RNA–Protein interactions for RNA: ENST00000373620.7

DENND1A-202, Transcript of DENN domain containing 1A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DENND1A, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1A-202ENST00000373620 ERICH6Q7L0X2 663 aa23.8■■□□□ 1.4
DENND1A-202ENST00000373620 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
DENND1A-202ENST00000373620 TARBP1Q13395 1621 aaKnown RBP23.78■■□□□ 1.4
DENND1A-202ENST00000373620 IGF1RP08069 1367 aa23.78■■□□□ 1.4
DENND1A-202ENST00000373620 PRXQ9BXM0 1461 aa23.77■■□□□ 1.4
DENND1A-202ENST00000373620 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
DENND1A-202ENST00000373620 FKBP8Q14318 412 aa23.73■■□□□ 1.39
DENND1A-202ENST00000373620 TNIKQ9UKE5 1360 aa23.71■■□□□ 1.39
DENND1A-202ENST00000373620 ABCA5Q8WWZ7 1642 aa23.7■■□□□ 1.38
DENND1A-202ENST00000373620 ERICH3Q5RHP9 1530 aa23.68■■□□□ 1.38
DENND1A-202ENST00000373620 GAPVD1Q14C86 1478 aa23.66■■□□□ 1.38
DENND1A-202ENST00000373620 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
DENND1A-202ENST00000373620 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
DENND1A-202ENST00000373620 ZNF608Q9ULD9 1512 aaPredicted RBP23.63■■□□□ 1.37
DENND1A-202ENST00000373620 AQRO60306 1485 aaKnown RBP eCLIP23.62■■□□□ 1.377e-6■■□□□ 13.1
DENND1A-202ENST00000373620 CEP162Q5TB80 1403 aa23.62■■□□□ 1.37
DENND1A-202ENST00000373620 NEFLP07196 543 aa23.6■■□□□ 1.37
DENND1A-202ENST00000373620 APLP2Q06481 763 aa23.6■■□□□ 1.37
DENND1A-202ENST00000373620 KCNH8Q96L42 1107 aa23.59■■□□□ 1.37
DENND1A-202ENST00000373620 CUL7Q14999 1698 aa23.55■■□□□ 1.36
DENND1A-202ENST00000373620 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
DENND1A-202ENST00000373620 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
DENND1A-202ENST00000373620 GRIN2BQ13224 1484 aa23.48■■□□□ 1.35
DENND1A-202ENST00000373620 TRIM52Q96A61 297 aa23.46■■□□□ 1.35
DENND1A-202ENST00000373620 CLIP1P30622 1438 aa23.46■■□□□ 1.35
DENND1A-202ENST00000373620 IRX6P78412 446 aaPredicted RBP23.45■■□□□ 1.34
DENND1A-202ENST00000373620 RBM19Q9Y4C8 960 aaKnown RBP23.44■■□□□ 1.34
DENND1A-202ENST00000373620 PRKCSHP14314 528 aaPredicted RBP23.42■■□□□ 1.34
DENND1A-202ENST00000373620 ADAMTS12P58397 1594 aa23.4■■□□□ 1.34
DENND1A-202ENST00000373620 FHAD1B1AJZ9 1412 aa23.38■■□□□ 1.33
DENND1A-202ENST00000373620 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
DENND1A-202ENST00000373620 HIRIP3Q9BW71 556 aaPredicted RBP23.37■■□□□ 1.33
DENND1A-202ENST00000373620 NBR1Q14596 966 aa23.31■■□□□ 1.32
DENND1A-202ENST00000373620 CTTNBP2Q8WZ74 1663 aa23.3■■□□□ 1.32
DENND1A-202ENST00000373620 DDX10Q13206 875 aaKnown RBP23.28■■□□□ 1.32
DENND1A-202ENST00000373620 MAGI1Q96QZ7 1491 aaPredicted RBP23.27■■□□□ 1.32
DENND1A-202ENST00000373620 ARHGAP35Q9NRY4 1499 aa23.27■■□□□ 1.32
DENND1A-202ENST00000373620 ARAP1Q96P48 1450 aa23.26■■□□□ 1.31
DENND1A-202ENST00000373620 VPS8Q8N3P4 1428 aa23.22■■□□□ 1.31
DENND1A-202ENST00000373620 GRIN2AQ12879 1464 aa23.21■■□□□ 1.31
DENND1A-202ENST00000373620 SYNJ2O15056 1496 aa23.2■■□□□ 1.31
DENND1A-202ENST00000373620 RTN4Q9NQC3 1192 aaKnown RBP23.19■■□□□ 1.3
DENND1A-202ENST00000373620 FBLN2P98095 1184 aa23.19■■□□□ 1.3
DENND1A-202ENST00000373620 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
DENND1A-202ENST00000373620 CNGB1Q14028 1251 aaPredicted RBP23.16■■□□□ 1.3
DENND1A-202ENST00000373620 P3H3Q8IVL6 736 aa23.15■■□□□ 1.3
DENND1A-202ENST00000373620 CCDC136Q96JN2 1154 aa23.14■■□□□ 1.3
DENND1A-202ENST00000373620 ANO8Q9HCE9 1232 aaPredicted RBP23.12■■□□□ 1.29
DENND1A-202ENST00000373620 CLSPNQ9HAW4 1339 aa23.12■■□□□ 1.29
DENND1A-202ENST00000373620 MSH5O43196 834 aa23.12■■□□□ 1.29
DENND1A-202ENST00000373620 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
DENND1A-202ENST00000373620 EFCAB5A4FU69 1503 aa23.09■■□□□ 1.29
DENND1A-202ENST00000373620 FHOD3Q2V2M9 1422 aa23.09■■□□□ 1.29
DENND1A-202ENST00000373620 CEP170Q5SW79 1584 aa23.09■■□□□ 1.29
DENND1A-202ENST00000373620 CDK11AQ9UQ88 783 aaPredicted RBP23.07■■□□□ 1.28
DENND1A-202ENST00000373620 DEKP35659 375 aaKnown RBP23.07■■□□□ 1.28
DENND1A-202ENST00000373620 KIAA0586Q9BVV6 1533 aa23.06■■□□□ 1.28
DENND1A-202ENST00000373620 SAMD9Q5K651 1589 aa23.06■■□□□ 1.28
DENND1A-202ENST00000373620 NUP160Q12769 1436 aa23.03■■□□□ 1.28
DENND1A-202ENST00000373620 CHD1O14646 1710 aa23.02■■□□□ 1.28
DENND1A-202ENST00000373620 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.98■■□□□ 1.27
DENND1A-202ENST00000373620 UGGT2Q9NYU1 1516 aa22.98■■□□□ 1.27
DENND1A-202ENST00000373620 SENP3-EIF4A1A0A087X0R7 540 aa22.96■■□□□ 1.27
DENND1A-202ENST00000373620 PCF11O94913 1555 aaKnown RBP22.94■■□□□ 1.26
DENND1A-202ENST00000373620 DISP1Q96F81 1524 aa22.91■■□□□ 1.26
DENND1A-202ENST00000373620 FMN1Q68DA7 1419 aa22.9■■□□□ 1.26
DENND1A-202ENST00000373620 HNRNPUQ00839 825 aaKnown RBP eCLIP22.89■■□□□ 1.25
DENND1A-202ENST00000373620 KIAA0556O60303 1618 aa22.88■■□□□ 1.25
DENND1A-202ENST00000373620 JPH4Q96JJ6 628 aa22.88■■□□□ 1.25
DENND1A-202ENST00000373620 ATP1B4Q9UN42 357 aaPredicted RBP22.88■■□□□ 1.25
DENND1A-202ENST00000373620 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
DENND1A-202ENST00000373620 CASKIN1Q8WXD9 1431 aa22.86■■□□□ 1.25
DENND1A-202ENST00000373620 ANP32CO43423 234 aa22.86■■□□□ 1.25
DENND1A-202ENST00000373620 FYCO1Q9BQS8 1478 aa22.84■■□□□ 1.25
DENND1A-202ENST00000373620 EIF5BO60841 1220 aaKnown RBP22.83■■□□□ 1.25
DENND1A-202ENST00000373620 SALL2Q9Y467 1007 aaPredicted RBP22.83■■□□□ 1.25
DENND1A-202ENST00000373620 RTL5Q5HYW3 569 aaPredicted RBP22.83■■□□□ 1.24
DENND1A-202ENST00000373620 TIAM1Q13009 1591 aa22.81■■□□□ 1.24
DENND1A-202ENST00000373620 B4GALNT3Q6L9W6 998 aa22.78■■□□□ 1.24
DENND1A-202ENST00000373620 SIN3AQ96ST3 1273 aa22.78■■□□□ 1.24
DENND1A-202ENST00000373620 MAP3K1Q13233 1512 aa22.76■■□□□ 1.23
DENND1A-202ENST00000373620 CARMIL2Q6F5E8 1435 aa22.76■■□□□ 1.23
DENND1A-202ENST00000373620 NPM2Q86SE8 214 aaKnown RBP22.76■■□□□ 1.23
DENND1A-202ENST00000373620 CFAP43Q8NDM7 1665 aa22.75■■□□□ 1.23
DENND1A-202ENST00000373620 LRRIQ1Q96JM4 1722 aa22.75■■□□□ 1.23
DENND1A-202ENST00000373620 PRG4Q92954 1404 aaPredicted RBP22.75■■□□□ 1.23
DENND1A-202ENST00000373620 CLASP1Q7Z460 1538 aa22.73■■□□□ 1.23
DENND1A-202ENST00000373620 SHROOM2Q13796 1616 aa22.72■■□□□ 1.23
DENND1A-202ENST00000373620 LRRC9Q6ZRR7 1453 aa22.71■■□□□ 1.23
DENND1A-202ENST00000373620 HECW1Q76N89 1606 aa22.68■■□□□ 1.22
DENND1A-202ENST00000373620 ARID3CA6NKF2 412 aa22.67■■□□□ 1.22
DENND1A-202ENST00000373620 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
DENND1A-202ENST00000373620 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
DENND1A-202ENST00000373620 IL27Q8NEV9 243 aa22.66■■□□□ 1.22
DENND1A-202ENST00000373620 PLB1Q6P1J6 1458 aa22.65■■□□□ 1.22
DENND1A-202ENST00000373620 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
DENND1A-202ENST00000373620 EPRSP07814 1512 aaKnown RBP22.63■■□□□ 1.21
DENND1A-202ENST00000373620 CDK13Q14004 1512 aaKnown RBP22.63■■□□□ 1.21
DENND1A-202ENST00000373620 FAM9BQ8IZU0 186 aa22.62■■□□□ 1.21
DENND1A-202ENST00000373620 DHX57Q6P158 1386 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms