RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 MAP3K1Q13233 1512 aa18.01■□□□□ 0.47
TNFSF13B-201ENST00000375887 MAPKBP1O60336 1514 aa18■□□□□ 0.47
TNFSF13B-201ENST00000375887 FAM50AQ14320 339 aaKnown RBP17.96■□□□□ 0.47
TNFSF13B-201ENST00000375887 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.47
TNFSF13B-201ENST00000375887 FANCD2Q9BXW9 1451 aa17.96■□□□□ 0.47
TNFSF13B-201ENST00000375887 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
TNFSF13B-201ENST00000375887 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
TNFSF13B-201ENST00000375887 CC2D2AQ9P2K1 1620 aa17.93■□□□□ 0.46
TNFSF13B-201ENST00000375887 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
TNFSF13B-201ENST00000375887 FHOD3Q2V2M9 1422 aa17.92■□□□□ 0.46
TNFSF13B-201ENST00000375887 KCNH8Q96L42 1107 aa17.91■□□□□ 0.46
TNFSF13B-201ENST00000375887 PCF11O94913 1555 aaKnown RBP17.91■□□□□ 0.46
TNFSF13B-201ENST00000375887 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
TNFSF13B-201ENST00000375887 NESP48681 1621 aa17.87■□□□□ 0.45
TNFSF13B-201ENST00000375887 HIRIP3Q9BW71 556 aaPredicted RBP17.86■□□□□ 0.45
TNFSF13B-201ENST00000375887 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
TNFSF13B-201ENST00000375887 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
TNFSF13B-201ENST00000375887 CFAP43Q8NDM7 1665 aa17.85■□□□□ 0.45
TNFSF13B-201ENST00000375887 SUPT16HQ9Y5B9 1047 aaKnown RBP17.85■□□□□ 0.45
TNFSF13B-201ENST00000375887 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
TNFSF13B-201ENST00000375887 DNMBPQ6XZF7 1577 aa17.84■□□□□ 0.45
TNFSF13B-201ENST00000375887 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
TNFSF13B-201ENST00000375887 FYCO1Q9BQS8 1478 aa17.8■□□□□ 0.44
TNFSF13B-201ENST00000375887 DDX10Q13206 875 aaKnown RBP17.8■□□□□ 0.44
TNFSF13B-201ENST00000375887 EFCAB5A4FU69 1503 aa17.76■□□□□ 0.43
TNFSF13B-201ENST00000375887 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.43
TNFSF13B-201ENST00000375887 PPP1R15AO75807 674 aaPredicted RBP17.75■□□□□ 0.43
TNFSF13B-201ENST00000375887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.74■□□□□ 0.43
TNFSF13B-201ENST00000375887 TDRD9Q8NDG6 1382 aaKnown RBP17.74■□□□□ 0.43
TNFSF13B-201ENST00000375887 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
TNFSF13B-201ENST00000375887 PTPRKQ15262 1439 aa17.73■□□□□ 0.43
TNFSF13B-201ENST00000375887 FGD6Q6ZV73 1430 aa17.73■□□□□ 0.43
TNFSF13B-201ENST00000375887 TIMELESSQ9UNS1 1208 aa17.72■□□□□ 0.43
TNFSF13B-201ENST00000375887 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
TNFSF13B-201ENST00000375887 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
TNFSF13B-201ENST00000375887 CUL7Q14999 1698 aa17.71■□□□□ 0.43
TNFSF13B-201ENST00000375887 FMN1Q68DA7 1419 aa17.71■□□□□ 0.43
TNFSF13B-201ENST00000375887 CTTNBP2Q8WZ74 1663 aa17.69■□□□□ 0.42
TNFSF13B-201ENST00000375887 MTUS2Q5JR59 1369 aa17.69■□□□□ 0.42
TNFSF13B-201ENST00000375887 CCDC18Q5T9S5 1454 aa17.63■□□□□ 0.41
TNFSF13B-201ENST00000375887 HFM1A2PYH4 1435 aa17.63■□□□□ 0.41
TNFSF13B-201ENST00000375887 ARID3CA6NKF2 412 aa17.63■□□□□ 0.41
TNFSF13B-201ENST00000375887 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
TNFSF13B-201ENST00000375887 LRRIQ1Q96JM4 1722 aa17.62■□□□□ 0.41
TNFSF13B-201ENST00000375887 NCOA2Q15596 1464 aa17.61■□□□□ 0.41
TNFSF13B-201ENST00000375887 BCANQ96GW7 911 aa17.61■□□□□ 0.41
TNFSF13B-201ENST00000375887 SAMD9Q5K651 1589 aa17.61■□□□□ 0.41
TNFSF13B-201ENST00000375887 GRIN2BQ13224 1484 aa17.61■□□□□ 0.41
TNFSF13B-201ENST00000375887 ABCA5Q8WWZ7 1642 aa17.6■□□□□ 0.41
TNFSF13B-201ENST00000375887 NAIPQ13075 1403 aa17.6■□□□□ 0.41
TNFSF13B-201ENST00000375887 TONSLQ96HA7 1378 aa17.59■□□□□ 0.41
TNFSF13B-201ENST00000375887 UACAQ9BZF9 1416 aa17.59■□□□□ 0.41
TNFSF13B-201ENST00000375887 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
TNFSF13B-201ENST00000375887 LAMC3Q9Y6N6 1575 aa17.58■□□□□ 0.4
TNFSF13B-201ENST00000375887 PTPN23Q9H3S7 1636 aa17.58■□□□□ 0.4
TNFSF13B-201ENST00000375887 TSHZ2Q9NRE2 1034 aa17.57■□□□□ 0.4
TNFSF13B-201ENST00000375887 CHIC2Q9UKJ5 165 aa17.55■□□□□ 0.4
TNFSF13B-201ENST00000375887 MAGI3Q5TCQ9 1506 aa17.54■□□□□ 0.4
TNFSF13B-201ENST00000375887 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
TNFSF13B-201ENST00000375887 ANP32CO43423 234 aa17.54■□□□□ 0.4
TNFSF13B-201ENST00000375887 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
TNFSF13B-201ENST00000375887 CCER2I3L3R5 266 aa17.53■□□□□ 0.4
TNFSF13B-201ENST00000375887 FKBP8Q14318 412 aa17.52■□□□□ 0.4
TNFSF13B-201ENST00000375887 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.39
TNFSF13B-201ENST00000375887 KDM5BQ9UGL1 1544 aa17.51■□□□□ 0.39
TNFSF13B-201ENST00000375887 UGGT2Q9NYU1 1516 aa17.49■□□□□ 0.39
TNFSF13B-201ENST00000375887 SUPT6HQ7KZ85 1726 aaKnown RBP17.49■□□□□ 0.39
TNFSF13B-201ENST00000375887 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
TNFSF13B-201ENST00000375887 EHBP1L1Q8N3D4 1523 aa17.49■□□□□ 0.39
TNFSF13B-201ENST00000375887 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
TNFSF13B-201ENST00000375887 DENND4BO75064 1496 aaPredicted RBP17.47■□□□□ 0.39
TNFSF13B-201ENST00000375887 TARBP1Q13395 1621 aaKnown RBP17.46■□□□□ 0.39
TNFSF13B-201ENST00000375887 KIF21AQ7Z4S6 1674 aa17.45■□□□□ 0.38
TNFSF13B-201ENST00000375887 FOXD1Q16676 465 aa17.42■□□□□ 0.38
TNFSF13B-201ENST00000375887 KDM6BO15054 1643 aa17.42■□□□□ 0.38
TNFSF13B-201ENST00000375887 TCOF1Q13428 1488 aaKnown RBP17.42■□□□□ 0.38
TNFSF13B-201ENST00000375887 EPRSP07814 1512 aaKnown RBP17.4■□□□□ 0.38
TNFSF13B-201ENST00000375887 CDK13Q14004 1512 aaKnown RBP17.4■□□□□ 0.38
TNFSF13B-201ENST00000375887 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
TNFSF13B-201ENST00000375887 WASHC2AQ641Q2 1341 aa17.4■□□□□ 0.38
TNFSF13B-201ENST00000375887 MPHOSPH9Q99550 1183 aa17.38■□□□□ 0.37
TNFSF13B-201ENST00000375887 IQGAP2Q13576 1575 aa17.36■□□□□ 0.37
TNFSF13B-201ENST00000375887 L3MBTL2Q969R5 705 aa17.35■□□□□ 0.37
TNFSF13B-201ENST00000375887 HECW1Q76N89 1606 aa17.35■□□□□ 0.37
TNFSF13B-201ENST00000375887 NEFLP07196 543 aa17.34■□□□□ 0.37
TNFSF13B-201ENST00000375887 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
TNFSF13B-201ENST00000375887 GCC2Q8IWJ2 1684 aa17.33■□□□□ 0.36
TNFSF13B-201ENST00000375887 AKNAQ7Z591 1439 aa17.33■□□□□ 0.36
TNFSF13B-201ENST00000375887 MIA2Q96PC5 1412 aa17.33■□□□□ 0.36
TNFSF13B-201ENST00000375887 PBRM1Q86U86 1689 aa17.33■□□□□ 0.36
TNFSF13B-201ENST00000375887 ZNF644Q9H582 1327 aaPredicted RBP17.32■□□□□ 0.36
TNFSF13B-201ENST00000375887 WDR62O43379 1518 aa17.32■□□□□ 0.36
TNFSF13B-201ENST00000375887 ADAMTS12P58397 1594 aa17.31■□□□□ 0.36
TNFSF13B-201ENST00000375887 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.36
TNFSF13B-201ENST00000375887 HNRNPUQ00839 825 aaKnown RBP eCLIP17.31■□□□□ 0.36
TNFSF13B-201ENST00000375887 CCDC184Q52MB2 194 aa17.3■□□□□ 0.36
TNFSF13B-201ENST00000375887 IRX6P78412 446 aaPredicted RBP17.29■□□□□ 0.36
TNFSF13B-201ENST00000375887 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
TNFSF13B-201ENST00000375887 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
TNFSF13B-201ENST00000375887 ZNF608Q9ULD9 1512 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms