RNA–Protein interactions for RNA: ENST00000369543.6

TRIM33-202, Transcript of tripartite motif containing 33, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM33, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33-202ENST00000369543 SIN3AQ96ST3 1273 aa25.72■■□□□ 1.71
TRIM33-202ENST00000369543 HMGXB3Q12766 1538 aa25.72■■□□□ 1.71
TRIM33-202ENST00000369543 CFTRP13569 1480 aa25.67■■□□□ 1.7
TRIM33-202ENST00000369543 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
TRIM33-202ENST00000369543 RAB3GAP2Q9H2M9 1393 aa25.65■■□□□ 1.7
TRIM33-202ENST00000369543 NEFLP07196 543 aa25.64■■□□□ 1.69
TRIM33-202ENST00000369543 ARHGAP35Q9NRY4 1499 aa25.64■■□□□ 1.69
TRIM33-202ENST00000369543 TRIM52Q96A61 297 aa25.63■■□□□ 1.69
TRIM33-202ENST00000369543 CUX2O14529 1486 aa25.6■■□□□ 1.69
TRIM33-202ENST00000369543 RRBP1Q9P2E9 1410 aaKnown RBP25.58■■□□□ 1.69
TRIM33-202ENST00000369543 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
TRIM33-202ENST00000369543 ERCC6Q03468 1493 aa25.56■■□□□ 1.68
TRIM33-202ENST00000369543 IGF1RP08069 1367 aa25.54■■□□□ 1.68
TRIM33-202ENST00000369543 ANP32EQ9BTT0 268 aa25.51■■□□□ 1.68
TRIM33-202ENST00000369543 RAD54L2Q9Y4B4 1467 aa25.51■■□□□ 1.67
TRIM33-202ENST00000369543 ANP32CO43423 234 aa25.48■■□□□ 1.67
TRIM33-202ENST00000369543 CARMIL1Q5VZK9 1371 aa25.47■■□□□ 1.67
TRIM33-202ENST00000369543 SETD5Q9C0A6 1442 aa25.44■■□□□ 1.66
TRIM33-202ENST00000369543 FGD5Q6ZNL6 1462 aa25.41■■□□□ 1.66
TRIM33-202ENST00000369543 PDS5BQ9NTI5 1447 aa25.38■■□□□ 1.65
TRIM33-202ENST00000369543 PHLDB1Q86UU1 1377 aa25.35■■□□□ 1.65
TRIM33-202ENST00000369543 TIAM1Q13009 1591 aa25.32■■□□□ 1.64
TRIM33-202ENST00000369543 WDR97A6NE52 1622 aa25.31■■□□□ 1.64
TRIM33-202ENST00000369543 IRX6P78412 446 aaPredicted RBP25.31■■□□□ 1.64
TRIM33-202ENST00000369543 MAPKBP1O60336 1514 aa25.3■■□□□ 1.64
TRIM33-202ENST00000369543 PPP1R15AO75807 674 aaPredicted RBP25.29■■□□□ 1.64
TRIM33-202ENST00000369543 RBM19Q9Y4C8 960 aaKnown RBP25.29■■□□□ 1.64
TRIM33-202ENST00000369543 CHMP7Q8WUX9 453 aaPredicted RBP25.27■■□□□ 1.64
TRIM33-202ENST00000369543 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
TRIM33-202ENST00000369543 TONSLQ96HA7 1378 aa25.27■■□□□ 1.64
TRIM33-202ENST00000369543 PRDM2Q13029 1718 aa25.25■■□□□ 1.63
TRIM33-202ENST00000369543 HNRNPUQ00839 825 aaKnown RBP eCLIP25.23■■□□□ 1.63
TRIM33-202ENST00000369543 FHOD3Q2V2M9 1422 aa25.23■■□□□ 1.63
TRIM33-202ENST00000369543 AQRO60306 1485 aaKnown RBP eCLIP25.19■■□□□ 1.622e-6■■■□□ 16.4
TRIM33-202ENST00000369543 FHAD1B1AJZ9 1412 aa25.18■■□□□ 1.62
TRIM33-202ENST00000369543 CCER2I3L3R5 266 aa25.17■■□□□ 1.62
TRIM33-202ENST00000369543 PCF11O94913 1555 aaKnown RBP25.16■■□□□ 1.62
TRIM33-202ENST00000369543 MAP3K1Q13233 1512 aa25.14■■□□□ 1.62
TRIM33-202ENST00000369543 ERICH6Q7L0X2 663 aa25.12■■□□□ 1.61
TRIM33-202ENST00000369543 TIMELESSQ9UNS1 1208 aa25.12■■□□□ 1.61
TRIM33-202ENST00000369543 CNGB1Q14028 1251 aaPredicted RBP25.1■■□□□ 1.61
TRIM33-202ENST00000369543 TOPBP1Q92547 1522 aa25.09■■□□□ 1.61
TRIM33-202ENST00000369543 POLA1P09884 1462 aaPredicted RBP25.08■■□□□ 1.61
TRIM33-202ENST00000369543 CHIC2Q9UKJ5 165 aa25.07■■□□□ 1.6
TRIM33-202ENST00000369543 BCL11AQ9H165 835 aa25.06■■□□□ 1.6
TRIM33-202ENST00000369543 CDK11AQ9UQ88 783 aaPredicted RBP25.05■■□□□ 1.6
TRIM33-202ENST00000369543 MTUS2Q5JR59 1369 aa25.04■■□□□ 1.6
TRIM33-202ENST00000369543 URB2Q14146 1524 aaKnown RBP25.03■■□□□ 1.6
TRIM33-202ENST00000369543 RRP7BPQ9NSQ0 103 aa25.03■■□□□ 1.6
TRIM33-202ENST00000369543 CFAP43Q8NDM7 1665 aa25■■□□□ 1.59
TRIM33-202ENST00000369543 ABCA10Q8WWZ4 1543 aa24.99■■□□□ 1.59
TRIM33-202ENST00000369543 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
TRIM33-202ENST00000369543 FAM9BQ8IZU0 186 aa24.98■■□□□ 1.59
TRIM33-202ENST00000369543 CASKIN1Q8WXD9 1431 aa24.96■■□□□ 1.59
TRIM33-202ENST00000369543 FYCO1Q9BQS8 1478 aa24.96■■□□□ 1.59
TRIM33-202ENST00000369543 HSPA5P11021 654 aaKnown RBP24.91■■□□□ 1.58
TRIM33-202ENST00000369543 CCDC18Q5T9S5 1454 aa24.9■■□□□ 1.58
TRIM33-202ENST00000369543 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
TRIM33-202ENST00000369543 MSH5O43196 834 aa24.89■■□□□ 1.58
TRIM33-202ENST00000369543 POLR3GLQ9BT43 218 aa24.89■■□□□ 1.58
TRIM33-202ENST00000369543 FGD6Q6ZV73 1430 aa24.89■■□□□ 1.58
TRIM33-202ENST00000369543 EFCAB5A4FU69 1503 aa24.88■■□□□ 1.57
TRIM33-202ENST00000369543 ZNF608Q9ULD9 1512 aaPredicted RBP24.88■■□□□ 1.57
TRIM33-202ENST00000369543 FMN1Q68DA7 1419 aa24.87■■□□□ 1.57
TRIM33-202ENST00000369543 FOXD1Q16676 465 aa24.86■■□□□ 1.57
TRIM33-202ENST00000369543 ZNF777Q9ULD5 760 aaPredicted RBP24.86■■□□□ 1.57
TRIM33-202ENST00000369543 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
TRIM33-202ENST00000369543 PTPRKQ15262 1439 aa24.84■■□□□ 1.57
TRIM33-202ENST00000369543 EIF4G2P78344 907 aaKnown RBP eCLIP24.84■■□□□ 1.57
TRIM33-202ENST00000369543 SENP3-EIF4A1A0A087X0R7 540 aa24.83■■□□□ 1.57
TRIM33-202ENST00000369543 CCDC184Q52MB2 194 aa24.83■■□□□ 1.57
TRIM33-202ENST00000369543 MRS2Q9HD23 443 aa24.82■■□□□ 1.56
TRIM33-202ENST00000369543 B4GALNT3Q6L9W6 998 aa24.82■■□□□ 1.56
TRIM33-202ENST00000369543 CUL7Q14999 1698 aa24.81■■□□□ 1.56
TRIM33-202ENST00000369543 CTTNBP2Q8WZ74 1663 aa24.81■■□□□ 1.56
TRIM33-202ENST00000369543 WASHC2AQ641Q2 1341 aa24.81■■□□□ 1.56
TRIM33-202ENST00000369543 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
TRIM33-202ENST00000369543 MRC2Q9UBG0 1479 aa24.79■■□□□ 1.56
TRIM33-202ENST00000369543 UACAQ9BZF9 1416 aa24.79■■□□□ 1.56
TRIM33-202ENST00000369543 KIF21AQ7Z4S6 1674 aa24.78■■□□□ 1.56
TRIM33-202ENST00000369543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.78■■□□□ 1.563e-6■□□□□ 10.4
TRIM33-202ENST00000369543 NCOA2Q15596 1464 aa24.74■■□□□ 1.55
TRIM33-202ENST00000369543 PPP4R2Q9NY27 417 aa24.73■■□□□ 1.55
TRIM33-202ENST00000369543 L3MBTL2Q969R5 705 aa24.71■■□□□ 1.55
TRIM33-202ENST00000369543 HFM1A2PYH4 1435 aa24.71■■□□□ 1.55
TRIM33-202ENST00000369543 ZNF326Q5BKZ1 582 aaKnown RBP24.7■■□□□ 1.55
TRIM33-202ENST00000369543 MYOM3Q5VTT5 1437 aa24.69■■□□□ 1.54
TRIM33-202ENST00000369543 NAIPQ13075 1403 aa24.69■■□□□ 1.54
TRIM33-202ENST00000369543 MYT1LQ9UL68 1186 aa24.67■■□□□ 1.54
TRIM33-202ENST00000369543 PTPN23Q9H3S7 1636 aa24.67■■□□□ 1.54
TRIM33-202ENST00000369543 LRRIQ1Q96JM4 1722 aa24.66■■□□□ 1.54
TRIM33-202ENST00000369543 C11orf95C9JLR9 678 aaPredicted RBP24.66■■□□□ 1.54
TRIM33-202ENST00000369543 MPHOSPH9Q99550 1183 aa24.66■■□□□ 1.54
TRIM33-202ENST00000369543 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
TRIM33-202ENST00000369543 JPH4Q96JJ6 628 aa24.64■■□□□ 1.54
TRIM33-202ENST00000369543 FANCIQ9NVI1 1328 aa24.64■■□□□ 1.54
TRIM33-202ENST00000369543 PRKRIP1Q9H875 184 aaPredicted RBP24.63■■□□□ 1.53
TRIM33-202ENST00000369543 SAMD9Q5K651 1589 aa24.62■■□□□ 1.53
TRIM33-202ENST00000369543 ABCA5Q8WWZ7 1642 aa24.61■■□□□ 1.53
TRIM33-202ENST00000369543 NBR1Q14596 966 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms