RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 CLEC11AQ9Y240 323 aa5.77□□□□□ -1.49
PTPRC-203ENST00000367367 TOP2AP11388 1531 aaKnown RBP5.74□□□□□ -1.49
PTPRC-203ENST00000367367 NESP48681 1621 aa5.72□□□□□ -1.49
PTPRC-203ENST00000367367 CLCN6P51797 869 aa5.72□□□□□ -1.49
PTPRC-203ENST00000367367 POTEB2H3BUK9 544 aa5.71□□□□□ -1.5
PTPRC-203ENST00000367367 ATF5Q9Y2D1 282 aaPredicted RBP5.71□□□□□ -1.5
PTPRC-203ENST00000367367 KIF21AQ7Z4S6 1674 aa5.71□□□□□ -1.5
PTPRC-203ENST00000367367 CHADLQ6NUI6 762 aa5.71□□□□□ -1.5
PTPRC-203ENST00000367367 FKBP8Q14318 412 aa5.7□□□□□ -1.5
PTPRC-203ENST00000367367 PRDM2Q13029 1718 aa5.7□□□□□ -1.5
PTPRC-203ENST00000367367 DCBLD2Q96PD2 775 aa5.69□□□□□ -1.5
PTPRC-203ENST00000367367 FOXD4L1Q9NU39 408 aa5.69□□□□□ -1.5
PTPRC-203ENST00000367367 LAMC3Q9Y6N6 1575 aa5.69□□□□□ -1.5
PTPRC-203ENST00000367367 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
PTPRC-203ENST00000367367 SPDYE1Q8NFV5 336 aaPredicted RBP5.68□□□□□ -1.5
PTPRC-203ENST00000367367 ERCC6Q03468 1493 aa5.67□□□□□ -1.5
PTPRC-203ENST00000367367 CCDC88BA6NC98 1476 aa5.65□□□□□ -1.5
PTPRC-203ENST00000367367 SUPT5HO00267 1087 aaKnown RBP5.65□□□□□ -1.51
PTPRC-203ENST00000367367 THOC2Q8NI27 1593 aaKnown RBP5.65□□□□□ -1.51
PTPRC-203ENST00000367367 CD44P16070 742 aaKnown RBP5.64□□□□□ -1.51
PTPRC-203ENST00000367367 CADPSQ9ULU8 1353 aa5.64□□□□□ -1.51
PTPRC-203ENST00000367367 SPDYE2BA6NHP3 402 aa5.63□□□□□ -1.51
PTPRC-203ENST00000367367 SPDYE6P0CI01 402 aa5.63□□□□□ -1.51
PTPRC-203ENST00000367367 SPDYE2Q495Y8 402 aa5.63□□□□□ -1.51
PTPRC-203ENST00000367367 CFTRP13569 1480 aa5.62□□□□□ -1.51
PTPRC-203ENST00000367367 PDS5BQ9NTI5 1447 aa5.61□□□□□ -1.51
PTPRC-203ENST00000367367 FANCD2Q9BXW9 1451 aa5.61□□□□□ -1.51
PTPRC-203ENST00000367367 CEP164Q9UPV0 1460 aa5.6□□□□□ -1.51
PTPRC-203ENST00000367367 CUX2O14529 1486 aa5.58□□□□□ -1.52
PTPRC-203ENST00000367367 MRC2Q9UBG0 1479 aa5.58□□□□□ -1.52
PTPRC-203ENST00000367367 PLCB2Q00722 1185 aa5.58□□□□□ -1.52
PTPRC-203ENST00000367367 WDR62O43379 1518 aa5.58□□□□□ -1.52
PTPRC-203ENST00000367367 TAOK2Q9UL54 1235 aa5.57□□□□□ -1.52
PTPRC-203ENST00000367367 FAM163AQ96GL9 167 aaPredicted RBP5.56□□□□□ -1.52
PTPRC-203ENST00000367367 URB2Q14146 1524 aaKnown RBP5.56□□□□□ -1.52
PTPRC-203ENST00000367367 PRR29P0C7W0 189 aa5.55□□□□□ -1.52
PTPRC-203ENST00000367367 CDAN1Q8IWY9 1227 aa5.55□□□□□ -1.52
PTPRC-203ENST00000367367 DNMBPQ6XZF7 1577 aa5.53□□□□□ -1.52
PTPRC-203ENST00000367367 TOPBP1Q92547 1522 aa5.52□□□□□ -1.53
PTPRC-203ENST00000367367 MMRN1Q13201 1228 aa5.52□□□□□ -1.53
PTPRC-203ENST00000367367 FARP1Q9Y4F1 1045 aaPredicted RBP5.52□□□□□ -1.53
PTPRC-203ENST00000367367 ZNF692Q9BU19 519 aaPredicted RBP5.51□□□□□ -1.53
PTPRC-203ENST00000367367 POTEJP0CG39 1038 aa5.51□□□□□ -1.53
PTPRC-203ENST00000367367 FBLN2P98095 1184 aa5.51□□□□□ -1.53
PTPRC-203ENST00000367367 ZNF579Q8NAF0 562 aaKnown RBP5.51□□□□□ -1.53
PTPRC-203ENST00000367367 GALR2O43603 387 aaPredicted RBP5.5□□□□□ -1.53
PTPRC-203ENST00000367367 ABCC8Q09428 1581 aa5.5□□□□□ -1.53
PTPRC-203ENST00000367367 CUX1P39880 1505 aa5.5□□□□□ -1.53
PTPRC-203ENST00000367367 TIMELESSQ9UNS1 1208 aa5.49□□□□□ -1.53
PTPRC-203ENST00000367367 MAMSTRQ6ZN01 415 aa5.49□□□□□ -1.53
PTPRC-203ENST00000367367 ZRANB1Q9UGI0 708 aa5.49□□□□□ -1.53
PTPRC-203ENST00000367367 SSUH2Q9Y2M2 353 aa5.49□□□□□ -1.53
PTPRC-203ENST00000367367 POLA1P09884 1462 aaPredicted RBP5.48□□□□□ -1.53
PTPRC-203ENST00000367367 TARBP1Q13395 1621 aaKnown RBP5.48□□□□□ -1.53
PTPRC-203ENST00000367367 KDM2AQ9Y2K7 1162 aa5.48□□□□□ -1.53
PTPRC-203ENST00000367367 SYNJ1O43426 1573 aa5.48□□□□□ -1.53
PTPRC-203ENST00000367367 EIF4G3O43432 1585 aaKnown RBP5.48□□□□□ -1.53
PTPRC-203ENST00000367367 WDR97A6NE52 1622 aa5.48□□□□□ -1.53
PTPRC-203ENST00000367367 BIVM-ERCC5R4GMW8 1640 aa5.48□□□□□ -1.53
PTPRC-203ENST00000367367 TPRNQ4KMQ1 711 aa5.48□□□□□ -1.53
PTPRC-203ENST00000367367 FGD5Q6ZNL6 1462 aa5.47□□□□□ -1.53
PTPRC-203ENST00000367367 HAP1P54257 671 aaPredicted RBP5.47□□□□□ -1.53
PTPRC-203ENST00000367367 ZNF608Q9ULD9 1512 aaPredicted RBP5.47□□□□□ -1.53
PTPRC-203ENST00000367367 TOP2BQ02880 1626 aa5.46□□□□□ -1.54
PTPRC-203ENST00000367367 IFT140Q96RY7 1462 aa5.46□□□□□ -1.54
PTPRC-203ENST00000367367 RAD54L2Q9Y4B4 1467 aa5.46□□□□□ -1.54
PTPRC-203ENST00000367367 WRNQ14191 1432 aaPredicted RBP eCLIP5.45□□□□□ -1.549e-6■■■■■ 50.1
PTPRC-203ENST00000367367 PBRM1Q86U86 1689 aa5.45□□□□□ -1.54
PTPRC-203ENST00000367367 SPNS2Q8IVW8 549 aa5.45□□□□□ -1.54
PTPRC-203ENST00000367367 PELP1Q8IZL8 1130 aaKnown RBP5.45□□□□□ -1.54
PTPRC-203ENST00000367367 CHD1O14646 1710 aa5.44□□□□□ -1.54
PTPRC-203ENST00000367367 BCANQ96GW7 911 aa5.43□□□□□ -1.54
PTPRC-203ENST00000367367 AQRO60306 1485 aaKnown RBP eCLIP5.43□□□□□ -1.545e-7■■■■■ 27.7
PTPRC-203ENST00000367367 SOGA1O94964 1423 aa5.43□□□□□ -1.54
PTPRC-203ENST00000367367 ABCA5Q8WWZ7 1642 aa5.42□□□□□ -1.54
PTPRC-203ENST00000367367 DNAJC5Q9H3Z4 198 aa5.41□□□□□ -1.54
PTPRC-203ENST00000367367 TDRD9Q8NDG6 1382 aaKnown RBP5.41□□□□□ -1.54
PTPRC-203ENST00000367367 METRNQ9UJH8 293 aa5.41□□□□□ -1.54
PTPRC-203ENST00000367367 ABCA10Q8WWZ4 1543 aa5.4□□□□□ -1.54
PTPRC-203ENST00000367367 MKRN4PQ13434 485 aaPredicted RBP5.4□□□□□ -1.55
PTPRC-203ENST00000367367 SCUBE2Q9NQ36 999 aa5.4□□□□□ -1.55
PTPRC-203ENST00000367367 SNAPC4Q5SXM2 1469 aa5.39□□□□□ -1.55
PTPRC-203ENST00000367367 TULP1O00294 542 aaPredicted RBP5.39□□□□□ -1.55
PTPRC-203ENST00000367367 GAPVD1Q14C86 1478 aa5.38□□□□□ -1.55
PTPRC-203ENST00000367367 C7P10643 843 aa5.37□□□□□ -1.55
PTPRC-203ENST00000367367 PHF12Q96QT6 1004 aa5.37□□□□□ -1.55
PTPRC-203ENST00000367367 GRIN2BQ13224 1484 aa5.37□□□□□ -1.55
PTPRC-203ENST00000367367 SLC39A7Q92504 469 aa5.36□□□□□ -1.55
PTPRC-203ENST00000367367 MAGI1Q96QZ7 1491 aaPredicted RBP5.36□□□□□ -1.55
PTPRC-203ENST00000367367 ADAMTS12P58397 1594 aa5.36□□□□□ -1.55
PTPRC-203ENST00000367367 PKD2Q13563 968 aa5.35□□□□□ -1.55
PTPRC-203ENST00000367367 SYNJ2O15056 1496 aa5.34□□□□□ -1.55
PTPRC-203ENST00000367367 ERICH3Q5RHP9 1530 aa5.34□□□□□ -1.55
PTPRC-203ENST00000367367 NPM1P06748 294 aaKnown RBP eCLIP5.34□□□□□ -1.56
PTPRC-203ENST00000367367 ASTLQ6HA08 431 aaPredicted RBP5.34□□□□□ -1.56
PTPRC-203ENST00000367367 DAXXQ9UER7 740 aaPredicted RBP5.34□□□□□ -1.56
PTPRC-203ENST00000367367 ATXN8OSP0DMR3 200 aa5.33□□□□□ -1.56
PTPRC-203ENST00000367367 CUL7Q14999 1698 aa5.33□□□□□ -1.56
PTPRC-203ENST00000367367 RIMBP3CA6NJZ7 1639 aa5.32□□□□□ -1.56
PTPRC-203ENST00000367367 RIMBP3BA6NNM3 1639 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms