RNA–Protein interactions for RNA: ENST00000372633.1

RAB40A-202, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 BASIC

Gene RAB40A, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-202ENST00000372633 ITGAEP38570 1179 aa19.58■□□□□ 0.72
RAB40A-202ENST00000372633 TIMELESSQ9UNS1 1208 aa19.57■□□□□ 0.72
RAB40A-202ENST00000372633 IGF1RP08069 1367 aa19.57■□□□□ 0.72
RAB40A-202ENST00000372633 CFAP43Q8NDM7 1665 aa19.55■□□□□ 0.72
RAB40A-202ENST00000372633 PPP1R15AO75807 674 aaPredicted RBP19.54■□□□□ 0.72
RAB40A-202ENST00000372633 PHLDB1Q86UU1 1377 aa19.54■□□□□ 0.72
RAB40A-202ENST00000372633 DDX10Q13206 875 aaKnown RBP19.5■□□□□ 0.71
RAB40A-202ENST00000372633 FHAD1B1AJZ9 1412 aa19.49■□□□□ 0.71
RAB40A-202ENST00000372633 CCER2I3L3R5 266 aa19.48■□□□□ 0.71
RAB40A-202ENST00000372633 SIN3AQ96ST3 1273 aa19.47■□□□□ 0.71
RAB40A-202ENST00000372633 FKBP8Q14318 412 aa19.47■□□□□ 0.71
RAB40A-202ENST00000372633 CARMIL1Q5VZK9 1371 aa19.46■□□□□ 0.71
RAB40A-202ENST00000372633 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.46■□□□□ 0.71
RAB40A-202ENST00000372633 PCF11O94913 1555 aaKnown RBP19.44■□□□□ 0.7
RAB40A-202ENST00000372633 BCANQ96GW7 911 aa19.4■□□□□ 0.7
RAB40A-202ENST00000372633 FAM50AQ14320 339 aaKnown RBP19.38■□□□□ 0.69
RAB40A-202ENST00000372633 FGD5Q6ZNL6 1462 aa19.37■□□□□ 0.69
RAB40A-202ENST00000372633 FYCO1Q9BQS8 1478 aa19.37■□□□□ 0.69
RAB40A-202ENST00000372633 AQRO60306 1485 aaKnown RBP eCLIP19.36■□□□□ 0.69
RAB40A-202ENST00000372633 ANP32CO43423 234 aa19.35■□□□□ 0.69
RAB40A-202ENST00000372633 NEFLP07196 543 aa19.35■□□□□ 0.69
RAB40A-202ENST00000372633 EFCAB5A4FU69 1503 aa19.33■□□□□ 0.69
RAB40A-202ENST00000372633 RBM19Q9Y4C8 960 aaKnown RBP19.33■□□□□ 0.68
RAB40A-202ENST00000372633 CASKIN1Q8WXD9 1431 aa19.32■□□□□ 0.68
RAB40A-202ENST00000372633 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
RAB40A-202ENST00000372633 TRIM52Q96A61 297 aa19.28■□□□□ 0.68
RAB40A-202ENST00000372633 HIRIP3Q9BW71 556 aaPredicted RBP19.27■□□□□ 0.67
RAB40A-202ENST00000372633 FGD6Q6ZV73 1430 aa19.26■□□□□ 0.67
RAB40A-202ENST00000372633 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
RAB40A-202ENST00000372633 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
RAB40A-202ENST00000372633 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
RAB40A-202ENST00000372633 HFM1A2PYH4 1435 aa19.25■□□□□ 0.67
RAB40A-202ENST00000372633 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
RAB40A-202ENST00000372633 CTTNBP2Q8WZ74 1663 aa19.22■□□□□ 0.67
RAB40A-202ENST00000372633 PTPN23Q9H3S7 1636 aa19.22■□□□□ 0.67
RAB40A-202ENST00000372633 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
RAB40A-202ENST00000372633 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
RAB40A-202ENST00000372633 P3H3Q8IVL6 736 aa19.21■□□□□ 0.67
RAB40A-202ENST00000372633 CUL7Q14999 1698 aa19.2■□□□□ 0.66
RAB40A-202ENST00000372633 ABCA10Q8WWZ4 1543 aa19.2■□□□□ 0.66
RAB40A-202ENST00000372633 SNAPC4Q5SXM2 1469 aa19.19■□□□□ 0.66
RAB40A-202ENST00000372633 PTPRKQ15262 1439 aa19.19■□□□□ 0.66
RAB40A-202ENST00000372633 FMN1Q68DA7 1419 aa19.18■□□□□ 0.66
RAB40A-202ENST00000372633 BCL11AQ9H165 835 aa19.16■□□□□ 0.66
RAB40A-202ENST00000372633 ATP1B4Q9UN42 357 aaPredicted RBP19.16■□□□□ 0.66
RAB40A-202ENST00000372633 NAIPQ13075 1403 aa19.15■□□□□ 0.66
RAB40A-202ENST00000372633 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
RAB40A-202ENST00000372633 LRRIQ1Q96JM4 1722 aa19.13■□□□□ 0.65
RAB40A-202ENST00000372633 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
RAB40A-202ENST00000372633 FANCIQ9NVI1 1328 aa19.11■□□□□ 0.65
RAB40A-202ENST00000372633 SAMD9Q5K651 1589 aa19.1■□□□□ 0.65
RAB40A-202ENST00000372633 MSH5O43196 834 aa19.1■□□□□ 0.65
RAB40A-202ENST00000372633 RAD54L2Q9Y4B4 1467 aa19.1■□□□□ 0.65
RAB40A-202ENST00000372633 MYOM3Q5VTT5 1437 aa19.09■□□□□ 0.65
RAB40A-202ENST00000372633 THOC2Q8NI27 1593 aaKnown RBP19.09■□□□□ 0.65
RAB40A-202ENST00000372633 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
RAB40A-202ENST00000372633 MTUS2Q5JR59 1369 aa19.09■□□□□ 0.65
RAB40A-202ENST00000372633 ERICH6BQ5W0A0 696 aa19.09■□□□□ 0.65
RAB40A-202ENST00000372633 NCOA2Q15596 1464 aa19.08■□□□□ 0.64
RAB40A-202ENST00000372633 TOPBP1Q92547 1522 aa19.07■□□□□ 0.64
RAB40A-202ENST00000372633 SUPT6HQ7KZ85 1726 aaKnown RBP19.07■□□□□ 0.64
RAB40A-202ENST00000372633 GRIN2BQ13224 1484 aa19.06■□□□□ 0.64
RAB40A-202ENST00000372633 HNRNPUQ00839 825 aaKnown RBP eCLIP19.06■□□□□ 0.64
RAB40A-202ENST00000372633 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
RAB40A-202ENST00000372633 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
RAB40A-202ENST00000372633 WASHC2AQ641Q2 1341 aa19.04■□□□□ 0.64
RAB40A-202ENST00000372633 GCC2Q8IWJ2 1684 aa19.03■□□□□ 0.64
RAB40A-202ENST00000372633 EHBP1L1Q8N3D4 1523 aa19.03■□□□□ 0.64
RAB40A-202ENST00000372633 DENND4BO75064 1496 aaPredicted RBP19.02■□□□□ 0.64
RAB40A-202ENST00000372633 UGGT2Q9NYU1 1516 aa19.02■□□□□ 0.63
RAB40A-202ENST00000372633 CDK11AQ9UQ88 783 aaPredicted RBP19.02■□□□□ 0.63
RAB40A-202ENST00000372633 TCOF1Q13428 1488 aaKnown RBP18.99■□□□□ 0.63
RAB40A-202ENST00000372633 AKNAQ7Z591 1439 aa18.99■□□□□ 0.63
RAB40A-202ENST00000372633 HSPA5P11021 654 aaKnown RBP18.99■□□□□ 0.63
RAB40A-202ENST00000372633 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
RAB40A-202ENST00000372633 CNTLNQ9NXG0 1405 aa18.98■□□□□ 0.63
RAB40A-202ENST00000372633 PPP4R2Q9NY27 417 aa18.95■□□□□ 0.62
RAB40A-202ENST00000372633 ABCA5Q8WWZ7 1642 aa18.94■□□□□ 0.62
RAB40A-202ENST00000372633 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
RAB40A-202ENST00000372633 MAGI3Q5TCQ9 1506 aa18.93■□□□□ 0.62
RAB40A-202ENST00000372633 IRX6P78412 446 aaPredicted RBP18.93■□□□□ 0.62
RAB40A-202ENST00000372633 NCOA1Q15788 1441 aa18.92■□□□□ 0.62
RAB40A-202ENST00000372633 KDM6BO15054 1643 aa18.9■□□□□ 0.62
RAB40A-202ENST00000372633 CCDC184Q52MB2 194 aa18.89■□□□□ 0.61
RAB40A-202ENST00000372633 POLR1AO95602 1720 aaPredicted RBP18.89■□□□□ 0.61
RAB40A-202ENST00000372633 PRKRIP1Q9H875 184 aaPredicted RBP18.89■□□□□ 0.61
RAB40A-202ENST00000372633 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
RAB40A-202ENST00000372633 ZBED9Q6R2W3 1325 aa18.88■□□□□ 0.61
RAB40A-202ENST00000372633 RRP7BPQ9NSQ0 103 aa18.86■□□□□ 0.61
RAB40A-202ENST00000372633 MIA2Q96PC5 1412 aa18.85■□□□□ 0.61
RAB40A-202ENST00000372633 C11orf95C9JLR9 678 aaPredicted RBP18.85■□□□□ 0.61
RAB40A-202ENST00000372633 URB2Q14146 1524 aaKnown RBP18.84■□□□□ 0.61
RAB40A-202ENST00000372633 MPHOSPH9Q99550 1183 aa18.84■□□□□ 0.61
RAB40A-202ENST00000372633 L3MBTL2Q969R5 705 aa18.84■□□□□ 0.61
RAB40A-202ENST00000372633 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
RAB40A-202ENST00000372633 NESP48681 1621 aa18.83■□□□□ 0.6
RAB40A-202ENST00000372633 SPATA31E1Q6ZUB1 1445 aa18.82■□□□□ 0.6
RAB40A-202ENST00000372633 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
RAB40A-202ENST00000372633 RPRD2Q5VT52 1461 aaKnown RBP18.82■□□□□ 0.6
RAB40A-202ENST00000372633 ERICH6Q7L0X2 663 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms