST00000389594 ZCCHC11Q5TAX3 1644 aaKnown RBP13.72□□□□□ -0.21
CCDC196-202ENST00000389594 UACAQ9BZF9 1416 aa13.72□□□□□ -0.21
CCDC196-202ENST00000389594 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
CCDC196-202ENST00000389594 EPRSP07814 1512 aaKnown RBP13.7□□□□□ -0.22
CCDC196-202ENST00000389594 COL17A1Q9UMD9 1497 aaPredicted RBP13.69□□□□□ -0.22
CCDC196-202ENST00000389594 CTTNBP2Q8WZ74 1663 aa13.69□□□□□ -0.22
CCDC196-202ENST00000389594 RAPGEF2Q9Y4G8 1499 aa13.68□□□□□ -0.22
CCDC196-202ENST00000389594 FKBP8Q14318 412 aa13.66□□□□□ -0.22
CCDC196-202ENST00000389594 ADGRL1O94910 1474 aa13.66□□□□□ -0.22
CCDC196-202ENST00000389594 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
CCDC196-202ENST00000389594 CFAP43Q8NDM7 1665 aa13.62□□□□□ -0.23
CCDC196-202ENST00000389594 ABCA8O94911 1581 aa13.62□□□□□ -0.23
CCDC196-202ENST00000389594 WDR7Q9Y4E6 1490 aa13.61□□□□□ -0.23
CCDC196-202ENST00000389594 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
CCDC196-202ENST00000389594 PITPNM1O00562 1244 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms