RNA–Protein interactions for RNA: ENST00000367669.7

RFWD2-204, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFWD2, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-204ENST00000367669 FHOD3Q2V2M9 1422 aa24.01■■□□□ 1.43
RFWD2-204ENST00000367669 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
RFWD2-204ENST00000367669 PRDM2Q13029 1718 aa23.9■■□□□ 1.42
RFWD2-204ENST00000367669 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
RFWD2-204ENST00000367669 PHLDB1Q86UU1 1377 aa23.9■■□□□ 1.42
RFWD2-204ENST00000367669 SIN3AQ96ST3 1273 aa23.89■■□□□ 1.42
RFWD2-204ENST00000367669 RAB3GAP2Q9H2M9 1393 aa23.87■■□□□ 1.41
RFWD2-204ENST00000367669 RRBP1Q9P2E9 1410 aaKnown RBP23.87■■□□□ 1.41
RFWD2-204ENST00000367669 HIRIP3Q9BW71 556 aaPredicted RBP23.86■■□□□ 1.41
RFWD2-204ENST00000367669 TIAM1Q13009 1591 aa23.79■■□□□ 1.4
RFWD2-204ENST00000367669 DNMBPQ6XZF7 1577 aa23.79■■□□□ 1.4
RFWD2-204ENST00000367669 LRRC9Q6ZRR7 1453 aa23.78■■□□□ 1.4
RFWD2-204ENST00000367669 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
RFWD2-204ENST00000367669 PCF11O94913 1555 aaKnown RBP23.76■■□□□ 1.39
RFWD2-204ENST00000367669 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
RFWD2-204ENST00000367669 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
RFWD2-204ENST00000367669 CHIC2Q9UKJ5 165 aa23.69■■□□□ 1.38
RFWD2-204ENST00000367669 MTUS2Q5JR59 1369 aa23.68■■□□□ 1.38
RFWD2-204ENST00000367669 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
RFWD2-204ENST00000367669 CLSPNQ9HAW4 1339 aa23.65■■□□□ 1.38
RFWD2-204ENST00000367669 KCNH8Q96L42 1107 aa23.64■■□□□ 1.38
RFWD2-204ENST00000367669 GAPVD1Q14C86 1478 aa23.64■■□□□ 1.37
RFWD2-204ENST00000367669 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.371e-7■■■■□ 21.1
RFWD2-204ENST00000367669 PDS5BQ9NTI5 1447 aa23.61■■□□□ 1.37
RFWD2-204ENST00000367669 DDX10Q13206 875 aaKnown RBP23.6■■□□□ 1.37
RFWD2-204ENST00000367669 RRP7BPQ9NSQ0 103 aa23.59■■□□□ 1.37
RFWD2-204ENST00000367669 FBLN2P98095 1184 aa23.55■■□□□ 1.36
RFWD2-204ENST00000367669 KIF21AQ7Z4S6 1674 aa23.54■■□□□ 1.36
RFWD2-204ENST00000367669 MAPKBP1O60336 1514 aa23.54■■□□□ 1.36
RFWD2-204ENST00000367669 LAMC3Q9Y6N6 1575 aa23.53■■□□□ 1.36
RFWD2-204ENST00000367669 CASKIN1Q8WXD9 1431 aa23.52■■□□□ 1.36
RFWD2-204ENST00000367669 FMN1Q68DA7 1419 aa23.5■■□□□ 1.35
RFWD2-204ENST00000367669 TRIM52Q96A61 297 aa23.49■■□□□ 1.35
RFWD2-204ENST00000367669 FYCO1Q9BQS8 1478 aa23.49■■□□□ 1.35
RFWD2-204ENST00000367669 CUL7Q14999 1698 aa23.47■■□□□ 1.35
RFWD2-204ENST00000367669 CTTNBP2Q8WZ74 1663 aa23.47■■□□□ 1.35
RFWD2-204ENST00000367669 FGD6Q6ZV73 1430 aa23.45■■□□□ 1.34
RFWD2-204ENST00000367669 MAP3K1Q13233 1512 aa23.44■■□□□ 1.34
RFWD2-204ENST00000367669 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
RFWD2-204ENST00000367669 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
RFWD2-204ENST00000367669 PTPRKQ15262 1439 aa23.43■■□□□ 1.34
RFWD2-204ENST00000367669 EFCAB5A4FU69 1503 aa23.42■■□□□ 1.34
RFWD2-204ENST00000367669 FOXD1Q16676 465 aa23.41■■□□□ 1.34
RFWD2-204ENST00000367669 SNAPC4Q5SXM2 1469 aa23.39■■□□□ 1.34
RFWD2-204ENST00000367669 NCOA2Q15596 1464 aa23.38■■□□□ 1.33
RFWD2-204ENST00000367669 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
RFWD2-204ENST00000367669 ZNF608Q9ULD9 1512 aaPredicted RBP23.36■■□□□ 1.33
RFWD2-204ENST00000367669 TONSLQ96HA7 1378 aa23.36■■□□□ 1.33
RFWD2-204ENST00000367669 PPP1R15AO75807 674 aaPredicted RBP23.33■■□□□ 1.32
RFWD2-204ENST00000367669 CCDC18Q5T9S5 1454 aa23.32■■□□□ 1.32
RFWD2-204ENST00000367669 CDK13Q14004 1512 aaKnown RBP23.31■■□□□ 1.32
RFWD2-204ENST00000367669 LRRIQ1Q96JM4 1722 aa23.31■■□□□ 1.32
RFWD2-204ENST00000367669 ZNF777Q9ULD5 760 aaPredicted RBP23.3■■□□□ 1.32
RFWD2-204ENST00000367669 ZNF644Q9H582 1327 aaPredicted RBP23.29■■□□□ 1.32
RFWD2-204ENST00000367669 CNGB1Q14028 1251 aaPredicted RBP23.28■■□□□ 1.32
RFWD2-204ENST00000367669 BCANQ96GW7 911 aa23.28■■□□□ 1.32
RFWD2-204ENST00000367669 MYOM3Q5VTT5 1437 aa23.28■■□□□ 1.32
RFWD2-204ENST00000367669 MAGI3Q5TCQ9 1506 aa23.27■■□□□ 1.32
RFWD2-204ENST00000367669 TARBP1Q13395 1621 aaKnown RBP23.27■■□□□ 1.31
RFWD2-204ENST00000367669 GRIN2BQ13224 1484 aa23.26■■□□□ 1.31
RFWD2-204ENST00000367669 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
RFWD2-204ENST00000367669 PELP1Q8IZL8 1130 aaKnown RBP23.22■■□□□ 1.31
RFWD2-204ENST00000367669 SAMD9Q5K651 1589 aa23.22■■□□□ 1.31
RFWD2-204ENST00000367669 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.31
RFWD2-204ENST00000367669 NAIPQ13075 1403 aa23.2■■□□□ 1.31
RFWD2-204ENST00000367669 ERCC6Q03468 1493 aa23.2■■□□□ 1.3
RFWD2-204ENST00000367669 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
RFWD2-204ENST00000367669 IQGAP2Q13576 1575 aa23.16■■□□□ 1.3
RFWD2-204ENST00000367669 HFM1A2PYH4 1435 aa23.16■■□□□ 1.3
RFWD2-204ENST00000367669 SUPT6HQ7KZ85 1726 aaKnown RBP23.15■■□□□ 1.3
RFWD2-204ENST00000367669 EPRSP07814 1512 aaKnown RBP23.15■■□□□ 1.3
RFWD2-204ENST00000367669 ANP32CO43423 234 aa23.14■■□□□ 1.29
RFWD2-204ENST00000367669 SUPT16HQ9Y5B9 1047 aaKnown RBP23.14■■□□□ 1.29
RFWD2-204ENST00000367669 PTPN23Q9H3S7 1636 aa23.14■■□□□ 1.29
RFWD2-204ENST00000367669 UACAQ9BZF9 1416 aa23.13■■□□□ 1.29
RFWD2-204ENST00000367669 THOC2Q8NI27 1593 aaKnown RBP23.12■■□□□ 1.29
RFWD2-204ENST00000367669 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
RFWD2-204ENST00000367669 EHBP1L1Q8N3D4 1523 aa23.11■■□□□ 1.29
RFWD2-204ENST00000367669 MPHOSPH9Q99550 1183 aa23.1■■□□□ 1.29
RFWD2-204ENST00000367669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.09■■□□□ 1.29
RFWD2-204ENST00000367669 POLR3GLQ9BT43 218 aa23.09■■□□□ 1.29
RFWD2-204ENST00000367669 ADAMTS12P58397 1594 aa23.09■■□□□ 1.29
RFWD2-204ENST00000367669 UGGT2Q9NYU1 1516 aa23.07■■□□□ 1.28
RFWD2-204ENST00000367669 KDM6BO15054 1643 aa23.06■■□□□ 1.28
RFWD2-204ENST00000367669 L3MBTL2Q969R5 705 aa23.04■■□□□ 1.28
RFWD2-204ENST00000367669 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
RFWD2-204ENST00000367669 HSPA5P11021 654 aaKnown RBP23.04■■□□□ 1.28
RFWD2-204ENST00000367669 PLPPR3Q6T4P5 718 aa23.04■■□□□ 1.28
RFWD2-204ENST00000367669 HECW1Q76N89 1606 aa23.03■■□□□ 1.28
RFWD2-204ENST00000367669 CFDP1Q9UEE9 299 aaPredicted RBP23.03■■□□□ 1.28
RFWD2-204ENST00000367669 TIMELESSQ9UNS1 1208 aa23.03■■□□□ 1.28
RFWD2-204ENST00000367669 PRG4Q92954 1404 aaPredicted RBP23.02■■□□□ 1.28
RFWD2-204ENST00000367669 FKBP8Q14318 412 aa23.01■■□□□ 1.27
RFWD2-204ENST00000367669 IFT140Q96RY7 1462 aa23■■□□□ 1.27
RFWD2-204ENST00000367669 CDK11AQ9UQ88 783 aaPredicted RBP23■■□□□ 1.27
RFWD2-204ENST00000367669 PLB1Q6P1J6 1458 aa22.99■■□□□ 1.27
RFWD2-204ENST00000367669 JPH4Q96JJ6 628 aa22.98■■□□□ 1.27
RFWD2-204ENST00000367669 SENP3-EIF4A1A0A087X0R7 540 aa22.98■■□□□ 1.27
RFWD2-204ENST00000367669 WDR62O43379 1518 aa22.96■■□□□ 1.27
RFWD2-204ENST00000367669 DISP1Q96F81 1524 aa22.95■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms