RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
CDKL5-201ENST00000379989 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
CDKL5-201ENST00000379989 CUL7Q14999 1698 aa10.81□□□□□ -0.68
CDKL5-201ENST00000379989 ABCA10Q8WWZ4 1543 aa10.8□□□□□ -0.68
CDKL5-201ENST00000379989 DAXXQ9UER7 740 aaPredicted RBP10.79□□□□□ -0.68
CDKL5-201ENST00000379989 RUSC2Q8N2Y8 1516 aa10.79□□□□□ -0.68
CDKL5-201ENST00000379989 PLEKHG5O94827 1062 aa10.77□□□□□ -0.69
CDKL5-201ENST00000379989 VPS8Q8N3P4 1428 aa10.76□□□□□ -0.69
CDKL5-201ENST00000379989 FGD5Q6ZNL6 1462 aa10.76□□□□□ -0.69
CDKL5-201ENST00000379989 CLIP1P30622 1438 aa10.76□□□□□ -0.69
CDKL5-201ENST00000379989 TOPBP1Q92547 1522 aa10.76□□□□□ -0.69
CDKL5-201ENST00000379989 BCANQ96GW7 911 aa10.75□□□□□ -0.69
CDKL5-201ENST00000379989 PKNOX2Q96KN3 472 aa10.75□□□□□ -0.69
CDKL5-201ENST00000379989 MAP3K1Q13233 1512 aa10.75□□□□□ -0.69
CDKL5-201ENST00000379989 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.74□□□□□ -0.69
CDKL5-201ENST00000379989 RAPGEF2Q9Y4G8 1499 aa10.74□□□□□ -0.69
CDKL5-201ENST00000379989 UBTFP17480 764 aaKnown RBP10.72□□□□□ -0.69
CDKL5-201ENST00000379989 FANCIQ9NVI1 1328 aa10.71□□□□□ -0.69
CDKL5-201ENST00000379989 CUX2O14529 1486 aa10.71□□□□□ -0.69
CDKL5-201ENST00000379989 NESP48681 1621 aa10.71□□□□□ -0.7
CDKL5-201ENST00000379989 EFCAB5A4FU69 1503 aa10.71□□□□□ -0.7
CDKL5-201ENST00000379989 POLA1P09884 1462 aaPredicted RBP10.69□□□□□ -0.7
CDKL5-201ENST00000379989 IGF1RP08069 1367 aa10.69□□□□□ -0.7
CDKL5-201ENST00000379989 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
CDKL5-201ENST00000379989 WDR62O43379 1518 aa10.68□□□□□ -0.7
CDKL5-201ENST00000379989 CARMIL1Q5VZK9 1371 aa10.66□□□□□ -0.7
CDKL5-201ENST00000379989 IL27Q8NEV9 243 aa10.66□□□□□ -0.7
CDKL5-201ENST00000379989 MRC2Q9UBG0 1479 aa10.65□□□□□ -0.7
CDKL5-201ENST00000379989 URB2Q14146 1524 aaKnown RBP10.65□□□□□ -0.7
CDKL5-201ENST00000379989 CTTNBP2Q8WZ74 1663 aa10.65□□□□□ -0.7
CDKL5-201ENST00000379989 FKBP8Q14318 412 aa10.65□□□□□ -0.7
CDKL5-201ENST00000379989 PHF23Q9BUL5 403 aaPredicted RBP10.65□□□□□ -0.7
CDKL5-201ENST00000379989 AQRO60306 1485 aaKnown RBP eCLIP10.64□□□□□ -0.71
CDKL5-201ENST00000379989 PODXL2Q9NZ53 605 aa10.64□□□□□ -0.71
CDKL5-201ENST00000379989 FHAD1B1AJZ9 1412 aa10.64□□□□□ -0.71
CDKL5-201ENST00000379989 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
CDKL5-201ENST00000379989 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
CDKL5-201ENST00000379989 ARAP1Q96P48 1450 aa10.61□□□□□ -0.71
CDKL5-201ENST00000379989 IFT140Q96RY7 1462 aa10.6□□□□□ -0.71
CDKL5-201ENST00000379989 ITGAEP38570 1179 aa10.6□□□□□ -0.71
CDKL5-201ENST00000379989 SENP3Q9H4L4 574 aaPredicted RBP10.59□□□□□ -0.71
CDKL5-201ENST00000379989 GAPVD1Q14C86 1478 aa10.58□□□□□ -0.72
CDKL5-201ENST00000379989 ARHGAP35Q9NRY4 1499 aa10.57□□□□□ -0.72
CDKL5-201ENST00000379989 PBRM1Q86U86 1689 aa10.56□□□□□ -0.72
CDKL5-201ENST00000379989 CFAP43Q8NDM7 1665 aa10.55□□□□□ -0.72
CDKL5-201ENST00000379989 FYCO1Q9BQS8 1478 aa10.55□□□□□ -0.72
CDKL5-201ENST00000379989 SAMD9Q5K651 1589 aa10.54□□□□□ -0.72
CDKL5-201ENST00000379989 FMN1Q68DA7 1419 aa10.54□□□□□ -0.72
CDKL5-201ENST00000379989 NBR1Q14596 966 aa10.53□□□□□ -0.72
CDKL5-201ENST00000379989 EHMT2Q96KQ7 1210 aa10.53□□□□□ -0.72
CDKL5-201ENST00000379989 GRIN2BQ13224 1484 aa10.53□□□□□ -0.72
CDKL5-201ENST00000379989 RAD54L2Q9Y4B4 1467 aa10.52□□□□□ -0.72
CDKL5-201ENST00000379989 ADAMTS12P58397 1594 aa10.52□□□□□ -0.73
CDKL5-201ENST00000379989 TIAM1Q13009 1591 aa10.51□□□□□ -0.73
CDKL5-201ENST00000379989 RRBP1Q9P2E9 1410 aaKnown RBP10.51□□□□□ -0.73
CDKL5-201ENST00000379989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDKL5-201ENST00000379989 CASKIN1Q8WXD9 1431 aa10.5□□□□□ -0.73
CDKL5-201ENST00000379989 NEFLP07196 543 aa10.48□□□□□ -0.73
CDKL5-201ENST00000379989 MAGI1Q96QZ7 1491 aaPredicted RBP10.48□□□□□ -0.73
CDKL5-201ENST00000379989 KCNH8Q96L42 1107 aa10.47□□□□□ -0.73
CDKL5-201ENST00000379989 UGGT2Q9NYU1 1516 aa10.46□□□□□ -0.74
CDKL5-201ENST00000379989 CCDC18Q5T9S5 1454 aa10.46□□□□□ -0.74
CDKL5-201ENST00000379989 IQGAP2Q13576 1575 aa10.45□□□□□ -0.74
CDKL5-201ENST00000379989 CDK11AQ9UQ88 783 aaPredicted RBP10.44□□□□□ -0.74
CDKL5-201ENST00000379989 NOP58Q9Y2X3 529 aaKnown RBP10.44□□□□□ -0.74
CDKL5-201ENST00000379989 LRRC9Q6ZRR7 1453 aa10.43□□□□□ -0.74
CDKL5-201ENST00000379989 PAK3O75914 559 aaPredicted RBP10.43□□□□□ -0.74
CDKL5-201ENST00000379989 PCF11O94913 1555 aaKnown RBP10.42□□□□□ -0.74
CDKL5-201ENST00000379989 KIAA0586Q9BVV6 1533 aa10.41□□□□□ -0.74
CDKL5-201ENST00000379989 ZMYND15Q9H091 742 aa10.41□□□□□ -0.74
CDKL5-201ENST00000379989 HECW1Q76N89 1606 aa10.41□□□□□ -0.74
CDKL5-201ENST00000379989 ERCC6Q03468 1493 aa10.4□□□□□ -0.74
CDKL5-201ENST00000379989 EIF4G3O43432 1585 aaKnown RBP10.4□□□□□ -0.74
CDKL5-201ENST00000379989 SNAPC4Q5SXM2 1469 aa10.4□□□□□ -0.74
CDKL5-201ENST00000379989 EHBP1L1Q8N3D4 1523 aa10.39□□□□□ -0.75
CDKL5-201ENST00000379989 RTL5Q5HYW3 569 aaPredicted RBP10.39□□□□□ -0.75
CDKL5-201ENST00000379989 TIMELESSQ9UNS1 1208 aa10.39□□□□□ -0.75
CDKL5-201ENST00000379989 TDRD9Q8NDG6 1382 aaKnown RBP10.38□□□□□ -0.75
CDKL5-201ENST00000379989 CCNB3Q8WWL7 1395 aa10.38□□□□□ -0.75
CDKL5-201ENST00000379989 C11orf95C9JLR9 678 aaPredicted RBP10.37□□□□□ -0.75
CDKL5-201ENST00000379989 SYNJ2O15056 1496 aa10.37□□□□□ -0.75
CDKL5-201ENST00000379989 GRIN2AQ12879 1464 aa10.36□□□□□ -0.75
CDKL5-201ENST00000379989 SUPT6HQ7KZ85 1726 aaKnown RBP10.35□□□□□ -0.75
CDKL5-201ENST00000379989 VSIG10Q8N0Z9 540 aa10.34□□□□□ -0.75
CDKL5-201ENST00000379989 GLIPR1L2Q4G1C9 344 aa10.34□□□□□ -0.75
CDKL5-201ENST00000379989 WASHC2AQ641Q2 1341 aa10.34□□□□□ -0.75
CDKL5-201ENST00000379989 ARHGEF11O15085 1522 aa10.33□□□□□ -0.76
CDKL5-201ENST00000379989 KIAA0556O60303 1618 aa10.32□□□□□ -0.76
CDKL5-201ENST00000379989 NUP160Q12769 1436 aa10.32□□□□□ -0.76
CDKL5-201ENST00000379989 FHOD3Q2V2M9 1422 aa10.31□□□□□ -0.76
CDKL5-201ENST00000379989 RSPH6AQ9H0K4 717 aa10.31□□□□□ -0.76
CDKL5-201ENST00000379989 WASHC2CQ9Y4E1 1318 aa10.31□□□□□ -0.76
CDKL5-201ENST00000379989 CHD1O14646 1710 aa10.31□□□□□ -0.76
CDKL5-201ENST00000379989 BRPF3Q9ULD4 1205 aa10.3□□□□□ -0.76
CDKL5-201ENST00000379989 AKNAQ7Z591 1439 aa10.3□□□□□ -0.76
CDKL5-201ENST00000379989 MIA2Q96PC5 1412 aa10.3□□□□□ -0.76
CDKL5-201ENST00000379989 CARMIL2Q6F5E8 1435 aa10.29□□□□□ -0.76
CDKL5-201ENST00000379989 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
CDKL5-201ENST00000379989 ZNF608Q9ULD9 1512 aaPredicted RBP10.27□□□□□ -0.77
CDKL5-201ENST00000379989 KANK4Q5T7N3 995 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms