RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 IGF1RP08069 1367 aa16.19■□□□□ 0.18
TWNK-202ENST00000370228 ABCA10Q8WWZ4 1543 aa16.17■□□□□ 0.18
TWNK-202ENST00000370228 EIF4G3O43432 1585 aaKnown RBP16.14■□□□□ 0.17
TWNK-202ENST00000370228 SNAPC4Q5SXM2 1469 aa16.13■□□□□ 0.17
TWNK-202ENST00000370228 P3H3Q8IVL6 736 aa16.13■□□□□ 0.17
TWNK-202ENST00000370228 CARMIL1Q5VZK9 1371 aa16.12■□□□□ 0.17
TWNK-202ENST00000370228 RAPGEF2Q9Y4G8 1499 aa16.09■□□□□ 0.17
TWNK-202ENST00000370228 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
TWNK-202ENST00000370228 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
TWNK-202ENST00000370228 ABCA5Q8WWZ7 1642 aa16.02■□□□□ 0.16
TWNK-202ENST00000370228 WDR97A6NE52 1622 aa16.02■□□□□ 0.15
TWNK-202ENST00000370228 PLEKHG5O94827 1062 aa16.01■□□□□ 0.15
TWNK-202ENST00000370228 ARID3CA6NKF2 412 aa16.01■□□□□ 0.15
TWNK-202ENST00000370228 DIEXFQ68CQ4 756 aaKnown RBP15.99■□□□□ 0.15
TWNK-202ENST00000370228 ATP1B4Q9UN42 357 aaPredicted RBP15.97■□□□□ 0.15
TWNK-202ENST00000370228 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
TWNK-202ENST00000370228 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
TWNK-202ENST00000370228 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
TWNK-202ENST00000370228 EEA1Q15075 1411 aa15.94■□□□□ 0.14
TWNK-202ENST00000370228 PRXQ9BXM0 1461 aa15.93■□□□□ 0.14
TWNK-202ENST00000370228 ERICH3Q5RHP9 1530 aa15.92■□□□□ 0.14
TWNK-202ENST00000370228 SYNJ2O15056 1496 aa15.92■□□□□ 0.14
TWNK-202ENST00000370228 SALL2Q9Y467 1007 aaPredicted RBP15.9■□□□□ 0.14
TWNK-202ENST00000370228 GRIN2AQ12879 1464 aa15.9■□□□□ 0.14
TWNK-202ENST00000370228 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.14
TWNK-202ENST00000370228 GOLGA3Q08378 1498 aa15.89■□□□□ 0.13
TWNK-202ENST00000370228 ADAMTS12P58397 1594 aa15.89■□□□□ 0.13
TWNK-202ENST00000370228 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
TWNK-202ENST00000370228 CHD1O14646 1710 aa15.86■□□□□ 0.13
TWNK-202ENST00000370228 CCDC136Q96JN2 1154 aa15.82■□□□□ 0.12
TWNK-202ENST00000370228 PKNOX2Q96KN3 472 aa15.81■□□□□ 0.12
TWNK-202ENST00000370228 CEP170Q5SW79 1584 aa15.81■□□□□ 0.12
TWNK-202ENST00000370228 CYB5RLQ6IPT4 315 aa15.81■□□□□ 0.12
TWNK-202ENST00000370228 YTHDC1Q96MU7 727 aaKnown RBP15.8■□□□□ 0.12
TWNK-202ENST00000370228 CUL7Q14999 1698 aa15.79■□□□□ 0.12
TWNK-202ENST00000370228 SUPT16HQ9Y5B9 1047 aaKnown RBP15.79■□□□□ 0.12
TWNK-202ENST00000370228 CEP162Q5TB80 1403 aa15.79■□□□□ 0.12
TWNK-202ENST00000370228 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
TWNK-202ENST00000370228 FHOD3Q2V2M9 1422 aa15.77■□□□□ 0.11
TWNK-202ENST00000370228 CLSPNQ9HAW4 1339 aa15.77■□□□□ 0.11
TWNK-202ENST00000370228 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.11
TWNK-202ENST00000370228 KIF21BO75037 1637 aa15.76■□□□□ 0.11
TWNK-202ENST00000370228 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.76■□□□□ 0.11
TWNK-202ENST00000370228 HNRNPUL2Q1KMD3 747 aaKnown RBP15.76■□□□□ 0.11
TWNK-202ENST00000370228 CLIP1P30622 1438 aa15.76■□□□□ 0.11
TWNK-202ENST00000370228 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
TWNK-202ENST00000370228 TNIKQ9UKE5 1360 aa15.75■□□□□ 0.11
TWNK-202ENST00000370228 ERICH6BQ5W0A0 696 aa15.75■□□□□ 0.11
TWNK-202ENST00000370228 ERCC6L2Q5T890 1561 aa15.74■□□□□ 0.11
TWNK-202ENST00000370228 NUP160Q12769 1436 aa15.72■□□□□ 0.11
TWNK-202ENST00000370228 KIAA0586Q9BVV6 1533 aa15.7■□□□□ 0.1
TWNK-202ENST00000370228 IQGAP2Q13576 1575 aa15.68■□□□□ 0.1
TWNK-202ENST00000370228 ARAP1Q96P48 1450 aa15.66■□□□□ 0.1
TWNK-202ENST00000370228 ARHGAP35Q9NRY4 1499 aa15.65■□□□□ 0.1
TWNK-202ENST00000370228 MYT1LQ9UL68 1186 aa15.65■□□□□ 0.1
TWNK-202ENST00000370228 DEKP35659 375 aaKnown RBP15.61■□□□□ 0.09
TWNK-202ENST00000370228 DISP1Q96F81 1524 aa15.61■□□□□ 0.09
TWNK-202ENST00000370228 CTTNBP2Q8WZ74 1663 aa15.6■□□□□ 0.09
TWNK-202ENST00000370228 PTPRGP23470 1445 aa15.6■□□□□ 0.09
TWNK-202ENST00000370228 PLB1Q6P1J6 1458 aa15.59■□□□□ 0.09
TWNK-202ENST00000370228 CARMIL2Q6F5E8 1435 aa15.59■□□□□ 0.09
TWNK-202ENST00000370228 DNAJC5Q9H3Z4 198 aa15.59■□□□□ 0.09
TWNK-202ENST00000370228 CLASP1Q7Z460 1538 aa15.57■□□□□ 0.08
TWNK-202ENST00000370228 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
TWNK-202ENST00000370228 ARHGEF11O15085 1522 aa15.57■□□□□ 0.08
TWNK-202ENST00000370228 MSH5O43196 834 aa15.55■□□□□ 0.08
TWNK-202ENST00000370228 RBM19Q9Y4C8 960 aaKnown RBP15.54■□□□□ 0.08
TWNK-202ENST00000370228 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.54■□□□□ 0.08
TWNK-202ENST00000370228 KANK4Q5T7N3 995 aaPredicted RBP15.52■□□□□ 0.08
TWNK-202ENST00000370228 KIAA0556O60303 1618 aa15.5■□□□□ 0.07
TWNK-202ENST00000370228 UGGT2Q9NYU1 1516 aa15.5■□□□□ 0.07
TWNK-202ENST00000370228 RIMBP3CA6NJZ7 1639 aa15.47■□□□□ 0.07
TWNK-202ENST00000370228 RIMBP3BA6NNM3 1639 aa15.47■□□□□ 0.07
TWNK-202ENST00000370228 RIMBP3Q9UFD9 1639 aa15.47■□□□□ 0.07
TWNK-202ENST00000370228 MIER1Q8N108 512 aa15.46■□□□□ 0.07
TWNK-202ENST00000370228 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
TWNK-202ENST00000370228 CDK13Q14004 1512 aaKnown RBP15.45■□□□□ 0.06
TWNK-202ENST00000370228 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
TWNK-202ENST00000370228 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
TWNK-202ENST00000370228 SAMD9Q5K651 1589 aa15.43■□□□□ 0.06
TWNK-202ENST00000370228 FMN1Q68DA7 1419 aa15.42■□□□□ 0.06
TWNK-202ENST00000370228 SHROOM2Q13796 1616 aa15.42■□□□□ 0.06
TWNK-202ENST00000370228 PCF11O94913 1555 aaKnown RBP15.41■□□□□ 0.06
TWNK-202ENST00000370228 ZNF316A6NFI3 1004 aaPredicted RBP15.4■□□□□ 0.06
TWNK-202ENST00000370228 UACAQ9BZF9 1416 aa15.4■□□□□ 0.06
TWNK-202ENST00000370228 ITGAEP38570 1179 aa15.4■□□□□ 0.06
TWNK-202ENST00000370228 EFCAB5A4FU69 1503 aa15.4■□□□□ 0.06
TWNK-202ENST00000370228 NUP153P49790 1475 aaKnown RBP15.37■□□□□ 0.05
TWNK-202ENST00000370228 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
TWNK-202ENST00000370228 PLEKHD1A6NEE1 506 aa15.36■□□□□ 0.05
TWNK-202ENST00000370228 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
TWNK-202ENST00000370228 ATP10BO94823 1461 aa15.33■□□□□ 0.05
TWNK-202ENST00000370228 CASKIN1Q8WXD9 1431 aa15.33■□□□□ 0.04
TWNK-202ENST00000370228 FANCIQ9NVI1 1328 aa15.32■□□□□ 0.04
TWNK-202ENST00000370228 IL27Q8NEV9 243 aa15.32■□□□□ 0.04
TWNK-202ENST00000370228 EPRSP07814 1512 aaKnown RBP15.32■□□□□ 0.04
TWNK-202ENST00000370228 NEFLP07196 543 aa15.31■□□□□ 0.04
TWNK-202ENST00000370228 FAM69CQ0P6D2 419 aa15.31■□□□□ 0.04
TWNK-202ENST00000370228 ADCY10Q96PN6 1610 aa15.31■□□□□ 0.04
TWNK-202ENST00000370228 RAPGEF6Q8TEU7 1601 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms