RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 EEA1Q15075 1411 aa14.77□□□□□ -0.04
SCNM1-202ENST00000368905 ABCC8Q09428 1581 aa14.77□□□□□ -0.05
SCNM1-202ENST00000368905 PKNOX2Q96KN3 472 aa14.76□□□□□ -0.05
SCNM1-202ENST00000368905 ADRA2BP18089 450 aa14.73□□□□□ -0.05
SCNM1-202ENST00000368905 WRNQ14191 1432 aaPredicted RBP eCLIP14.69□□□□□ -0.06
SCNM1-202ENST00000368905 NBR1Q14596 966 aa14.66□□□□□ -0.06
SCNM1-202ENST00000368905 PUS7Q96PZ0 661 aaKnown RBP14.64□□□□□ -0.07
SCNM1-202ENST00000368905 SOGA1O94964 1423 aa14.59□□□□□ -0.07
SCNM1-202ENST00000368905 TNIKQ9UKE5 1360 aa14.58□□□□□ -0.07
SCNM1-202ENST00000368905 NPM3O75607 178 aaKnown RBP14.58□□□□□ -0.08
SCNM1-202ENST00000368905 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.08
SCNM1-202ENST00000368905 GOLGA3Q08378 1498 aa14.55□□□□□ -0.08
SCNM1-202ENST00000368905 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
SCNM1-202ENST00000368905 ZEB1P37275 1124 aaPredicted RBP14.54□□□□□ -0.08
SCNM1-202ENST00000368905 FGD1P98174 961 aa14.53□□□□□ -0.08
SCNM1-202ENST00000368905 POLR3GLQ9BT43 218 aa14.53□□□□□ -0.08
SCNM1-202ENST00000368905 ZBTB7CA1YPR0 619 aa14.51□□□□□ -0.09
SCNM1-202ENST00000368905 BCCIPQ9P287 314 aaKnown RBP eCLIP14.51□□□□□ -0.09
SCNM1-202ENST00000368905 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
SCNM1-202ENST00000368905 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
SCNM1-202ENST00000368905 TOP2BQ02880 1626 aa14.5□□□□□ -0.09
SCNM1-202ENST00000368905 KIF21BO75037 1637 aa14.49□□□□□ -0.09
SCNM1-202ENST00000368905 RUSC2Q8N2Y8 1516 aa14.48□□□□□ -0.09
SCNM1-202ENST00000368905 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
SCNM1-202ENST00000368905 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
SCNM1-202ENST00000368905 CADPSQ9ULU8 1353 aa14.46□□□□□ -0.1
SCNM1-202ENST00000368905 PAXIP1Q6ZW49 1069 aaPredicted RBP14.44□□□□□ -0.1
SCNM1-202ENST00000368905 CFAP44Q96MT7 982 aa14.44□□□□□ -0.1
SCNM1-202ENST00000368905 NESP48681 1621 aa14.44□□□□□ -0.1
SCNM1-202ENST00000368905 CFTRP13569 1480 aa14.43□□□□□ -0.1
SCNM1-202ENST00000368905 ZNF326Q5BKZ1 582 aaKnown RBP14.41□□□□□ -0.1
SCNM1-202ENST00000368905 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.4□□□□□ -0.1
SCNM1-202ENST00000368905 PRDM2Q13029 1718 aa14.4□□□□□ -0.1
SCNM1-202ENST00000368905 RSPH4AQ5TD94 716 aa14.39□□□□□ -0.11
SCNM1-202ENST00000368905 CENPBP07199 599 aaPredicted RBP14.38□□□□□ -0.11
SCNM1-202ENST00000368905 ARID3AQ99856 593 aa14.36□□□□□ -0.11
SCNM1-202ENST00000368905 PDS5BQ9NTI5 1447 aa14.35□□□□□ -0.11
SCNM1-202ENST00000368905 TSHZ2Q9NRE2 1034 aa14.34□□□□□ -0.11
SCNM1-202ENST00000368905 ERICH3Q5RHP9 1530 aa14.33□□□□□ -0.12
SCNM1-202ENST00000368905 NECTIN2Q92692 538 aa14.32□□□□□ -0.12
SCNM1-202ENST00000368905 CUX1P39880 1505 aa14.32□□□□□ -0.12
SCNM1-202ENST00000368905 CLIP1P30622 1438 aa14.32□□□□□ -0.12
SCNM1-202ENST00000368905 PPARGC1BQ86YN6 1023 aaKnown RBP14.31□□□□□ -0.12
SCNM1-202ENST00000368905 KIF27Q86VH2 1401 aa14.31□□□□□ -0.12
SCNM1-202ENST00000368905 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
SCNM1-202ENST00000368905 KIF21AQ7Z4S6 1674 aa14.31□□□□□ -0.12
SCNM1-202ENST00000368905 FANCD2Q9BXW9 1451 aa14.3□□□□□ -0.12
SCNM1-202ENST00000368905 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.3□□□□□ -0.12
SCNM1-202ENST00000368905 RAPGEF2Q9Y4G8 1499 aa14.29□□□□□ -0.12
SCNM1-202ENST00000368905 BBXQ8WY36 941 aaPredicted RBP14.28□□□□□ -0.12
SCNM1-202ENST00000368905 PRXQ9BXM0 1461 aa14.27□□□□□ -0.12
SCNM1-202ENST00000368905 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
SCNM1-202ENST00000368905 VPS8Q8N3P4 1428 aa14.25□□□□□ -0.13
SCNM1-202ENST00000368905 CCDC136Q96JN2 1154 aa14.2□□□□□ -0.14
SCNM1-202ENST00000368905 MRC2Q9UBG0 1479 aa14.19□□□□□ -0.14
SCNM1-202ENST00000368905 TICAM2Q86XR7 235 aa14.19□□□□□ -0.14
SCNM1-202ENST00000368905 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
SCNM1-202ENST00000368905 CCER1Q8TC90 406 aaPredicted RBP14.17□□□□□ -0.14
SCNM1-202ENST00000368905 ANO8Q9HCE9 1232 aaPredicted RBP14.17□□□□□ -0.14
SCNM1-202ENST00000368905 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.16□□□□□ -0.14
SCNM1-202ENST00000368905 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
SCNM1-202ENST00000368905 RSPH6AQ9H0K4 717 aa14.15□□□□□ -0.14
SCNM1-202ENST00000368905 CUX2O14529 1486 aa14.13□□□□□ -0.15
SCNM1-202ENST00000368905 WDR62O43379 1518 aa14.13□□□□□ -0.15
SCNM1-202ENST00000368905 URB2Q14146 1524 aaKnown RBP14.13□□□□□ -0.15
SCNM1-202ENST00000368905 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
SCNM1-202ENST00000368905 ZMYND15Q9H091 742 aa14.13□□□□□ -0.15
SCNM1-202ENST00000368905 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
SCNM1-202ENST00000368905 NAP1L5Q96NT1 182 aaPredicted RBP14.12□□□□□ -0.15
SCNM1-202ENST00000368905 BRPF1P55201 1214 aaPredicted RBP14.12□□□□□ -0.15
SCNM1-202ENST00000368905 CLSTN1O94985 981 aa14.11□□□□□ -0.15
SCNM1-202ENST00000368905 IRX6P78412 446 aaPredicted RBP14.1□□□□□ -0.15
SCNM1-202ENST00000368905 TOPBP1Q92547 1522 aa14.1□□□□□ -0.15
SCNM1-202ENST00000368905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.1□□□□□ -0.15
SCNM1-202ENST00000368905 ZNF592Q92610 1267 aa14.1□□□□□ -0.15
SCNM1-202ENST00000368905 RAD21O60216 631 aa14.09□□□□□ -0.15
SCNM1-202ENST00000368905 KCTD17Q8N5Z5 321 aa14.09□□□□□ -0.15
SCNM1-202ENST00000368905 IGF1RP08069 1367 aa14.09□□□□□ -0.15
SCNM1-202ENST00000368905 AAMPQ13685 434 aa14.08□□□□□ -0.15
SCNM1-202ENST00000368905 DNAJC5Q9H3Z4 198 aa14.08□□□□□ -0.15
SCNM1-202ENST00000368905 NPM1P06748 294 aaKnown RBP eCLIP14.08□□□□□ -0.16
SCNM1-202ENST00000368905 BRPF3Q9ULD4 1205 aa14.08□□□□□ -0.16
SCNM1-202ENST00000368905 C1orf115Q9H7X2 142 aa14.07□□□□□ -0.16
SCNM1-202ENST00000368905 ARAP1Q96P48 1450 aa14.07□□□□□ -0.16
SCNM1-202ENST00000368905 PPP4R3CPQ6ZMV5 832 aa14.05□□□□□ -0.16
SCNM1-202ENST00000368905 PSMD1Q99460 953 aa14.05□□□□□ -0.16
SCNM1-202ENST00000368905 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
SCNM1-202ENST00000368905 ZFP91Q96JP5 570 aaPredicted RBP14.05□□□□□ -0.16
SCNM1-202ENST00000368905 RGS22Q8NE09 1264 aa14.04□□□□□ -0.16
SCNM1-202ENST00000368905 A0A0U1RQG5 324 aaPredicted RBP14.03□□□□□ -0.16
SCNM1-202ENST00000368905 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
SCNM1-202ENST00000368905 PKD2Q13563 968 aa14.03□□□□□ -0.16
SCNM1-202ENST00000368905 SPRYD3Q8NCJ5 442 aa14.01□□□□□ -0.17
SCNM1-202ENST00000368905 ZNF692Q9BU19 519 aaPredicted RBP14.01□□□□□ -0.17
SCNM1-202ENST00000368905 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
SCNM1-202ENST00000368905 ZNF428Q96B54 188 aa14□□□□□ -0.17
SCNM1-202ENST00000368905 ARHGAP35Q9NRY4 1499 aa13.99□□□□□ -0.17
SCNM1-202ENST00000368905 RBM25P49756 843 aaKnown RBP13.98□□□□□ -0.17
SCNM1-202ENST00000368905 CUL7Q14999 1698 aa13.98□□□□□ -0.17
SCNM1-202ENST00000368905 MTMR7Q9Y216 660 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms