RNA–Protein interactions for RNA: ENST00000377031.7

C9orf85-203, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3 BASIC

Gene C9orf85, Length 1,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-203ENST00000377031 SPDYE6P0CI01 402 aa18.27■□□□□ 0.52
C9orf85-203ENST00000377031 SPDYE2Q495Y8 402 aa18.27■□□□□ 0.52
C9orf85-203ENST00000377031 WDR62O43379 1518 aa18.27■□□□□ 0.51
C9orf85-203ENST00000377031 PITPNM1O00562 1244 aa18.26■□□□□ 0.51
C9orf85-203ENST00000377031 PIP4P2Q8N4L2 257 aa18.19■□□□□ 0.5
C9orf85-203ENST00000377031 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
C9orf85-203ENST00000377031 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
C9orf85-203ENST00000377031 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
C9orf85-203ENST00000377031 FXR2P51116 673 aaKnown RBP eCLIP18.11■□□□□ 0.49
C9orf85-203ENST00000377031 SSUH2Q9Y2M2 353 aa18.11■□□□□ 0.49
C9orf85-203ENST00000377031 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
C9orf85-203ENST00000377031 ZNF692Q9BU19 519 aaPredicted RBP18.04■□□□□ 0.48
C9orf85-203ENST00000377031 TOPBP1Q92547 1522 aa18.03■□□□□ 0.48
C9orf85-203ENST00000377031 DNMBPQ6XZF7 1577 aa18.03■□□□□ 0.48
C9orf85-203ENST00000377031 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
C9orf85-203ENST00000377031 SPDYE1Q8NFV5 336 aaPredicted RBP17.91■□□□□ 0.46
C9orf85-203ENST00000377031 POLA1P09884 1462 aaPredicted RBP17.88■□□□□ 0.45
C9orf85-203ENST00000377031 CUX1P39880 1505 aa17.88■□□□□ 0.45
C9orf85-203ENST00000377031 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
C9orf85-203ENST00000377031 DNAJC5Q9H3Z4 198 aa17.86■□□□□ 0.45
C9orf85-203ENST00000377031 CLEC11AQ9Y240 323 aa17.86■□□□□ 0.45
C9orf85-203ENST00000377031 SP7Q8TDD2 431 aaPredicted RBP17.84■□□□□ 0.45
C9orf85-203ENST00000377031 WDR97A6NE52 1622 aa17.82■□□□□ 0.44
C9orf85-203ENST00000377031 FGD5Q6ZNL6 1462 aa17.82■□□□□ 0.44
C9orf85-203ENST00000377031 ZNF608Q9ULD9 1512 aaPredicted RBP17.81■□□□□ 0.44
C9orf85-203ENST00000377031 SOGA1O94964 1423 aa17.79■□□□□ 0.44
C9orf85-203ENST00000377031 BIVM-ERCC5R4GMW8 1640 aa17.78■□□□□ 0.44
C9orf85-203ENST00000377031 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
C9orf85-203ENST00000377031 TOP2BQ02880 1626 aa17.76■□□□□ 0.43
C9orf85-203ENST00000377031 HAX1O00165 279 aa17.76■□□□□ 0.43
C9orf85-203ENST00000377031 WRNQ14191 1432 aaPredicted RBP eCLIP17.75■□□□□ 0.43
C9orf85-203ENST00000377031 PRKAR2AP13861 404 aaKnown RBP17.75■□□□□ 0.43
C9orf85-203ENST00000377031 RAD54L2Q9Y4B4 1467 aa17.75■□□□□ 0.43
C9orf85-203ENST00000377031 EVX2Q03828 476 aa17.71■□□□□ 0.43
C9orf85-203ENST00000377031 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
C9orf85-203ENST00000377031 ABCA10Q8WWZ4 1543 aa17.7■□□□□ 0.42
C9orf85-203ENST00000377031 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.42
C9orf85-203ENST00000377031 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
C9orf85-203ENST00000377031 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
C9orf85-203ENST00000377031 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
C9orf85-203ENST00000377031 CHADLQ6NUI6 762 aa17.6■□□□□ 0.41
C9orf85-203ENST00000377031 GAPVD1Q14C86 1478 aa17.59■□□□□ 0.41
C9orf85-203ENST00000377031 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
C9orf85-203ENST00000377031 PRR29P0C7W0 189 aa17.58■□□□□ 0.4
C9orf85-203ENST00000377031 PBRM1Q86U86 1689 aa17.56■□□□□ 0.4
C9orf85-203ENST00000377031 SNAPC4Q5SXM2 1469 aa17.55■□□□□ 0.4
C9orf85-203ENST00000377031 CHD1O14646 1710 aa17.53■□□□□ 0.4
C9orf85-203ENST00000377031 C19orf67A6NJJ6 358 aa17.52■□□□□ 0.4
C9orf85-203ENST00000377031 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
C9orf85-203ENST00000377031 ERICH3Q5RHP9 1530 aa17.5■□□□□ 0.39
C9orf85-203ENST00000377031 SPDYE4A6NLX3 237 aa17.46■□□□□ 0.39
C9orf85-203ENST00000377031 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
C9orf85-203ENST00000377031 CHMP7Q8WUX9 453 aaPredicted RBP17.42■□□□□ 0.38
C9orf85-203ENST00000377031 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
C9orf85-203ENST00000377031 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
C9orf85-203ENST00000377031 KIF27Q86VH2 1401 aa17.39■□□□□ 0.38
C9orf85-203ENST00000377031 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
C9orf85-203ENST00000377031 IGF1RP08069 1367 aa17.34■□□□□ 0.37
C9orf85-203ENST00000377031 NUP160Q12769 1436 aa17.34■□□□□ 0.37
C9orf85-203ENST00000377031 RIMBP3CA6NJZ7 1639 aa17.33■□□□□ 0.37
C9orf85-203ENST00000377031 RIMBP3BA6NNM3 1639 aa17.33■□□□□ 0.37
C9orf85-203ENST00000377031 RIMBP3Q9UFD9 1639 aa17.33■□□□□ 0.37
C9orf85-203ENST00000377031 ARHGEF11O15085 1522 aa17.33■□□□□ 0.37
C9orf85-203ENST00000377031 FARP1Q9Y4F1 1045 aaPredicted RBP17.33■□□□□ 0.36
C9orf85-203ENST00000377031 CUL7Q14999 1698 aa17.32■□□□□ 0.36
C9orf85-203ENST00000377031 CEP170Q5SW79 1584 aa17.28■□□□□ 0.36
C9orf85-203ENST00000377031 CREBZFQ9NS37 354 aa17.27■□□□□ 0.36
C9orf85-203ENST00000377031 STAG3Q9UJ98 1225 aa17.26■□□□□ 0.35
C9orf85-203ENST00000377031 GABBR2O75899 941 aa17.24■□□□□ 0.35
C9orf85-203ENST00000377031 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
C9orf85-203ENST00000377031 SHROOM2Q13796 1616 aa17.23■□□□□ 0.35
C9orf85-203ENST00000377031 CARMIL1Q5VZK9 1371 aa17.21■□□□□ 0.35
C9orf85-203ENST00000377031 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
C9orf85-203ENST00000377031 RUSC2Q8N2Y8 1516 aa17.18■□□□□ 0.34
C9orf85-203ENST00000377031 CD44P16070 742 aaKnown RBP17.18■□□□□ 0.34
C9orf85-203ENST00000377031 PROM2Q8N271 834 aa17.17■□□□□ 0.34
C9orf85-203ENST00000377031 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
C9orf85-203ENST00000377031 RAPGEF2Q9Y4G8 1499 aa17.12■□□□□ 0.33
C9orf85-203ENST00000377031 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
C9orf85-203ENST00000377031 EEA1Q15075 1411 aa17.1■□□□□ 0.33
C9orf85-203ENST00000377031 PRXQ9BXM0 1461 aa17.1■□□□□ 0.33
C9orf85-203ENST00000377031 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
C9orf85-203ENST00000377031 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
C9orf85-203ENST00000377031 PRG4Q92954 1404 aaPredicted RBP17.05■□□□□ 0.32
C9orf85-203ENST00000377031 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
C9orf85-203ENST00000377031 IQGAP2Q13576 1575 aa17.02■□□□□ 0.32
C9orf85-203ENST00000377031 UGGT2Q9NYU1 1516 aa16.98■□□□□ 0.31
C9orf85-203ENST00000377031 CTTNBP2Q8WZ74 1663 aa16.97■□□□□ 0.31
C9orf85-203ENST00000377031 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
C9orf85-203ENST00000377031 POTEIP0CG38 1075 aa16.96■□□□□ 0.31
C9orf85-203ENST00000377031 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
C9orf85-203ENST00000377031 CARMIL2Q6F5E8 1435 aa16.94■□□□□ 0.3
C9orf85-203ENST00000377031 DISP1Q96F81 1524 aa16.92■□□□□ 0.3
C9orf85-203ENST00000377031 KIF21BO75037 1637 aa16.91■□□□□ 0.3
C9orf85-203ENST00000377031 TNIKQ9UKE5 1360 aa16.89■□□□□ 0.3
C9orf85-203ENST00000377031 CLCN6P51797 869 aa16.87■□□□□ 0.29
C9orf85-203ENST00000377031 KIAA0556O60303 1618 aa16.87■□□□□ 0.29
C9orf85-203ENST00000377031 PTPRGP23470 1445 aa16.86■□□□□ 0.29
C9orf85-203ENST00000377031 GOLGA3Q08378 1498 aa16.86■□□□□ 0.29
C9orf85-203ENST00000377031 ADCY10Q96PN6 1610 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms