RNA–Protein interactions for RNA: ENST00000389594.7

CCDC196-202, Transcript of coiled-coil domain containing 196, humanhuman

TSL 5

Gene CCDC196, Length 1,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-202ENST00000389594 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
CCDC196-202ENST00000389594 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
CCDC196-202ENST00000389594 PHF23Q9BUL5 403 aaPredicted RBP21.31■■□□□ 1
CCDC196-202ENST00000389594 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
CCDC196-202ENST00000389594 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
CCDC196-202ENST00000389594 FOXD1Q16676 465 aa19.68■□□□□ 0.74
CCDC196-202ENST00000389594 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
CCDC196-202ENST00000389594 PPP6R1Q9UPN7 881 aa18.87■□□□□ 0.61
CCDC196-202ENST00000389594 ADRA2BP18089 450 aa18.82■□□□□ 0.6
CCDC196-202ENST00000389594 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
CCDC196-202ENST00000389594 CCDC180Q9P1Z9 1646 aa18.16■□□□□ 0.5
CCDC196-202ENST00000389594 ABCC9O60706 1549 aa18.13■□□□□ 0.49
CCDC196-202ENST00000389594 MSH5O43196 834 aa18.07■□□□□ 0.48
CCDC196-202ENST00000389594 RB1CC1Q8TDY2 1594 aa17.27■□□□□ 0.35
CCDC196-202ENST00000389594 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
CCDC196-202ENST00000389594 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
CCDC196-202ENST00000389594 DNAJC5BQ9UF47 199 aa17.15■□□□□ 0.34
CCDC196-202ENST00000389594 NACADO15069 1562 aa17.13■□□□□ 0.33
CCDC196-202ENST00000389594 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
CCDC196-202ENST00000389594 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
CCDC196-202ENST00000389594 MYO15BQ96JP2 1530 aa16.9■□□□□ 0.3
CCDC196-202ENST00000389594 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
CCDC196-202ENST00000389594 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
CCDC196-202ENST00000389594 DMRT2Q9Y5R5 561 aa16.83■□□□□ 0.28
CCDC196-202ENST00000389594 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCDC196-202ENST00000389594 CNKSR2Q8WXI2 1034 aa16.7■□□□□ 0.26
CCDC196-202ENST00000389594 DCAF8L2P0C7V8 631 aa16.69■□□□□ 0.26
CCDC196-202ENST00000389594 KCNA4P22459 653 aa16.69■□□□□ 0.26
CCDC196-202ENST00000389594 ZCCHC6Q5VYS8 1495 aaKnown RBP16.62■□□□□ 0.25
CCDC196-202ENST00000389594 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
CCDC196-202ENST00000389594 SHROOM4Q9ULL8 1493 aa16.6■□□□□ 0.25
CCDC196-202ENST00000389594 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
CCDC196-202ENST00000389594 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
CCDC196-202ENST00000389594 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
CCDC196-202ENST00000389594 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
CCDC196-202ENST00000389594 RNF216Q9NWF9 866 aaPredicted RBP16.42■□□□□ 0.22
CCDC196-202ENST00000389594 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
CCDC196-202ENST00000389594 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
CCDC196-202ENST00000389594 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
CCDC196-202ENST00000389594 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
CCDC196-202ENST00000389594 DNAJC5Q9H3Z4 198 aa15.84■□□□□ 0.13
CCDC196-202ENST00000389594 NCAPD3P42695 1498 aa15.8■□□□□ 0.12
CCDC196-202ENST00000389594 SLC4A1APQ9BWU0 796 aaKnown RBP15.79■□□□□ 0.12
CCDC196-202ENST00000389594 CUX2O14529 1486 aa15.76■□□□□ 0.11
CCDC196-202ENST00000389594 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.11
CCDC196-202ENST00000389594 HMGXB3Q12766 1538 aa15.71■□□□□ 0.11
CCDC196-202ENST00000389594 SMARCA4P51532 1647 aa15.7■□□□□ 0.1
CCDC196-202ENST00000389594 SMARCA2P51531 1590 aa15.66■□□□□ 0.1
CCDC196-202ENST00000389594 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
CCDC196-202ENST00000389594 ERCC6Q03468 1493 aa15.63■□□□□ 0.09
CCDC196-202ENST00000389594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCDC196-202ENST00000389594 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
CCDC196-202ENST00000389594 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.08
CCDC196-202ENST00000389594 NESP48681 1621 aa15.57■□□□□ 0.08
CCDC196-202ENST00000389594 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
CCDC196-202ENST00000389594 THOC2Q8NI27 1593 aaKnown RBP15.54■□□□□ 0.08
CCDC196-202ENST00000389594 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.07
CCDC196-202ENST00000389594 LAMC3Q9Y6N6 1575 aa15.49■□□□□ 0.07
CCDC196-202ENST00000389594 MROH2BQ7Z745 1585 aa15.44■□□□□ 0.06
CCDC196-202ENST00000389594 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
CCDC196-202ENST00000389594 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
CCDC196-202ENST00000389594 ZBTB22O15209 634 aa15.41■□□□□ 0.06
CCDC196-202ENST00000389594 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
CCDC196-202ENST00000389594 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
CCDC196-202ENST00000389594 C1QBPQ07021 282 aaKnown RBP15.28■□□□□ 0.04
CCDC196-202ENST00000389594 WDR62O43379 1518 aa15.27■□□□□ 0.03
CCDC196-202ENST00000389594 WIZO95785 1651 aa15.26■□□□□ 0.03
CCDC196-202ENST00000389594 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
CCDC196-202ENST00000389594 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
CCDC196-202ENST00000389594 MRC2Q9UBG0 1479 aa15.23■□□□□ 0.03
CCDC196-202ENST00000389594 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
CCDC196-202ENST00000389594 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
CCDC196-202ENST00000389594 CSRNP3Q8WYN3 585 aa15.14■□□□□ 0.01
CCDC196-202ENST00000389594 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
CCDC196-202ENST00000389594 CFTRP13569 1480 aa15.1■□□□□ 0.01
CCDC196-202ENST00000389594 FANCD2Q9BXW9 1451 aa15.09■□□□□ 0.01
CCDC196-202ENST00000389594 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
CCDC196-202ENST00000389594 TOP2AP11388 1531 aaKnown RBP15.07■□□□□ 0
CCDC196-202ENST00000389594 PRDM2Q13029 1718 aa15.05■□□□□ -0
CCDC196-202ENST00000389594 URB2Q14146 1524 aaKnown RBP15.02■□□□□ -0
CCDC196-202ENST00000389594 RSF1Q96T23 1441 aaPredicted RBP15.02■□□□□ -0
CCDC196-202ENST00000389594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
CCDC196-202ENST00000389594 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
CCDC196-202ENST00000389594 SAMD1Q6SPF0 538 aaPredicted RBP14.99□□□□□ -0.01
CCDC196-202ENST00000389594 TRIM41Q8WV44 630 aa14.96□□□□□ -0.01
CCDC196-202ENST00000389594 CAPN15O75808 1086 aa14.94□□□□□ -0.02
CCDC196-202ENST00000389594 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
CCDC196-202ENST00000389594 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
CCDC196-202ENST00000389594 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
CCDC196-202ENST00000389594 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
CCDC196-202ENST00000389594 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
CCDC196-202ENST00000389594 TRHP20396 242 aaPredicted RBP14.85□□□□□ -0.03
CCDC196-202ENST00000389594 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
CCDC196-202ENST00000389594 APLP2Q06481 763 aa14.84□□□□□ -0.03
CCDC196-202ENST00000389594 IFT140Q96RY7 1462 aa14.83□□□□□ -0.03
CCDC196-202ENST00000389594 ZNF608Q9ULD9 1512 aaPredicted RBP14.83□□□□□ -0.04
CCDC196-202ENST00000389594 TOPBP1Q92547 1522 aa14.82□□□□□ -0.04
CCDC196-202ENST00000389594 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
CCDC196-202ENST00000389594 DNMBPQ6XZF7 1577 aa14.77□□□□□ -0.04
CCDC196-202ENST00000389594 ARHGEF11O15085 1522 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms