RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 DHX57Q6P158 1386 aaKnown RBP17.42■□□□□ 0.38
PRDM2-204ENST00000376048 RAD54L2Q9Y4B4 1467 aa17.39■□□□□ 0.38
PRDM2-204ENST00000376048 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.37
PRDM2-204ENST00000376048 SUPT16HQ9Y5B9 1047 aaKnown RBP17.39■□□□□ 0.37
PRDM2-204ENST00000376048 ERICH3Q5RHP9 1530 aa17.39■□□□□ 0.37
PRDM2-204ENST00000376048 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
PRDM2-204ENST00000376048 ARHGAP35Q9NRY4 1499 aa17.37■□□□□ 0.37
PRDM2-204ENST00000376048 CARMIL1Q5VZK9 1371 aa17.35■□□□□ 0.37
PRDM2-204ENST00000376048 KCNH8Q96L42 1107 aa17.32■□□□□ 0.36
PRDM2-204ENST00000376048 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.35
PRDM2-204ENST00000376048 AMER1Q5JTC6 1135 aaPredicted RBP17.24■□□□□ 0.35
PRDM2-204ENST00000376048 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
PRDM2-204ENST00000376048 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
PRDM2-204ENST00000376048 PRDM2Q13029 1718 aa17.22■□□□□ 0.35
PRDM2-204ENST00000376048 TOPBP1Q92547 1522 aa17.22■□□□□ 0.35
PRDM2-204ENST00000376048 TSHZ2Q9NRE2 1034 aa17.21■□□□□ 0.35
PRDM2-204ENST00000376048 ZBTB22O15209 634 aa17.2■□□□□ 0.34
PRDM2-204ENST00000376048 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
PRDM2-204ENST00000376048 FOXD1Q16676 465 aa17.19■□□□□ 0.34
PRDM2-204ENST00000376048 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
PRDM2-204ENST00000376048 BCANQ96GW7 911 aa17.18■□□□□ 0.34
PRDM2-204ENST00000376048 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
PRDM2-204ENST00000376048 FAM50AQ14320 339 aaKnown RBP17.16■□□□□ 0.34
PRDM2-204ENST00000376048 CCNB3Q8WWL7 1395 aa17.15■□□□□ 0.34
PRDM2-204ENST00000376048 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
PRDM2-204ENST00000376048 DNMBPQ6XZF7 1577 aa17.13■□□□□ 0.33
PRDM2-204ENST00000376048 PHLDB1Q86UU1 1377 aa17.12■□□□□ 0.33
PRDM2-204ENST00000376048 DAXXQ9UER7 740 aaPredicted RBP17.11■□□□□ 0.33
PRDM2-204ENST00000376048 RAB3GAP2Q9H2M9 1393 aa17.1■□□□□ 0.33
PRDM2-204ENST00000376048 ARID3CA6NKF2 412 aa17.1■□□□□ 0.33
PRDM2-204ENST00000376048 ABCA10Q8WWZ4 1543 aa17.09■□□□□ 0.33
PRDM2-204ENST00000376048 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
PRDM2-204ENST00000376048 SIN3AQ96ST3 1273 aa17.08■□□□□ 0.33
PRDM2-204ENST00000376048 HIRIP3Q9BW71 556 aaPredicted RBP17.08■□□□□ 0.33
PRDM2-204ENST00000376048 PRKCSHP14314 528 aaPredicted RBP17.07■□□□□ 0.32
PRDM2-204ENST00000376048 MAPKBP1O60336 1514 aa17.07■□□□□ 0.32
PRDM2-204ENST00000376048 PPP4R3CPQ6ZMV5 832 aa17.05■□□□□ 0.32
PRDM2-204ENST00000376048 TIAM1Q13009 1591 aa17.05■□□□□ 0.32
PRDM2-204ENST00000376048 PCF11O94913 1555 aaKnown RBP17.04■□□□□ 0.32
PRDM2-204ENST00000376048 LAMC3Q9Y6N6 1575 aa17.04■□□□□ 0.32
PRDM2-204ENST00000376048 LRRC9Q6ZRR7 1453 aa17.04■□□□□ 0.32
PRDM2-204ENST00000376048 FKBP8Q14318 412 aa17.04■□□□□ 0.32
PRDM2-204ENST00000376048 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
PRDM2-204ENST00000376048 BCL11AQ9H165 835 aa17■□□□□ 0.31
PRDM2-204ENST00000376048 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
PRDM2-204ENST00000376048 GAPVD1Q14C86 1478 aa16.98■□□□□ 0.31
PRDM2-204ENST00000376048 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.31
PRDM2-204ENST00000376048 TRIM52Q96A61 297 aa16.97■□□□□ 0.31
PRDM2-204ENST00000376048 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
PRDM2-204ENST00000376048 KIF21AQ7Z4S6 1674 aa16.97■□□□□ 0.31
PRDM2-204ENST00000376048 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.31
PRDM2-204ENST00000376048 SETD5Q9C0A6 1442 aa16.94■□□□□ 0.3
PRDM2-204ENST00000376048 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
PRDM2-204ENST00000376048 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
PRDM2-204ENST00000376048 MTUS2Q5JR59 1369 aa16.87■□□□□ 0.29
PRDM2-204ENST00000376048 NPM3O75607 178 aaKnown RBP16.87■□□□□ 0.29
PRDM2-204ENST00000376048 ABCA5Q8WWZ7 1642 aa16.87■□□□□ 0.29
PRDM2-204ENST00000376048 CUL7Q14999 1698 aa16.86■□□□□ 0.29
PRDM2-204ENST00000376048 FYCO1Q9BQS8 1478 aa16.85■□□□□ 0.29
PRDM2-204ENST00000376048 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
PRDM2-204ENST00000376048 CHIC2Q9UKJ5 165 aa16.84■□□□□ 0.29
PRDM2-204ENST00000376048 RBM19Q9Y4C8 960 aaKnown RBP16.84■□□□□ 0.29
PRDM2-204ENST00000376048 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
PRDM2-204ENST00000376048 CTTNBP2Q8WZ74 1663 aa16.84■□□□□ 0.29
PRDM2-204ENST00000376048 MAP3K1Q13233 1512 aa16.84■□□□□ 0.29
PRDM2-204ENST00000376048 PTPRKQ15262 1439 aa16.82■□□□□ 0.28
PRDM2-204ENST00000376048 CFAP43Q8NDM7 1665 aa16.82■□□□□ 0.28
PRDM2-204ENST00000376048 FMN1Q68DA7 1419 aa16.82■□□□□ 0.28
PRDM2-204ENST00000376048 NEFLP07196 543 aa16.81■□□□□ 0.28
PRDM2-204ENST00000376048 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
PRDM2-204ENST00000376048 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
PRDM2-204ENST00000376048 ANP32CO43423 234 aa16.8■□□□□ 0.28
PRDM2-204ENST00000376048 RRP7BPQ9NSQ0 103 aa16.79■□□□□ 0.28
PRDM2-204ENST00000376048 FBLN2P98095 1184 aa16.78■□□□□ 0.28
PRDM2-204ENST00000376048 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
PRDM2-204ENST00000376048 LRRIQ1Q96JM4 1722 aa16.78■□□□□ 0.28
PRDM2-204ENST00000376048 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
PRDM2-204ENST00000376048 MAGI3Q5TCQ9 1506 aa16.75■□□□□ 0.27
PRDM2-204ENST00000376048 CCER2I3L3R5 266 aa16.74■□□□□ 0.27
PRDM2-204ENST00000376048 NCOA2Q15596 1464 aa16.74■□□□□ 0.27
PRDM2-204ENST00000376048 SAMD9Q5K651 1589 aa16.73■□□□□ 0.27
PRDM2-204ENST00000376048 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
PRDM2-204ENST00000376048 CDK13Q14004 1512 aaKnown RBP16.72■□□□□ 0.27
PRDM2-204ENST00000376048 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
PRDM2-204ENST00000376048 ERCC6Q03468 1493 aa16.7■□□□□ 0.26
PRDM2-204ENST00000376048 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
PRDM2-204ENST00000376048 MSH5O43196 834 aa16.7■□□□□ 0.26
PRDM2-204ENST00000376048 TIMELESSQ9UNS1 1208 aa16.69■□□□□ 0.26
PRDM2-204ENST00000376048 HNRNPUQ00839 825 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRDM2-204ENST00000376048 PBRM1Q86U86 1689 aa16.67■□□□□ 0.26
PRDM2-204ENST00000376048 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
PRDM2-204ENST00000376048 MYOM3Q5VTT5 1437 aa16.66■□□□□ 0.26
PRDM2-204ENST00000376048 CCDC18Q5T9S5 1454 aa16.65■□□□□ 0.26
PRDM2-204ENST00000376048 ADAMTS12P58397 1594 aa16.64■□□□□ 0.25
PRDM2-204ENST00000376048 IQGAP2Q13576 1575 aa16.64■□□□□ 0.25
PRDM2-204ENST00000376048 NAIPQ13075 1403 aa16.62■□□□□ 0.25
PRDM2-204ENST00000376048 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
PRDM2-204ENST00000376048 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
PRDM2-204ENST00000376048 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
PRDM2-204ENST00000376048 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 357.4 ms