RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.18
PABPC4-202ENST00000372857 HMGXB3Q12766 1538 aa22.45■■□□□ 1.18
PABPC4-202ENST00000372857 MAPKBP1O60336 1514 aa22.44■■□□□ 1.18
PABPC4-202ENST00000372857 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
PABPC4-202ENST00000372857 SIN3AQ96ST3 1273 aa22.42■■□□□ 1.18
PABPC4-202ENST00000372857 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
PABPC4-202ENST00000372857 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
PABPC4-202ENST00000372857 PPP1R15AO75807 674 aaPredicted RBP22.36■■□□□ 1.17
PABPC4-202ENST00000372857 CADPSQ9ULU8 1353 aa22.36■■□□□ 1.17
PABPC4-202ENST00000372857 IGF1RP08069 1367 aa22.34■■□□□ 1.17
PABPC4-202ENST00000372857 MSH5O43196 834 aa22.34■■□□□ 1.17
PABPC4-202ENST00000372857 DNAJC5BQ9UF47 199 aa22.33■■□□□ 1.17
PABPC4-202ENST00000372857 ARHGAP35Q9NRY4 1499 aa22.31■■□□□ 1.16
PABPC4-202ENST00000372857 ANP32CO43423 234 aa22.3■■□□□ 1.16
PABPC4-202ENST00000372857 FGD5Q6ZNL6 1462 aa22.29■■□□□ 1.16
PABPC4-202ENST00000372857 CARMIL1Q5VZK9 1371 aa22.29■■□□□ 1.16
PABPC4-202ENST00000372857 SETD5Q9C0A6 1442 aa22.28■■□□□ 1.16
PABPC4-202ENST00000372857 FAM50AQ14320 339 aaKnown RBP22.27■■□□□ 1.16
PABPC4-202ENST00000372857 NESP48681 1621 aa22.26■■□□□ 1.15
PABPC4-202ENST00000372857 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
PABPC4-202ENST00000372857 CCER2I3L3R5 266 aa22.24■■□□□ 1.15
PABPC4-202ENST00000372857 IRX6P78412 446 aaPredicted RBP22.23■■□□□ 1.15
PABPC4-202ENST00000372857 CC2D2AQ9P2K1 1620 aa22.23■■□□□ 1.15
PABPC4-202ENST00000372857 FANCD2Q9BXW9 1451 aa22.17■■□□□ 1.14
PABPC4-202ENST00000372857 ERICH6Q7L0X2 663 aa22.15■■□□□ 1.14
PABPC4-202ENST00000372857 PHLDB1Q86UU1 1377 aa22.15■■□□□ 1.14
PABPC4-202ENST00000372857 TIAM1Q13009 1591 aa22.13■■□□□ 1.13
PABPC4-202ENST00000372857 CDK11AQ9UQ88 783 aaPredicted RBP22.11■■□□□ 1.13
PABPC4-202ENST00000372857 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.13
PABPC4-202ENST00000372857 FHOD3Q2V2M9 1422 aa22.11■■□□□ 1.13
PABPC4-202ENST00000372857 FANCIQ9NVI1 1328 aa22.09■■□□□ 1.13
PABPC4-202ENST00000372857 TDRD9Q8NDG6 1382 aaKnown RBP22.08■■□□□ 1.12
PABPC4-202ENST00000372857 LRRC9Q6ZRR7 1453 aa22.08■■□□□ 1.12
PABPC4-202ENST00000372857 ARID3CA6NKF2 412 aa22.07■■□□□ 1.12
PABPC4-202ENST00000372857 TIMELESSQ9UNS1 1208 aa22.07■■□□□ 1.12
PABPC4-202ENST00000372857 TONSLQ96HA7 1378 aa22.01■■□□□ 1.11
PABPC4-202ENST00000372857 POLA1P09884 1462 aaPredicted RBP22■■□□□ 1.11
PABPC4-202ENST00000372857 MAP3K1Q13233 1512 aa21.98■■□□□ 1.11
PABPC4-202ENST00000372857 TOPBP1Q92547 1522 aa21.96■■□□□ 1.11
PABPC4-202ENST00000372857 PCF11O94913 1555 aaKnown RBP21.88■■□□□ 1.09
PABPC4-202ENST00000372857 PRDM2Q13029 1718 aa21.88■■□□□ 1.09
PABPC4-202ENST00000372857 PPP4R2Q9NY27 417 aa21.87■■□□□ 1.09
PABPC4-202ENST00000372857 DEKP35659 375 aaKnown RBP21.87■■□□□ 1.09
PABPC4-202ENST00000372857 B4GALNT3Q6L9W6 998 aa21.87■■□□□ 1.09
PABPC4-202ENST00000372857 FHAD1B1AJZ9 1412 aa21.85■■□□□ 1.09
PABPC4-202ENST00000372857 CCDC184Q52MB2 194 aa21.85■■□□□ 1.09
PABPC4-202ENST00000372857 CFAP43Q8NDM7 1665 aa21.85■■□□□ 1.09
PABPC4-202ENST00000372857 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
PABPC4-202ENST00000372857 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
PABPC4-202ENST00000372857 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
PABPC4-202ENST00000372857 CCDC18Q5T9S5 1454 aa21.82■■□□□ 1.08
PABPC4-202ENST00000372857 CHIC2Q9UKJ5 165 aa21.81■■□□□ 1.08
PABPC4-202ENST00000372857 WASHC2AQ641Q2 1341 aa21.8■■□□□ 1.08
PABPC4-202ENST00000372857 MTUS2Q5JR59 1369 aa21.79■■□□□ 1.08
PABPC4-202ENST00000372857 NBR1Q14596 966 aa21.79■■□□□ 1.08
PABPC4-202ENST00000372857 FAM9BQ8IZU0 186 aa21.79■■□□□ 1.08
PABPC4-202ENST00000372857 HSPA5P11021 654 aaKnown RBP21.78■■□□□ 1.08
PABPC4-202ENST00000372857 ERICH6BQ5W0A0 696 aa21.77■■□□□ 1.07
PABPC4-202ENST00000372857 UACAQ9BZF9 1416 aa21.74■■□□□ 1.07
PABPC4-202ENST00000372857 MYT1LQ9UL68 1186 aa21.74■■□□□ 1.07
PABPC4-202ENST00000372857 PTPRKQ15262 1439 aa21.74■■□□□ 1.07
PABPC4-202ENST00000372857 FGD6Q6ZV73 1430 aa21.73■■□□□ 1.07
PABPC4-202ENST00000372857 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
PABPC4-202ENST00000372857 PAK3O75914 559 aaPredicted RBP21.72■■□□□ 1.07
PABPC4-202ENST00000372857 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
PABPC4-202ENST00000372857 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.71■■□□□ 1.07
PABPC4-202ENST00000372857 NOP58Q9Y2X3 529 aaKnown RBP21.71■■□□□ 1.07
PABPC4-202ENST00000372857 AQRO60306 1485 aaKnown RBP eCLIP21.7■■□□□ 1.065e-7■■■■■ 31
PABPC4-202ENST00000372857 KDM5BQ9UGL1 1544 aa21.7■■□□□ 1.06
PABPC4-202ENST00000372857 MRS2Q9HD23 443 aa21.69■■□□□ 1.06
PABPC4-202ENST00000372857 HFM1A2PYH4 1435 aa21.68■■□□□ 1.06
PABPC4-202ENST00000372857 CASKIN1Q8WXD9 1431 aa21.68■■□□□ 1.06
PABPC4-202ENST00000372857 PTPN23Q9H3S7 1636 aa21.68■■□□□ 1.06
PABPC4-202ENST00000372857 FYCO1Q9BQS8 1478 aa21.67■■□□□ 1.06
PABPC4-202ENST00000372857 EIF4G2P78344 907 aaKnown RBP eCLIP21.65■■□□□ 1.06
PABPC4-202ENST00000372857 PDS5BQ9NTI5 1447 aa21.65■■□□□ 1.06
PABPC4-202ENST00000372857 NAIPQ13075 1403 aa21.64■■□□□ 1.05
PABPC4-202ENST00000372857 CNTLNQ9NXG0 1405 aa21.64■■□□□ 1.05
PABPC4-202ENST00000372857 PRKRIP1Q9H875 184 aaPredicted RBP21.64■■□□□ 1.05
PABPC4-202ENST00000372857 C11orf95C9JLR9 678 aaPredicted RBP21.63■■□□□ 1.05
PABPC4-202ENST00000372857 FMN1Q68DA7 1419 aa21.62■■□□□ 1.05
PABPC4-202ENST00000372857 ZBED9Q6R2W3 1325 aa21.61■■□□□ 1.05
PABPC4-202ENST00000372857 FOXD1Q16676 465 aa21.59■■□□□ 1.05
PABPC4-202ENST00000372857 CNGB1Q14028 1251 aaPredicted RBP21.59■■□□□ 1.05
PABPC4-202ENST00000372857 NCOA2Q15596 1464 aa21.58■■□□□ 1.05
PABPC4-202ENST00000372857 FBLN2P98095 1184 aa21.57■■□□□ 1.04
PABPC4-202ENST00000372857 SNAPC4Q5SXM2 1469 aa21.57■■□□□ 1.04
PABPC4-202ENST00000372857 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
PABPC4-202ENST00000372857 ANO8Q9HCE9 1232 aaPredicted RBP21.55■■□□□ 1.04
PABPC4-202ENST00000372857 EFCAB5A4FU69 1503 aa21.55■■□□□ 1.04
PABPC4-202ENST00000372857 SENP3-EIF4A1A0A087X0R7 540 aa21.55■■□□□ 1.04
PABPC4-202ENST00000372857 KIF21AQ7Z4S6 1674 aa21.54■■□□□ 1.04
PABPC4-202ENST00000372857 CUL7Q14999 1698 aa21.54■■□□□ 1.04
PABPC4-202ENST00000372857 AKNAQ7Z591 1439 aa21.54■■□□□ 1.04
PABPC4-202ENST00000372857 CCDC7Q96M83 1385 aa21.54■■□□□ 1.04
PABPC4-202ENST00000372857 CTTNBP2Q8WZ74 1663 aa21.52■■□□□ 1.04
PABPC4-202ENST00000372857 L3MBTL2Q969R5 705 aa21.52■■□□□ 1.04
PABPC4-202ENST00000372857 ANP32AP39687 249 aaKnown RBP21.5■■□□□ 1.03
PABPC4-202ENST00000372857 CCDC136Q96JN2 1154 aa21.5■■□□□ 1.03
PABPC4-202ENST00000372857 MYOM3Q5VTT5 1437 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms