RNA–Protein interactions for RNA: ENST00000372429.7

USP20-203, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-203ENST00000372429 BIVM-ERCC5R4GMW8 1640 aa17.32■□□□□ 0.36
USP20-203ENST00000372429 NEFLP07196 543 aa17.28■□□□□ 0.36
USP20-203ENST00000372429 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
USP20-203ENST00000372429 DNMBPQ6XZF7 1577 aa17.24■□□□□ 0.35
USP20-203ENST00000372429 LAMC3Q9Y6N6 1575 aa17.24■□□□□ 0.35
USP20-203ENST00000372429 URB2Q14146 1524 aaKnown RBP17.22■□□□□ 0.35
USP20-203ENST00000372429 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
USP20-203ENST00000372429 GAPVD1Q14C86 1478 aa17.21■□□□□ 0.35
USP20-203ENST00000372429 FHOD3Q2V2M9 1422 aa17.21■□□□□ 0.35
USP20-203ENST00000372429 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.351e-7■■■■■ 33.9
USP20-203ENST00000372429 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
USP20-203ENST00000372429 CLSPNQ9HAW4 1339 aa17.16■□□□□ 0.34
USP20-203ENST00000372429 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
USP20-203ENST00000372429 ARHGAP35Q9NRY4 1499 aa17.14■□□□□ 0.33
USP20-203ENST00000372429 BCANQ96GW7 911 aa17.14■□□□□ 0.33
USP20-203ENST00000372429 ABCA10Q8WWZ4 1543 aa17.13■□□□□ 0.33
USP20-203ENST00000372429 FHAD1B1AJZ9 1412 aa17.12■□□□□ 0.33
USP20-203ENST00000372429 MRC2Q9UBG0 1479 aa17.1■□□□□ 0.33
USP20-203ENST00000372429 ERICH6Q7L0X2 663 aa17.1■□□□□ 0.33
USP20-203ENST00000372429 CCNB3Q8WWL7 1395 aa17.05■□□□□ 0.32
USP20-203ENST00000372429 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
USP20-203ENST00000372429 CHIC2Q9UKJ5 165 aa17.03■□□□□ 0.32
USP20-203ENST00000372429 ZNF777Q9ULD5 760 aaPredicted RBP17.02■□□□□ 0.31
USP20-203ENST00000372429 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
USP20-203ENST00000372429 FMN1Q68DA7 1419 aa16.99■□□□□ 0.31
USP20-203ENST00000372429 ZNF608Q9ULD9 1512 aaPredicted RBP16.99■□□□□ 0.31
USP20-203ENST00000372429 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
USP20-203ENST00000372429 CDK11AQ9UQ88 783 aaPredicted RBP16.98■□□□□ 0.31
USP20-203ENST00000372429 SUPT16HQ9Y5B9 1047 aaKnown RBP16.97■□□□□ 0.31
USP20-203ENST00000372429 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
USP20-203ENST00000372429 FKBP8Q14318 412 aa16.94■□□□□ 0.3
USP20-203ENST00000372429 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
USP20-203ENST00000372429 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
USP20-203ENST00000372429 DDX10Q13206 875 aaKnown RBP16.91■□□□□ 0.3
USP20-203ENST00000372429 ANP32CO43423 234 aa16.9■□□□□ 0.3
USP20-203ENST00000372429 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
USP20-203ENST00000372429 SNAPC4Q5SXM2 1469 aa16.89■□□□□ 0.29
USP20-203ENST00000372429 PHLDB1Q86UU1 1377 aa16.89■□□□□ 0.29
USP20-203ENST00000372429 CUL7Q14999 1698 aa16.87■□□□□ 0.29
USP20-203ENST00000372429 LRRC9Q6ZRR7 1453 aa16.86■□□□□ 0.29
USP20-203ENST00000372429 CASKIN1Q8WXD9 1431 aa16.83■□□□□ 0.28
USP20-203ENST00000372429 PLEKHD1A6NEE1 506 aa16.81■□□□□ 0.28
USP20-203ENST00000372429 MYT1LQ9UL68 1186 aa16.81■□□□□ 0.28
USP20-203ENST00000372429 RAB3GAP2Q9H2M9 1393 aa16.81■□□□□ 0.28
USP20-203ENST00000372429 ANP32EQ9BTT0 268 aa16.81■□□□□ 0.28
USP20-203ENST00000372429 PCF11O94913 1555 aaKnown RBP16.81■□□□□ 0.28
USP20-203ENST00000372429 EFCAB5A4FU69 1503 aa16.8■□□□□ 0.28
USP20-203ENST00000372429 TIAM1Q13009 1591 aa16.79■□□□□ 0.28
USP20-203ENST00000372429 SIN3AQ96ST3 1273 aa16.79■□□□□ 0.28
USP20-203ENST00000372429 CARMIL2Q6F5E8 1435 aa16.78■□□□□ 0.28
USP20-203ENST00000372429 KCNH8Q96L42 1107 aa16.78■□□□□ 0.28
USP20-203ENST00000372429 CFDP1Q9UEE9 299 aaPredicted RBP16.78■□□□□ 0.28
USP20-203ENST00000372429 FYCO1Q9BQS8 1478 aa16.78■□□□□ 0.28
USP20-203ENST00000372429 ABCA5Q8WWZ7 1642 aa16.76■□□□□ 0.27
USP20-203ENST00000372429 DHX57Q6P158 1386 aaKnown RBP16.75■□□□□ 0.27
USP20-203ENST00000372429 SETD5Q9C0A6 1442 aa16.75■□□□□ 0.27
USP20-203ENST00000372429 RRBP1Q9P2E9 1410 aaKnown RBP16.75■□□□□ 0.27
USP20-203ENST00000372429 HIRIP3Q9BW71 556 aaPredicted RBP16.74■□□□□ 0.27
USP20-203ENST00000372429 TSHZ2Q9NRE2 1034 aa16.74■□□□□ 0.27
USP20-203ENST00000372429 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
USP20-203ENST00000372429 IQGAP2Q13576 1575 aa16.73■□□□□ 0.27
USP20-203ENST00000372429 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
USP20-203ENST00000372429 WDR62O43379 1518 aa16.71■□□□□ 0.27
USP20-203ENST00000372429 KIAA0586Q9BVV6 1533 aa16.69■□□□□ 0.26
USP20-203ENST00000372429 FGD6Q6ZV73 1430 aa16.68■□□□□ 0.26
USP20-203ENST00000372429 NCOA2Q15596 1464 aa16.68■□□□□ 0.26
USP20-203ENST00000372429 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
USP20-203ENST00000372429 CTTNBP2Q8WZ74 1663 aa16.66■□□□□ 0.26
USP20-203ENST00000372429 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
USP20-203ENST00000372429 CDK13Q14004 1512 aaKnown RBP16.66■□□□□ 0.26
USP20-203ENST00000372429 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
USP20-203ENST00000372429 ZNF326Q5BKZ1 582 aaKnown RBP16.66■□□□□ 0.26
USP20-203ENST00000372429 ADAMTS12P58397 1594 aa16.66■□□□□ 0.26
USP20-203ENST00000372429 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
USP20-203ENST00000372429 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP20-203ENST00000372429 TSPY4P0CV99 314 aa16.64■□□□□ 0.26
USP20-203ENST00000372429 TSPY10P0CW01 314 aa16.64■□□□□ 0.26
USP20-203ENST00000372429 MAGI1Q96QZ7 1491 aaPredicted RBP16.64■□□□□ 0.25
USP20-203ENST00000372429 PTPRGP23470 1445 aa16.64■□□□□ 0.25
USP20-203ENST00000372429 CCDC18Q5T9S5 1454 aa16.64■□□□□ 0.25
USP20-203ENST00000372429 MYOM3Q5VTT5 1437 aa16.63■□□□□ 0.25
USP20-203ENST00000372429 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
USP20-203ENST00000372429 CNGB1Q14028 1251 aaPredicted RBP16.62■□□□□ 0.25
USP20-203ENST00000372429 FOXD1Q16676 465 aa16.62■□□□□ 0.25
USP20-203ENST00000372429 POLR3GLQ9BT43 218 aa16.61■□□□□ 0.25
USP20-203ENST00000372429 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
USP20-203ENST00000372429 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
USP20-203ENST00000372429 PRG4Q92954 1404 aaPredicted RBP16.6■□□□□ 0.25
USP20-203ENST00000372429 EPRSP07814 1512 aaKnown RBP16.6■□□□□ 0.25
USP20-203ENST00000372429 MAP3K1Q13233 1512 aa16.59■□□□□ 0.25
USP20-203ENST00000372429 PLB1Q6P1J6 1458 aa16.59■□□□□ 0.25
USP20-203ENST00000372429 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.58■□□□□ 0.24
USP20-203ENST00000372429 IRX6P78412 446 aaPredicted RBP16.56■□□□□ 0.24
USP20-203ENST00000372429 NPM1P06748 294 aaKnown RBP eCLIP16.54■□□□□ 0.24
USP20-203ENST00000372429 HECW1Q76N89 1606 aa16.54■□□□□ 0.24
USP20-203ENST00000372429 RBM19Q9Y4C8 960 aaKnown RBP16.54■□□□□ 0.24
USP20-203ENST00000372429 HNRNPMP52272 730 aaKnown RBP eCLIP16.53■□□□□ 0.24
USP20-203ENST00000372429 EHBP1L1Q8N3D4 1523 aa16.53■□□□□ 0.24
USP20-203ENST00000372429 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
USP20-203ENST00000372429 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms