RNA–Protein interactions for RNA: ENST00000388789.4

TTC41P-201, Transcript of tetratricopeptide repeat domain 41, pseudogene, humanhuman

TSL 1 (best)

Gene TTC41P, Length 1,372 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41P-201ENST00000388789 GOLGA3Q08378 1498 aa13.14□□□□□ -0.31
TTC41P-201ENST00000388789 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
TTC41P-201ENST00000388789 KIF21BO75037 1637 aa13.12□□□□□ -0.31
TTC41P-201ENST00000388789 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
TTC41P-201ENST00000388789 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
TTC41P-201ENST00000388789 CUX1P39880 1505 aa13.1□□□□□ -0.31
TTC41P-201ENST00000388789 CEP162Q5TB80 1403 aa13.08□□□□□ -0.31
TTC41P-201ENST00000388789 THOC2Q8NI27 1593 aaKnown RBP13.08□□□□□ -0.31
TTC41P-201ENST00000388789 UBTFP17480 764 aaKnown RBP13.07□□□□□ -0.32
TTC41P-201ENST00000388789 HRCP23327 699 aa13.07□□□□□ -0.32
TTC41P-201ENST00000388789 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
TTC41P-201ENST00000388789 POLA2Q14181 598 aa13.03□□□□□ -0.32
TTC41P-201ENST00000388789 KIF27Q86VH2 1401 aa13.01□□□□□ -0.33
TTC41P-201ENST00000388789 MRC2Q9UBG0 1479 aa13□□□□□ -0.33
TTC41P-201ENST00000388789 FANCD2Q9BXW9 1451 aa12.99□□□□□ -0.33
TTC41P-201ENST00000388789 DNAJC5Q9H3Z4 198 aa12.99□□□□□ -0.33
TTC41P-201ENST00000388789 ERICH3Q5RHP9 1530 aa12.99□□□□□ -0.33
TTC41P-201ENST00000388789 PRXQ9BXM0 1461 aa12.98□□□□□ -0.33
TTC41P-201ENST00000388789 RAPGEF2Q9Y4G8 1499 aa12.97□□□□□ -0.33
TTC41P-201ENST00000388789 WDR62O43379 1518 aa12.95□□□□□ -0.34
TTC41P-201ENST00000388789 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
TTC41P-201ENST00000388789 CLIP1P30622 1438 aa12.93□□□□□ -0.34
TTC41P-201ENST00000388789 FGD5Q6ZNL6 1462 aa12.92□□□□□ -0.34
TTC41P-201ENST00000388789 DNMBPQ6XZF7 1577 aa12.92□□□□□ -0.34
TTC41P-201ENST00000388789 HAX1O00165 279 aa12.89□□□□□ -0.35
TTC41P-201ENST00000388789 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
TTC41P-201ENST00000388789 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
TTC41P-201ENST00000388789 TOPBP1Q92547 1522 aa12.87□□□□□ -0.35
TTC41P-201ENST00000388789 IGF1RP08069 1367 aa12.86□□□□□ -0.35
TTC41P-201ENST00000388789 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
TTC41P-201ENST00000388789 VPS8Q8N3P4 1428 aa12.86□□□□□ -0.35
TTC41P-201ENST00000388789 ZEB1P37275 1124 aaPredicted RBP12.85□□□□□ -0.35
TTC41P-201ENST00000388789 ABCA10Q8WWZ4 1543 aa12.83□□□□□ -0.36
TTC41P-201ENST00000388789 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
TTC41P-201ENST00000388789 REM2Q8IYK8 340 aaPredicted RBP12.81□□□□□ -0.36
TTC41P-201ENST00000388789 CARMIL1Q5VZK9 1371 aa12.8□□□□□ -0.36
TTC41P-201ENST00000388789 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
TTC41P-201ENST00000388789 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
TTC41P-201ENST00000388789 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
TTC41P-201ENST00000388789 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
TTC41P-201ENST00000388789 WDR97A6NE52 1622 aa12.74□□□□□ -0.37
TTC41P-201ENST00000388789 CUL7Q14999 1698 aa12.73□□□□□ -0.37
TTC41P-201ENST00000388789 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
TTC41P-201ENST00000388789 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
TTC41P-201ENST00000388789 IFT140Q96RY7 1462 aa12.71□□□□□ -0.37
TTC41P-201ENST00000388789 ARHGAP35Q9NRY4 1499 aa12.7□□□□□ -0.38
TTC41P-201ENST00000388789 TTBK1Q5TCY1 1321 aaPredicted RBP12.7□□□□□ -0.38
TTC41P-201ENST00000388789 ZNF608Q9ULD9 1512 aaPredicted RBP12.69□□□□□ -0.38
TTC41P-201ENST00000388789 FXR2P51116 673 aaKnown RBP eCLIP12.69□□□□□ -0.38
TTC41P-201ENST00000388789 ABCA5Q8WWZ7 1642 aa12.68□□□□□ -0.38
TTC41P-201ENST00000388789 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
TTC41P-201ENST00000388789 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
TTC41P-201ENST00000388789 TARBP1Q13395 1621 aaKnown RBP12.64□□□□□ -0.39
TTC41P-201ENST00000388789 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
TTC41P-201ENST00000388789 OSCARQ8IYS5 282 aa12.64□□□□□ -0.39
TTC41P-201ENST00000388789 MAP3K1Q13233 1512 aa12.62□□□□□ -0.39
TTC41P-201ENST00000388789 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
TTC41P-201ENST00000388789 EFCAB5A4FU69 1503 aa12.61□□□□□ -0.39
TTC41P-201ENST00000388789 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
TTC41P-201ENST00000388789 EVX2Q03828 476 aa12.61□□□□□ -0.39
TTC41P-201ENST00000388789 CCER1Q8TC90 406 aaPredicted RBP12.61□□□□□ -0.39
TTC41P-201ENST00000388789 AQRO60306 1485 aaKnown RBP eCLIP12.61□□□□□ -0.39
TTC41P-201ENST00000388789 FHAD1B1AJZ9 1412 aa12.6□□□□□ -0.39
TTC41P-201ENST00000388789 KANK4Q5T7N3 995 aaPredicted RBP12.56□□□□□ -0.4
TTC41P-201ENST00000388789 PBRM1Q86U86 1689 aa12.55□□□□□ -0.4
TTC41P-201ENST00000388789 TIAM1Q13009 1591 aa12.54□□□□□ -0.4
TTC41P-201ENST00000388789 MYT1Q01538 1121 aa12.54□□□□□ -0.4
TTC41P-201ENST00000388789 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
TTC41P-201ENST00000388789 FBLN2P98095 1184 aa12.53□□□□□ -0.4
TTC41P-201ENST00000388789 RRBP1Q9P2E9 1410 aaKnown RBP12.52□□□□□ -0.41
TTC41P-201ENST00000388789 FYCO1Q9BQS8 1478 aa12.51□□□□□ -0.41
TTC41P-201ENST00000388789 CASKIN1Q8WXD9 1431 aa12.51□□□□□ -0.41
TTC41P-201ENST00000388789 SAMD9Q5K651 1589 aa12.51□□□□□ -0.41
TTC41P-201ENST00000388789 FMN1Q68DA7 1419 aa12.5□□□□□ -0.41
TTC41P-201ENST00000388789 P3H3Q8IVL6 736 aa12.5□□□□□ -0.41
TTC41P-201ENST00000388789 ADAMTS12P58397 1594 aa12.5□□□□□ -0.41
TTC41P-201ENST00000388789 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
TTC41P-201ENST00000388789 CHD1O14646 1710 aa12.49□□□□□ -0.41
TTC41P-201ENST00000388789 CFAP43Q8NDM7 1665 aa12.49□□□□□ -0.41
TTC41P-201ENST00000388789 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
TTC41P-201ENST00000388789 LRRC9Q6ZRR7 1453 aa12.49□□□□□ -0.41
TTC41P-201ENST00000388789 SNAPC4Q5SXM2 1469 aa12.48□□□□□ -0.41
TTC41P-201ENST00000388789 CCNB3Q8WWL7 1395 aa12.46□□□□□ -0.41
TTC41P-201ENST00000388789 CHMP7Q8WUX9 453 aaPredicted RBP12.44□□□□□ -0.42
TTC41P-201ENST00000388789 MAGI1Q96QZ7 1491 aaPredicted RBP12.44□□□□□ -0.42
TTC41P-201ENST00000388789 RIMBP3CA6NJZ7 1639 aa12.43□□□□□ -0.42
TTC41P-201ENST00000388789 RIMBP3BA6NNM3 1639 aa12.43□□□□□ -0.42
TTC41P-201ENST00000388789 RIMBP3Q9UFD9 1639 aa12.43□□□□□ -0.42
TTC41P-201ENST00000388789 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
TTC41P-201ENST00000388789 LHX8Q68G74 356 aa12.43□□□□□ -0.42
TTC41P-201ENST00000388789 ARHGEF11O15085 1522 aa12.42□□□□□ -0.42
TTC41P-201ENST00000388789 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
TTC41P-201ENST00000388789 SYNJ2O15056 1496 aa12.4□□□□□ -0.42
TTC41P-201ENST00000388789 UGGT2Q9NYU1 1516 aa12.39□□□□□ -0.43
TTC41P-201ENST00000388789 PELP1Q8IZL8 1130 aaKnown RBP12.39□□□□□ -0.43
TTC41P-201ENST00000388789 CLSPNQ9HAW4 1339 aa12.38□□□□□ -0.43
TTC41P-201ENST00000388789 KIAA0586Q9BVV6 1533 aa12.38□□□□□ -0.43
TTC41P-201ENST00000388789 PHLDB1Q86UU1 1377 aa12.37□□□□□ -0.43
TTC41P-201ENST00000388789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.37□□□□□ -0.43
TTC41P-201ENST00000388789 SLC24A1O60721 1099 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms