RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 SETD5Q9C0A6 1442 aa23.22■■□□□ 1.31
TNIP1-202ENST00000389378 PHLDB1Q86UU1 1377 aa23.21■■□□□ 1.31
TNIP1-202ENST00000389378 WDR97A6NE52 1622 aa23.21■■□□□ 1.31
TNIP1-202ENST00000389378 IGF1RP08069 1367 aa23.18■■□□□ 1.3
TNIP1-202ENST00000389378 ANP32EQ9BTT0 268 aa23.16■■□□□ 1.3
TNIP1-202ENST00000389378 PPP1R15AO75807 674 aaPredicted RBP23.12■■□□□ 1.29
TNIP1-202ENST00000389378 CARMIL1Q5VZK9 1371 aa23.12■■□□□ 1.29
TNIP1-202ENST00000389378 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
TNIP1-202ENST00000389378 NEFLP07196 543 aa23.1■■□□□ 1.29
TNIP1-202ENST00000389378 NCAPD3P42695 1498 aa23.1■■□□□ 1.29
TNIP1-202ENST00000389378 LRRC9Q6ZRR7 1453 aa23.1■■□□□ 1.29
TNIP1-202ENST00000389378 CFTRP13569 1480 aa23.09■■□□□ 1.29
TNIP1-202ENST00000389378 ANP32CO43423 234 aa23.08■■□□□ 1.28
TNIP1-202ENST00000389378 HMGXB3Q12766 1538 aa23■■□□□ 1.27
TNIP1-202ENST00000389378 RBM19Q9Y4C8 960 aaKnown RBP22.99■■□□□ 1.27
TNIP1-202ENST00000389378 FHOD3Q2V2M9 1422 aa22.99■■□□□ 1.27
TNIP1-202ENST00000389378 IRX6P78412 446 aaPredicted RBP22.96■■□□□ 1.27
TNIP1-202ENST00000389378 FGD5Q6ZNL6 1462 aa22.95■■□□□ 1.26
TNIP1-202ENST00000389378 TONSLQ96HA7 1378 aa22.93■■□□□ 1.26
TNIP1-202ENST00000389378 FHAD1B1AJZ9 1412 aa22.92■■□□□ 1.26
TNIP1-202ENST00000389378 PCF11O94913 1555 aaKnown RBP22.92■■□□□ 1.26
TNIP1-202ENST00000389378 CCER2I3L3R5 266 aa22.92■■□□□ 1.26
TNIP1-202ENST00000389378 MAP3K1Q13233 1512 aa22.91■■□□□ 1.26
TNIP1-202ENST00000389378 TIMELESSQ9UNS1 1208 aa22.88■■□□□ 1.25
TNIP1-202ENST00000389378 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
TNIP1-202ENST00000389378 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
TNIP1-202ENST00000389378 RAD54L2Q9Y4B4 1467 aa22.81■■□□□ 1.24
TNIP1-202ENST00000389378 CHIC2Q9UKJ5 165 aa22.78■■□□□ 1.24
TNIP1-202ENST00000389378 PTPRKQ15262 1439 aa22.78■■□□□ 1.24
TNIP1-202ENST00000389378 MTUS2Q5JR59 1369 aa22.78■■□□□ 1.24
TNIP1-202ENST00000389378 CCDC18Q5T9S5 1454 aa22.77■■□□□ 1.23
TNIP1-202ENST00000389378 CFAP43Q8NDM7 1665 aa22.76■■□□□ 1.23
TNIP1-202ENST00000389378 RRP7BPQ9NSQ0 103 aa22.75■■□□□ 1.23
TNIP1-202ENST00000389378 FGD6Q6ZV73 1430 aa22.75■■□□□ 1.23
TNIP1-202ENST00000389378 BCL11AQ9H165 835 aa22.75■■□□□ 1.23
TNIP1-202ENST00000389378 MSH5O43196 834 aa22.74■■□□□ 1.23
TNIP1-202ENST00000389378 CASKIN1Q8WXD9 1431 aa22.71■■□□□ 1.23
TNIP1-202ENST00000389378 FYCO1Q9BQS8 1478 aa22.7■■□□□ 1.22
TNIP1-202ENST00000389378 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.221e-6■■■■□ 26.5
TNIP1-202ENST00000389378 HSPA5P11021 654 aaKnown RBP22.69■■□□□ 1.22
TNIP1-202ENST00000389378 CCDC184Q52MB2 194 aa22.69■■□□□ 1.22
TNIP1-202ENST00000389378 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
TNIP1-202ENST00000389378 WASHC2AQ641Q2 1341 aa22.66■■□□□ 1.22
TNIP1-202ENST00000389378 UACAQ9BZF9 1416 aa22.66■■□□□ 1.22
TNIP1-202ENST00000389378 CNGB1Q14028 1251 aaPredicted RBP22.66■■□□□ 1.22
TNIP1-202ENST00000389378 FANCD2Q9BXW9 1451 aa22.66■■□□□ 1.22
TNIP1-202ENST00000389378 FOXD1Q16676 465 aa22.65■■□□□ 1.22
TNIP1-202ENST00000389378 CDK11AQ9UQ88 783 aaPredicted RBP22.64■■□□□ 1.21
TNIP1-202ENST00000389378 FAM9BQ8IZU0 186 aa22.63■■□□□ 1.21
TNIP1-202ENST00000389378 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
TNIP1-202ENST00000389378 HFM1A2PYH4 1435 aa22.63■■□□□ 1.21
TNIP1-202ENST00000389378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.62■■□□□ 1.21
TNIP1-202ENST00000389378 NAIPQ13075 1403 aa22.62■■□□□ 1.21
TNIP1-202ENST00000389378 FMN1Q68DA7 1419 aa22.59■■□□□ 1.21
TNIP1-202ENST00000389378 PTPN23Q9H3S7 1636 aa22.59■■□□□ 1.21
TNIP1-202ENST00000389378 POLA1P09884 1462 aaPredicted RBP22.58■■□□□ 1.21
TNIP1-202ENST00000389378 TDRD9Q8NDG6 1382 aaKnown RBP22.57■■□□□ 1.2
TNIP1-202ENST00000389378 NCOA2Q15596 1464 aa22.57■■□□□ 1.2
TNIP1-202ENST00000389378 C11orf95C9JLR9 678 aaPredicted RBP22.56■■□□□ 1.2
TNIP1-202ENST00000389378 ERICH6Q7L0X2 663 aa22.56■■□□□ 1.2
TNIP1-202ENST00000389378 EIF4G2P78344 907 aaKnown RBP eCLIP22.55■■□□□ 1.2
TNIP1-202ENST00000389378 EFCAB5A4FU69 1503 aa22.55■■□□□ 1.2
TNIP1-202ENST00000389378 NESP48681 1621 aa22.55■■□□□ 1.2
TNIP1-202ENST00000389378 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
TNIP1-202ENST00000389378 SENP3-EIF4A1A0A087X0R7 540 aa22.54■■□□□ 1.2
TNIP1-202ENST00000389378 B4GALNT3Q6L9W6 998 aa22.53■■□□□ 1.2
TNIP1-202ENST00000389378 MYOM3Q5VTT5 1437 aa22.53■■□□□ 1.2
TNIP1-202ENST00000389378 ABCA10Q8WWZ4 1543 aa22.52■■□□□ 1.2
TNIP1-202ENST00000389378 L3MBTL2Q969R5 705 aa22.52■■□□□ 1.2
TNIP1-202ENST00000389378 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
TNIP1-202ENST00000389378 MRS2Q9HD23 443 aa22.51■■□□□ 1.19
TNIP1-202ENST00000389378 KDM5BQ9UGL1 1544 aa22.5■■□□□ 1.19
TNIP1-202ENST00000389378 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
TNIP1-202ENST00000389378 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
TNIP1-202ENST00000389378 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
TNIP1-202ENST00000389378 PRKRIP1Q9H875 184 aaPredicted RBP22.44■■□□□ 1.18
TNIP1-202ENST00000389378 PPP4R2Q9NY27 417 aa22.44■■□□□ 1.18
TNIP1-202ENST00000389378 CTTNBP2Q8WZ74 1663 aa22.44■■□□□ 1.18
TNIP1-202ENST00000389378 FANCIQ9NVI1 1328 aa22.43■■□□□ 1.18
TNIP1-202ENST00000389378 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
TNIP1-202ENST00000389378 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
TNIP1-202ENST00000389378 NBPF8Q3BBV2 869 aa22.4■■□□□ 1.18
TNIP1-202ENST00000389378 CC2D2AQ9P2K1 1620 aa22.39■■□□□ 1.18
TNIP1-202ENST00000389378 CNTLNQ9NXG0 1405 aa22.39■■□□□ 1.17
TNIP1-202ENST00000389378 KDM6BO15054 1643 aa22.38■■□□□ 1.17
TNIP1-202ENST00000389378 GRIN2BQ13224 1484 aa22.38■■□□□ 1.17
TNIP1-202ENST00000389378 CUL7Q14999 1698 aa22.37■■□□□ 1.17
TNIP1-202ENST00000389378 MAGI3Q5TCQ9 1506 aa22.37■■□□□ 1.17
TNIP1-202ENST00000389378 CCDC7Q96M83 1385 aa22.36■■□□□ 1.17
TNIP1-202ENST00000389378 SUPT6HQ7KZ85 1726 aaKnown RBP22.36■■□□□ 1.17
TNIP1-202ENST00000389378 ZNF326Q5BKZ1 582 aaKnown RBP22.34■■□□□ 1.17
TNIP1-202ENST00000389378 EHBP1L1Q8N3D4 1523 aa22.31■■□□□ 1.16
TNIP1-202ENST00000389378 KIF7Q2M1P5 1343 aa22.31■■□□□ 1.16
TNIP1-202ENST00000389378 GAPVD1Q14C86 1478 aa22.31■■□□□ 1.16
TNIP1-202ENST00000389378 UGGT2Q9NYU1 1516 aa22.3■■□□□ 1.16
TNIP1-202ENST00000389378 ZNF644Q9H582 1327 aaPredicted RBP22.29■■□□□ 1.16
TNIP1-202ENST00000389378 URB2Q14146 1524 aaKnown RBP22.29■■□□□ 1.16
TNIP1-202ENST00000389378 SLC4A1APQ9BWU0 796 aaKnown RBP22.29■■□□□ 1.16
TNIP1-202ENST00000389378 ZBED9Q6R2W3 1325 aa22.29■■□□□ 1.16
TNIP1-202ENST00000389378 SAMD9Q5K651 1589 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms