RNA–Protein interactions for RNA: ENST00000373600.7

NEK6-203, Transcript of NIMA related kinase 6, humanhuman

TSL 1 (best) BASIC

Gene NEK6, Length 3,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-203ENST00000373600 CFTRP13569 1480 aa16.84■□□□□ 0.29
NEK6-203ENST00000373600 CHIC2Q9UKJ5 165 aa16.84■□□□□ 0.29
NEK6-203ENST00000373600 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.29
NEK6-203ENST00000373600 FHOD3Q2V2M9 1422 aa16.81■□□□□ 0.28
NEK6-203ENST00000373600 FANCD2Q9BXW9 1451 aa16.81■□□□□ 0.28
NEK6-203ENST00000373600 FGD5Q6ZNL6 1462 aa16.81■□□□□ 0.28
NEK6-203ENST00000373600 RAD54L2Q9Y4B4 1467 aa16.81■□□□□ 0.28
NEK6-203ENST00000373600 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
NEK6-203ENST00000373600 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
NEK6-203ENST00000373600 ERCC6Q03468 1493 aa16.77■□□□□ 0.28
NEK6-203ENST00000373600 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.27
NEK6-203ENST00000373600 PHLDB1Q86UU1 1377 aa16.76■□□□□ 0.27
NEK6-203ENST00000373600 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
NEK6-203ENST00000373600 RRP7BPQ9NSQ0 103 aa16.74■□□□□ 0.27
NEK6-203ENST00000373600 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
NEK6-203ENST00000373600 MTUS2Q5JR59 1369 aa16.73■□□□□ 0.27
NEK6-203ENST00000373600 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
NEK6-203ENST00000373600 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
NEK6-203ENST00000373600 RRBP1Q9P2E9 1410 aaKnown RBP16.7■□□□□ 0.26
NEK6-203ENST00000373600 POLR3GLQ9BT43 218 aa16.66■□□□□ 0.26
NEK6-203ENST00000373600 SUPT16HQ9Y5B9 1047 aaKnown RBP16.66■□□□□ 0.26
NEK6-203ENST00000373600 TONSLQ96HA7 1378 aa16.65■□□□□ 0.26
NEK6-203ENST00000373600 ANP32CO43423 234 aa16.64■□□□□ 0.25
NEK6-203ENST00000373600 FKBP8Q14318 412 aa16.64■□□□□ 0.25
NEK6-203ENST00000373600 FHAD1B1AJZ9 1412 aa16.64■□□□□ 0.25
NEK6-203ENST00000373600 LRRC9Q6ZRR7 1453 aa16.62■□□□□ 0.25
NEK6-203ENST00000373600 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
NEK6-203ENST00000373600 FOXD1Q16676 465 aa16.61■□□□□ 0.25
NEK6-203ENST00000373600 NEFLP07196 543 aa16.6■□□□□ 0.25
NEK6-203ENST00000373600 ZNF326Q5BKZ1 582 aaKnown RBP16.57■□□□□ 0.24
NEK6-203ENST00000373600 SENP3-EIF4A1A0A087X0R7 540 aa16.55■□□□□ 0.24
NEK6-203ENST00000373600 ZNF777Q9ULD5 760 aaPredicted RBP16.55■□□□□ 0.24
NEK6-203ENST00000373600 TIAM1Q13009 1591 aa16.55■□□□□ 0.24
NEK6-203ENST00000373600 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
NEK6-203ENST00000373600 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
NEK6-203ENST00000373600 POLA1P09884 1462 aaPredicted RBP16.54■□□□□ 0.24
NEK6-203ENST00000373600 AQRO60306 1485 aaKnown RBP eCLIP16.53■□□□□ 0.242e-7■□□□□ 10.1
NEK6-203ENST00000373600 WDR97A6NE52 1622 aa16.5■□□□□ 0.23
NEK6-203ENST00000373600 TOPBP1Q92547 1522 aa16.5■□□□□ 0.23
NEK6-203ENST00000373600 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
NEK6-203ENST00000373600 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
NEK6-203ENST00000373600 MAPKBP1O60336 1514 aa16.47■□□□□ 0.23
NEK6-203ENST00000373600 FMN1Q68DA7 1419 aa16.44■□□□□ 0.22
NEK6-203ENST00000373600 FGD6Q6ZV73 1430 aa16.43■□□□□ 0.22
NEK6-203ENST00000373600 URB2Q14146 1524 aaKnown RBP16.43■□□□□ 0.22
NEK6-203ENST00000373600 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
NEK6-203ENST00000373600 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
NEK6-203ENST00000373600 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
NEK6-203ENST00000373600 CCDC18Q5T9S5 1454 aa16.4■□□□□ 0.22
NEK6-203ENST00000373600 HSPA5P11021 654 aaKnown RBP16.38■□□□□ 0.21
NEK6-203ENST00000373600 ZNF644Q9H582 1327 aaPredicted RBP16.38■□□□□ 0.21
NEK6-203ENST00000373600 PTPRKQ15262 1439 aa16.38■□□□□ 0.21
NEK6-203ENST00000373600 ABCA10Q8WWZ4 1543 aa16.37■□□□□ 0.21
NEK6-203ENST00000373600 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
NEK6-203ENST00000373600 DNMBPQ6XZF7 1577 aa16.36■□□□□ 0.21
NEK6-203ENST00000373600 TSHZ2Q9NRE2 1034 aa16.36■□□□□ 0.21
NEK6-203ENST00000373600 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
NEK6-203ENST00000373600 FYCO1Q9BQS8 1478 aa16.34■□□□□ 0.21
NEK6-203ENST00000373600 NCOA2Q15596 1464 aa16.34■□□□□ 0.21
NEK6-203ENST00000373600 L3MBTL2Q969R5 705 aa16.34■□□□□ 0.21
NEK6-203ENST00000373600 MPHOSPH9Q99550 1183 aa16.34■□□□□ 0.21
NEK6-203ENST00000373600 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.218e-7■■■■■ 28.7
NEK6-203ENST00000373600 TIMELESSQ9UNS1 1208 aa16.31■□□□□ 0.2
NEK6-203ENST00000373600 ZNF608Q9ULD9 1512 aaPredicted RBP16.31■□□□□ 0.2
NEK6-203ENST00000373600 KDM2AQ9Y2K7 1162 aa16.3■□□□□ 0.2
NEK6-203ENST00000373600 MYOM3Q5VTT5 1437 aa16.3■□□□□ 0.2
NEK6-203ENST00000373600 MRC2Q9UBG0 1479 aa16.29■□□□□ 0.2
NEK6-203ENST00000373600 MRS2Q9HD23 443 aa16.28■□□□□ 0.2
NEK6-203ENST00000373600 CFDP1Q9UEE9 299 aaPredicted RBP16.27■□□□□ 0.2
NEK6-203ENST00000373600 MAP3K1Q13233 1512 aa16.27■□□□□ 0.2
NEK6-203ENST00000373600 NAIPQ13075 1403 aa16.26■□□□□ 0.19
NEK6-203ENST00000373600 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
NEK6-203ENST00000373600 CCDC184Q52MB2 194 aa16.26■□□□□ 0.19
NEK6-203ENST00000373600 KIF21AQ7Z4S6 1674 aa16.26■□□□□ 0.19
NEK6-203ENST00000373600 UACAQ9BZF9 1416 aa16.25■□□□□ 0.19
NEK6-203ENST00000373600 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
NEK6-203ENST00000373600 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
NEK6-203ENST00000373600 WASHC2AQ641Q2 1341 aa16.24■□□□□ 0.19
NEK6-203ENST00000373600 EFCAB5A4FU69 1503 aa16.23■□□□□ 0.19
NEK6-203ENST00000373600 HFM1A2PYH4 1435 aa16.22■□□□□ 0.19
NEK6-203ENST00000373600 MYT1LQ9UL68 1186 aa16.22■□□□□ 0.19
NEK6-203ENST00000373600 SALL2Q9Y467 1007 aaPredicted RBP16.22■□□□□ 0.19
NEK6-203ENST00000373600 C11orf95C9JLR9 678 aaPredicted RBP16.21■□□□□ 0.19
NEK6-203ENST00000373600 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
NEK6-203ENST00000373600 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
NEK6-203ENST00000373600 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
NEK6-203ENST00000373600 NBPF8Q3BBV2 869 aa16.18■□□□□ 0.18
NEK6-203ENST00000373600 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.18■□□□□ 0.182e-8■□□□□ 10.5
NEK6-203ENST00000373600 CFAP43Q8NDM7 1665 aa16.17■□□□□ 0.18
NEK6-203ENST00000373600 PKD2Q13563 968 aa16.15■□□□□ 0.18
NEK6-203ENST00000373600 CUL7Q14999 1698 aa16.15■□□□□ 0.18
NEK6-203ENST00000373600 RGL3Q3MIN7 710 aa16.14■□□□□ 0.17
NEK6-203ENST00000373600 PTPN23Q9H3S7 1636 aa16.13■□□□□ 0.17
NEK6-203ENST00000373600 RBM19Q9Y4C8 960 aaKnown RBP16.13■□□□□ 0.17
NEK6-203ENST00000373600 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
NEK6-203ENST00000373600 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
NEK6-203ENST00000373600 B4GALNT3Q6L9W6 998 aa16.12■□□□□ 0.17
NEK6-203ENST00000373600 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.11■□□□□ 0.171e-7■■■■■ 59.4
NEK6-203ENST00000373600 MYT1Q01538 1121 aa16.11■□□□□ 0.17
NEK6-203ENST00000373600 PLEKHD1A6NEE1 506 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms