RNA–Protein interactions for RNA: ENST00000370500.9

GTF2B-201, Transcript of general transcription factor IIB, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2B, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-201ENST00000370500 ZNF608Q9ULD9 1512 aaPredicted RBP16.59■□□□□ 0.25
GTF2B-201ENST00000370500 OSCARQ8IYS5 282 aa16.57■□□□□ 0.24
GTF2B-201ENST00000370500 CUX1P39880 1505 aa16.57■□□□□ 0.24
GTF2B-201ENST00000370500 TARBP1Q13395 1621 aaKnown RBP16.57■□□□□ 0.24
GTF2B-201ENST00000370500 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
GTF2B-201ENST00000370500 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
GTF2B-201ENST00000370500 RAD54L2Q9Y4B4 1467 aa16.52■□□□□ 0.24
GTF2B-201ENST00000370500 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.23
GTF2B-201ENST00000370500 WDR97A6NE52 1622 aa16.51■□□□□ 0.23
GTF2B-201ENST00000370500 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
GTF2B-201ENST00000370500 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
GTF2B-201ENST00000370500 WRNQ14191 1432 aaPredicted RBP eCLIP16.47■□□□□ 0.23
GTF2B-201ENST00000370500 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
GTF2B-201ENST00000370500 ZBTB22O15209 634 aa16.45■□□□□ 0.22
GTF2B-201ENST00000370500 TOP2BQ02880 1626 aa16.42■□□□□ 0.22
GTF2B-201ENST00000370500 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
GTF2B-201ENST00000370500 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
GTF2B-201ENST00000370500 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
GTF2B-201ENST00000370500 BIVM-ERCC5R4GMW8 1640 aa16.39■□□□□ 0.21
GTF2B-201ENST00000370500 GAPVD1Q14C86 1478 aa16.38■□□□□ 0.21
GTF2B-201ENST00000370500 MAGI1Q96QZ7 1491 aaPredicted RBP16.38■□□□□ 0.21
GTF2B-201ENST00000370500 FBLN2P98095 1184 aa16.37■□□□□ 0.21
GTF2B-201ENST00000370500 SYNJ1O43426 1573 aa16.36■□□□□ 0.21
GTF2B-201ENST00000370500 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
GTF2B-201ENST00000370500 SNAPC4Q5SXM2 1469 aa16.34■□□□□ 0.21
GTF2B-201ENST00000370500 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
GTF2B-201ENST00000370500 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
GTF2B-201ENST00000370500 CHD1O14646 1710 aa16.28■□□□□ 0.2
GTF2B-201ENST00000370500 REM2Q8IYK8 340 aaPredicted RBP16.27■□□□□ 0.2
GTF2B-201ENST00000370500 PBRM1Q86U86 1689 aa16.26■□□□□ 0.19
GTF2B-201ENST00000370500 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
GTF2B-201ENST00000370500 TRIM41Q8WV44 630 aa16.21■□□□□ 0.19
GTF2B-201ENST00000370500 FHAD1B1AJZ9 1412 aa16.2■□□□□ 0.18
GTF2B-201ENST00000370500 ARHGEF11O15085 1522 aa16.2■□□□□ 0.18
GTF2B-201ENST00000370500 RIMBP3CA6NJZ7 1639 aa16.18■□□□□ 0.18
GTF2B-201ENST00000370500 RIMBP3BA6NNM3 1639 aa16.18■□□□□ 0.18
GTF2B-201ENST00000370500 RIMBP3Q9UFD9 1639 aa16.18■□□□□ 0.18
GTF2B-201ENST00000370500 CLASP1Q7Z460 1538 aa16.17■□□□□ 0.18
GTF2B-201ENST00000370500 KIF27Q86VH2 1401 aa16.17■□□□□ 0.18
GTF2B-201ENST00000370500 GRIN2AQ12879 1464 aa16.17■□□□□ 0.18
GTF2B-201ENST00000370500 ADAMTS12P58397 1594 aa16.15■□□□□ 0.18
GTF2B-201ENST00000370500 IGF1RP08069 1367 aa16.11■□□□□ 0.17
GTF2B-201ENST00000370500 NUP160Q12769 1436 aa16.11■□□□□ 0.17
GTF2B-201ENST00000370500 CYB5RLQ6IPT4 315 aa16.11■□□□□ 0.17
GTF2B-201ENST00000370500 PIP4P2Q8N4L2 257 aa16.1■□□□□ 0.17
GTF2B-201ENST00000370500 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
GTF2B-201ENST00000370500 SPDYE2BA6NHP3 402 aa16.07■□□□□ 0.16
GTF2B-201ENST00000370500 SPDYE6P0CI01 402 aa16.07■□□□□ 0.16
GTF2B-201ENST00000370500 SPDYE2Q495Y8 402 aa16.07■□□□□ 0.16
GTF2B-201ENST00000370500 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
GTF2B-201ENST00000370500 CEP170Q5SW79 1584 aa16.04■□□□□ 0.16
GTF2B-201ENST00000370500 CUL7Q14999 1698 aa16.02■□□□□ 0.16
GTF2B-201ENST00000370500 CARMIL1Q5VZK9 1371 aa16.01■□□□□ 0.15
GTF2B-201ENST00000370500 SP7Q8TDD2 431 aaPredicted RBP16■□□□□ 0.15
GTF2B-201ENST00000370500 JPH4Q96JJ6 628 aa16■□□□□ 0.15
GTF2B-201ENST00000370500 FXR2P51116 673 aaKnown RBP eCLIP15.99■□□□□ 0.15
GTF2B-201ENST00000370500 SHROOM2Q13796 1616 aa15.96■□□□□ 0.15
GTF2B-201ENST00000370500 KIAA0586Q9BVV6 1533 aa15.95■□□□□ 0.14
GTF2B-201ENST00000370500 PRG4Q92954 1404 aaPredicted RBP15.93■□□□□ 0.14
GTF2B-201ENST00000370500 RUSC2Q8N2Y8 1516 aa15.92■□□□□ 0.14
GTF2B-201ENST00000370500 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.14
GTF2B-201ENST00000370500 ERCC6L2Q5T890 1561 aa15.88■□□□□ 0.13
GTF2B-201ENST00000370500 HAX1O00165 279 aa15.87■□□□□ 0.13
GTF2B-201ENST00000370500 MKRN4PQ13434 485 aaPredicted RBP15.87■□□□□ 0.13
GTF2B-201ENST00000370500 SPDYE1Q8NFV5 336 aaPredicted RBP15.84■□□□□ 0.13
GTF2B-201ENST00000370500 ZNF692Q9BU19 519 aaPredicted RBP15.83■□□□□ 0.12
GTF2B-201ENST00000370500 EEA1Q15075 1411 aa15.81■□□□□ 0.12
GTF2B-201ENST00000370500 CARMIL2Q6F5E8 1435 aa15.81■□□□□ 0.12
GTF2B-201ENST00000370500 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
GTF2B-201ENST00000370500 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
GTF2B-201ENST00000370500 IQGAP2Q13576 1575 aa15.79■□□□□ 0.12
GTF2B-201ENST00000370500 SSUH2Q9Y2M2 353 aa15.79■□□□□ 0.12
GTF2B-201ENST00000370500 CLEC11AQ9Y240 323 aa15.78■□□□□ 0.12
GTF2B-201ENST00000370500 NPM1P06748 294 aaKnown RBP eCLIP15.76■□□□□ 0.11
GTF2B-201ENST00000370500 PTPRGP23470 1445 aa15.76■□□□□ 0.11
GTF2B-201ENST00000370500 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
GTF2B-201ENST00000370500 UGGT2Q9NYU1 1516 aa15.74■□□□□ 0.11
GTF2B-201ENST00000370500 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
GTF2B-201ENST00000370500 PRKAR2AP13861 404 aaKnown RBP15.69■□□□□ 0.1
GTF2B-201ENST00000370500 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
GTF2B-201ENST00000370500 CTTNBP2Q8WZ74 1663 aa15.66■□□□□ 0.1
GTF2B-201ENST00000370500 FAM9AQ8IZU1 332 aaPredicted RBP15.65■□□□□ 0.1
GTF2B-201ENST00000370500 UHRF1BP1LA0JNW5 1464 aa15.64■□□□□ 0.09
GTF2B-201ENST00000370500 ADCY10Q96PN6 1610 aa15.64■□□□□ 0.09
GTF2B-201ENST00000370500 UACAQ9BZF9 1416 aa15.63■□□□□ 0.09
GTF2B-201ENST00000370500 MAPKBP1O60336 1514 aa15.63■□□□□ 0.09
GTF2B-201ENST00000370500 TTBK1Q5TCY1 1321 aaPredicted RBP15.62■□□□□ 0.09
GTF2B-201ENST00000370500 KIAA0556O60303 1618 aa15.62■□□□□ 0.09
GTF2B-201ENST00000370500 ABCC2Q92887 1545 aa15.61■□□□□ 0.09
GTF2B-201ENST00000370500 ABCC10Q5T3U5 1492 aa15.58■□□□□ 0.08
GTF2B-201ENST00000370500 KIF21BO75037 1637 aa15.57■□□□□ 0.08
GTF2B-201ENST00000370500 FAM69CQ0P6D2 419 aa15.57■□□□□ 0.08
GTF2B-201ENST00000370500 EVX2Q03828 476 aa15.55■□□□□ 0.08
GTF2B-201ENST00000370500 KDM5BQ9UGL1 1544 aa15.54■□□□□ 0.08
GTF2B-201ENST00000370500 PLB1Q6P1J6 1458 aa15.54■□□□□ 0.08
GTF2B-201ENST00000370500 PRR29P0C7W0 189 aa15.52■□□□□ 0.08
GTF2B-201ENST00000370500 ASXL2Q76L83 1435 aa15.51■□□□□ 0.07
GTF2B-201ENST00000370500 UBTFP17480 764 aaKnown RBP15.49■□□□□ 0.07
GTF2B-201ENST00000370500 SAMD9Q5K651 1589 aa15.49■□□□□ 0.07
GTF2B-201ENST00000370500 DIP2BQ9P265 1576 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms