RNA–Protein interactions for RNA: ENST00000372930.4

TMEM35A-201, Transcript of transmembrane protein 35A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM35A, Length 2,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35A-201ENST00000372930 CHMP4AQ9BY43 222 aa13.52□□□□□ -0.25
TMEM35A-201ENST00000372930 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
TMEM35A-201ENST00000372930 RUSC2Q8N2Y8 1516 aa13.52□□□□□ -0.25
TMEM35A-201ENST00000372930 PRDM2Q13029 1718 aa13.51□□□□□ -0.25
TMEM35A-201ENST00000372930 GLIPR1L2Q4G1C9 344 aa13.51□□□□□ -0.25
TMEM35A-201ENST00000372930 LAMC3Q9Y6N6 1575 aa13.5□□□□□ -0.25
TMEM35A-201ENST00000372930 NPM2Q86SE8 214 aaKnown RBP13.5□□□□□ -0.25
TMEM35A-201ENST00000372930 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
TMEM35A-201ENST00000372930 BIVM-ERCC5R4GMW8 1640 aa13.47□□□□□ -0.25
TMEM35A-201ENST00000372930 DHX37Q8IY37 1157 aaKnown RBP13.47□□□□□ -0.25
TMEM35A-201ENST00000372930 PDS5BQ9NTI5 1447 aa13.46□□□□□ -0.25
TMEM35A-201ENST00000372930 BRD2P25440 801 aaKnown RBP13.45□□□□□ -0.26
TMEM35A-201ENST00000372930 SUPT16HQ9Y5B9 1047 aaKnown RBP13.45□□□□□ -0.26
TMEM35A-201ENST00000372930 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
TMEM35A-201ENST00000372930 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
TMEM35A-201ENST00000372930 AMER1Q5JTC6 1135 aaPredicted RBP13.44□□□□□ -0.26
TMEM35A-201ENST00000372930 EEA1Q15075 1411 aa13.43□□□□□ -0.26
TMEM35A-201ENST00000372930 DIEXFQ68CQ4 756 aaKnown RBP13.42□□□□□ -0.26
TMEM35A-201ENST00000372930 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
TMEM35A-201ENST00000372930 RSPH4AQ5TD94 716 aa13.39□□□□□ -0.27
TMEM35A-201ENST00000372930 FGD5Q6ZNL6 1462 aa13.39□□□□□ -0.27
TMEM35A-201ENST00000372930 MSH5O43196 834 aa13.38□□□□□ -0.27
TMEM35A-201ENST00000372930 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
TMEM35A-201ENST00000372930 VSIG10Q8N0Z9 540 aa13.38□□□□□ -0.27
TMEM35A-201ENST00000372930 URB2Q14146 1524 aaKnown RBP13.37□□□□□ -0.27
TMEM35A-201ENST00000372930 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
TMEM35A-201ENST00000372930 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
TMEM35A-201ENST00000372930 PAXIP1Q6ZW49 1069 aaPredicted RBP13.37□□□□□ -0.27
TMEM35A-201ENST00000372930 KIF21AQ7Z4S6 1674 aa13.36□□□□□ -0.27
TMEM35A-201ENST00000372930 IL27Q8NEV9 243 aa13.35□□□□□ -0.27
TMEM35A-201ENST00000372930 UBTFP17480 764 aaKnown RBP13.34□□□□□ -0.27
TMEM35A-201ENST00000372930 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
TMEM35A-201ENST00000372930 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
TMEM35A-201ENST00000372930 RAD54L2Q9Y4B4 1467 aa13.33□□□□□ -0.28
TMEM35A-201ENST00000372930 CUX2O14529 1486 aa13.33□□□□□ -0.28
TMEM35A-201ENST00000372930 POLA1P09884 1462 aaPredicted RBP13.33□□□□□ -0.28
TMEM35A-201ENST00000372930 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
TMEM35A-201ENST00000372930 RBM19Q9Y4C8 960 aaKnown RBP13.32□□□□□ -0.28
TMEM35A-201ENST00000372930 ERCC6Q03468 1493 aa13.29□□□□□ -0.28
TMEM35A-201ENST00000372930 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
TMEM35A-201ENST00000372930 MRC2Q9UBG0 1479 aa13.27□□□□□ -0.28
TMEM35A-201ENST00000372930 RAPGEF2Q9Y4G8 1499 aa13.27□□□□□ -0.29
TMEM35A-201ENST00000372930 ZNF326Q5BKZ1 582 aaKnown RBP13.27□□□□□ -0.29
TMEM35A-201ENST00000372930 YTHDC1Q96MU7 727 aaKnown RBP13.25□□□□□ -0.29
TMEM35A-201ENST00000372930 TNIKQ9UKE5 1360 aa13.25□□□□□ -0.29
TMEM35A-201ENST00000372930 IGF1RP08069 1367 aa13.25□□□□□ -0.29
TMEM35A-201ENST00000372930 KIF21BO75037 1637 aa13.24□□□□□ -0.29
TMEM35A-201ENST00000372930 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
TMEM35A-201ENST00000372930 NAP1L5Q96NT1 182 aaPredicted RBP13.23□□□□□ -0.29
TMEM35A-201ENST00000372930 TDRD9Q8NDG6 1382 aaKnown RBP13.23□□□□□ -0.29
TMEM35A-201ENST00000372930 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
TMEM35A-201ENST00000372930 CNKSR2Q8WXI2 1034 aa13.21□□□□□ -0.29
TMEM35A-201ENST00000372930 CEP162Q5TB80 1403 aa13.21□□□□□ -0.3
TMEM35A-201ENST00000372930 FANCIQ9NVI1 1328 aa13.2□□□□□ -0.3
TMEM35A-201ENST00000372930 CARMIL1Q5VZK9 1371 aa13.18□□□□□ -0.3
TMEM35A-201ENST00000372930 WDR62O43379 1518 aa13.17□□□□□ -0.3
TMEM35A-201ENST00000372930 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
TMEM35A-201ENST00000372930 NAP1L2Q9ULW6 460 aaPredicted RBP13.16□□□□□ -0.3
TMEM35A-201ENST00000372930 ERICH3Q5RHP9 1530 aa13.16□□□□□ -0.3
TMEM35A-201ENST00000372930 TARBP1Q13395 1621 aaKnown RBP13.15□□□□□ -0.31
TMEM35A-201ENST00000372930 GAPVD1Q14C86 1478 aa13.14□□□□□ -0.31
TMEM35A-201ENST00000372930 WDR97A6NE52 1622 aa13.13□□□□□ -0.31
TMEM35A-201ENST00000372930 THOC2Q8NI27 1593 aaKnown RBP13.13□□□□□ -0.31
TMEM35A-201ENST00000372930 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.31
TMEM35A-201ENST00000372930 KCNA4P22459 653 aa13.13□□□□□ -0.31
TMEM35A-201ENST00000372930 CLIP1P30622 1438 aa13.11□□□□□ -0.31
TMEM35A-201ENST00000372930 IFT140Q96RY7 1462 aa13.1□□□□□ -0.31
TMEM35A-201ENST00000372930 TPRNQ4KMQ1 711 aa13.1□□□□□ -0.31
TMEM35A-201ENST00000372930 ZNF608Q9ULD9 1512 aaPredicted RBP13.1□□□□□ -0.31
TMEM35A-201ENST00000372930 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
TMEM35A-201ENST00000372930 BCCIPQ9P287 314 aaKnown RBP eCLIP13.05□□□□□ -0.32
TMEM35A-201ENST00000372930 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
TMEM35A-201ENST00000372930 IPO4Q8TEX9 1081 aaKnown RBP13.04□□□□□ -0.32
TMEM35A-201ENST00000372930 CUL7Q14999 1698 aa13.03□□□□□ -0.32
TMEM35A-201ENST00000372930 HSP90B1P14625 803 aaKnown RBP13.03□□□□□ -0.32
TMEM35A-201ENST00000372930 CDK11BP21127 795 aaKnown RBP13.03□□□□□ -0.32
TMEM35A-201ENST00000372930 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
TMEM35A-201ENST00000372930 C11orf95C9JLR9 678 aaPredicted RBP13.02□□□□□ -0.33
TMEM35A-201ENST00000372930 GRIN2BQ13224 1484 aa13.02□□□□□ -0.33
TMEM35A-201ENST00000372930 IRX6P78412 446 aaPredicted RBP13.01□□□□□ -0.33
TMEM35A-201ENST00000372930 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.01□□□□□ -0.33
TMEM35A-201ENST00000372930 PBRM1Q86U86 1689 aa12.98□□□□□ -0.33
TMEM35A-201ENST00000372930 BBXQ8WY36 941 aaPredicted RBP12.98□□□□□ -0.33
TMEM35A-201ENST00000372930 ZFP91Q96JP5 570 aaPredicted RBP12.98□□□□□ -0.33
TMEM35A-201ENST00000372930 EIF4G3O43432 1585 aaKnown RBP12.98□□□□□ -0.33
TMEM35A-201ENST00000372930 FHAD1B1AJZ9 1412 aa12.98□□□□□ -0.33
TMEM35A-201ENST00000372930 P3H3Q8IVL6 736 aa12.97□□□□□ -0.33
TMEM35A-201ENST00000372930 VPS8Q8N3P4 1428 aa12.97□□□□□ -0.33
TMEM35A-201ENST00000372930 SNAPC4Q5SXM2 1469 aa12.96□□□□□ -0.33
TMEM35A-201ENST00000372930 ARAP1Q96P48 1450 aa12.96□□□□□ -0.33
TMEM35A-201ENST00000372930 ARHGAP35Q9NRY4 1499 aa12.96□□□□□ -0.33
TMEM35A-201ENST00000372930 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.34
TMEM35A-201ENST00000372930 ADAMTS12P58397 1594 aa12.95□□□□□ -0.34
TMEM35A-201ENST00000372930 FBLN2P98095 1184 aa12.94□□□□□ -0.34
TMEM35A-201ENST00000372930 CHRM1P11229 460 aaPredicted RBP12.93□□□□□ -0.34
TMEM35A-201ENST00000372930 TEX2Q8IWB9 1127 aa12.93□□□□□ -0.34
TMEM35A-201ENST00000372930 CHMP7Q8WUX9 453 aaPredicted RBP12.92□□□□□ -0.34
TMEM35A-201ENST00000372930 MIER1Q8N108 512 aa12.91□□□□□ -0.34
TMEM35A-201ENST00000372930 RRP9O43818 475 aaKnown RBP12.9□□□□□ -0.34
TMEM35A-201ENST00000372930 BCANQ96GW7 911 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms