RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 ATP1B4Q9UN42 357 aaPredicted RBP22.68■■□□□ 1.22
PABPC4-201ENST00000372856 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
PABPC4-201ENST00000372856 MAPKBP1O60336 1514 aa22.65■■□□□ 1.22
PABPC4-201ENST00000372856 SIN3AQ96ST3 1273 aa22.64■■□□□ 1.22
PABPC4-201ENST00000372856 PHLDB1Q86UU1 1377 aa22.64■■□□□ 1.21
PABPC4-201ENST00000372856 SETD5Q9C0A6 1442 aa22.63■■□□□ 1.21
PABPC4-201ENST00000372856 BCANQ96GW7 911 aa22.61■■□□□ 1.21
PABPC4-201ENST00000372856 LRRC9Q6ZRR7 1453 aa22.61■■□□□ 1.21
PABPC4-201ENST00000372856 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
PABPC4-201ENST00000372856 CADPSQ9ULU8 1353 aa22.6■■□□□ 1.21
PABPC4-201ENST00000372856 DDX10Q13206 875 aaKnown RBP22.57■■□□□ 1.2
PABPC4-201ENST00000372856 MAP3K1Q13233 1512 aa22.56■■□□□ 1.2
PABPC4-201ENST00000372856 ERICH6Q7L0X2 663 aa22.55■■□□□ 1.2
PABPC4-201ENST00000372856 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
PABPC4-201ENST00000372856 HIRIP3Q9BW71 556 aaPredicted RBP22.5■■□□□ 1.19
PABPC4-201ENST00000372856 WDR97A6NE52 1622 aa22.5■■□□□ 1.19
PABPC4-201ENST00000372856 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
PABPC4-201ENST00000372856 PRDM2Q13029 1718 aa22.46■■□□□ 1.19
PABPC4-201ENST00000372856 PCF11O94913 1555 aaKnown RBP22.45■■□□□ 1.19
PABPC4-201ENST00000372856 RAD54L2Q9Y4B4 1467 aa22.41■■□□□ 1.18
PABPC4-201ENST00000372856 PPP1R15AO75807 674 aaPredicted RBP22.39■■□□□ 1.18
PABPC4-201ENST00000372856 RBM19Q9Y4C8 960 aaKnown RBP22.39■■□□□ 1.17
PABPC4-201ENST00000372856 FANCD2Q9BXW9 1451 aa22.38■■□□□ 1.17
PABPC4-201ENST00000372856 CFAP43Q8NDM7 1665 aa22.37■■□□□ 1.17
PABPC4-201ENST00000372856 TIMELESSQ9UNS1 1208 aa22.35■■□□□ 1.17
PABPC4-201ENST00000372856 FKBP8Q14318 412 aa22.34■■□□□ 1.17
PABPC4-201ENST00000372856 ANO8Q9HCE9 1232 aaPredicted RBP22.34■■□□□ 1.17
PABPC4-201ENST00000372856 CASKIN1Q8WXD9 1431 aa22.32■■□□□ 1.16
PABPC4-201ENST00000372856 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
PABPC4-201ENST00000372856 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
PABPC4-201ENST00000372856 ANP32CO43423 234 aa22.28■■□□□ 1.16
PABPC4-201ENST00000372856 POLA1P09884 1462 aaPredicted RBP22.28■■□□□ 1.16
PABPC4-201ENST00000372856 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
PABPC4-201ENST00000372856 TONSLQ96HA7 1378 aa22.26■■□□□ 1.15
PABPC4-201ENST00000372856 FGD6Q6ZV73 1430 aa22.26■■□□□ 1.15
PABPC4-201ENST00000372856 MSH5O43196 834 aa22.25■■□□□ 1.15
PABPC4-201ENST00000372856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.25■■□□□ 1.15
PABPC4-201ENST00000372856 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
PABPC4-201ENST00000372856 EFCAB5A4FU69 1503 aa22.24■■□□□ 1.15
PABPC4-201ENST00000372856 TOPBP1Q92547 1522 aa22.24■■□□□ 1.15
PABPC4-201ENST00000372856 DNMBPQ6XZF7 1577 aa22.23■■□□□ 1.15
PABPC4-201ENST00000372856 CC2D2AQ9P2K1 1620 aa22.23■■□□□ 1.15
PABPC4-201ENST00000372856 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.155e-7■■■■■ 31
PABPC4-201ENST00000372856 NESP48681 1621 aa22.21■■□□□ 1.15
PABPC4-201ENST00000372856 CCER2I3L3R5 266 aa22.21■■□□□ 1.15
PABPC4-201ENST00000372856 PTPRKQ15262 1439 aa22.21■■□□□ 1.15
PABPC4-201ENST00000372856 FMN1Q68DA7 1419 aa22.21■■□□□ 1.15
PABPC4-201ENST00000372856 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
PABPC4-201ENST00000372856 NEFLP07196 543 aa22.18■■□□□ 1.14
PABPC4-201ENST00000372856 SNAPC4Q5SXM2 1469 aa22.16■■□□□ 1.14
PABPC4-201ENST00000372856 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
PABPC4-201ENST00000372856 HFM1A2PYH4 1435 aa22.14■■□□□ 1.13
PABPC4-201ENST00000372856 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
PABPC4-201ENST00000372856 CUL7Q14999 1698 aa22.12■■□□□ 1.13
PABPC4-201ENST00000372856 CTTNBP2Q8WZ74 1663 aa22.11■■□□□ 1.13
PABPC4-201ENST00000372856 NAIPQ13075 1403 aa22.1■■□□□ 1.13
PABPC4-201ENST00000372856 NCOA2Q15596 1464 aa22.1■■□□□ 1.13
PABPC4-201ENST00000372856 DEKP35659 375 aaKnown RBP22.08■■□□□ 1.13
PABPC4-201ENST00000372856 RRP7BPQ9NSQ0 103 aa22.08■■□□□ 1.13
PABPC4-201ENST00000372856 CHIC2Q9UKJ5 165 aa22.08■■□□□ 1.13
PABPC4-201ENST00000372856 PTPN23Q9H3S7 1636 aa22.08■■□□□ 1.13
PABPC4-201ENST00000372856 MYOM3Q5VTT5 1437 aa22.08■■□□□ 1.12
PABPC4-201ENST00000372856 CCDC136Q96JN2 1154 aa22.06■■□□□ 1.12
PABPC4-201ENST00000372856 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
PABPC4-201ENST00000372856 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
PABPC4-201ENST00000372856 GRIN2BQ13224 1484 aa22.01■■□□□ 1.11
PABPC4-201ENST00000372856 HNRNPUQ00839 825 aaKnown RBP eCLIP22■■□□□ 1.11
PABPC4-201ENST00000372856 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
PABPC4-201ENST00000372856 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
PABPC4-201ENST00000372856 LRRIQ1Q96JM4 1722 aa21.99■■□□□ 1.11
PABPC4-201ENST00000372856 HSPA5P11021 654 aaKnown RBP21.98■■□□□ 1.11
PABPC4-201ENST00000372856 ARID3CA6NKF2 412 aa21.96■■□□□ 1.11
PABPC4-201ENST00000372856 KDM5BQ9UGL1 1544 aa21.96■■□□□ 1.11
PABPC4-201ENST00000372856 WASHC2AQ641Q2 1341 aa21.95■■□□□ 1.1
PABPC4-201ENST00000372856 SUPT6HQ7KZ85 1726 aaKnown RBP21.94■■□□□ 1.1
PABPC4-201ENST00000372856 EHBP1L1Q8N3D4 1523 aa21.94■■□□□ 1.1
PABPC4-201ENST00000372856 IRX6P78412 446 aaPredicted RBP21.93■■□□□ 1.1
PABPC4-201ENST00000372856 MAGI3Q5TCQ9 1506 aa21.93■■□□□ 1.1
PABPC4-201ENST00000372856 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
PABPC4-201ENST00000372856 FOXD1Q16676 465 aa21.91■■□□□ 1.1
PABPC4-201ENST00000372856 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
PABPC4-201ENST00000372856 EIF4G2P78344 907 aaKnown RBP eCLIP21.88■■□□□ 1.09
PABPC4-201ENST00000372856 DENND4BO75064 1496 aaPredicted RBP21.87■■□□□ 1.09
PABPC4-201ENST00000372856 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
PABPC4-201ENST00000372856 MPHOSPH9Q99550 1183 aa21.87■■□□□ 1.09
PABPC4-201ENST00000372856 DNAJC5BQ9UF47 199 aa21.87■■□□□ 1.09
PABPC4-201ENST00000372856 L3MBTL2Q969R5 705 aa21.86■■□□□ 1.09
PABPC4-201ENST00000372856 CCDC184Q52MB2 194 aa21.85■■□□□ 1.09
PABPC4-201ENST00000372856 ARHGEF11O15085 1522 aa21.85■■□□□ 1.09
PABPC4-201ENST00000372856 LAMC3Q9Y6N6 1575 aa21.85■■□□□ 1.09
PABPC4-201ENST00000372856 NBR1Q14596 966 aa21.85■■□□□ 1.09
PABPC4-201ENST00000372856 KDM6BO15054 1643 aa21.83■■□□□ 1.08
PABPC4-201ENST00000372856 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.82■■□□□ 1.08
PABPC4-201ENST00000372856 C11orf95C9JLR9 678 aaPredicted RBP21.82■■□□□ 1.08
PABPC4-201ENST00000372856 TCOF1Q13428 1488 aaKnown RBP21.81■■□□□ 1.08
PABPC4-201ENST00000372856 PDS5BQ9NTI5 1447 aa21.81■■□□□ 1.08
PABPC4-201ENST00000372856 RTN4Q9NQC3 1192 aaKnown RBP21.81■■□□□ 1.08
PABPC4-201ENST00000372856 FANCIQ9NVI1 1328 aa21.8■■□□□ 1.08
PABPC4-201ENST00000372856 CDK13Q14004 1512 aaKnown RBP21.79■■□□□ 1.08
PABPC4-201ENST00000372856 EPRSP07814 1512 aaKnown RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms