RNA–Protein interactions for RNA: ENST00000366981.8

ATF3-203, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-203ENST00000366981 ARHGEF11O15085 1522 aa11.93□□□□□ -0.5
ATF3-203ENST00000366981 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
ATF3-203ENST00000366981 RAD54L2Q9Y4B4 1467 aa11.9□□□□□ -0.5
ATF3-203ENST00000366981 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
ATF3-203ENST00000366981 IGF1RP08069 1367 aa11.89□□□□□ -0.51
ATF3-203ENST00000366981 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
ATF3-203ENST00000366981 CUL7Q14999 1698 aa11.87□□□□□ -0.51
ATF3-203ENST00000366981 SCAF1Q9H7N4 1312 aaKnown RBP11.87□□□□□ -0.51
ATF3-203ENST00000366981 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
ATF3-203ENST00000366981 CEP162Q5TB80 1403 aa11.82□□□□□ -0.52
ATF3-203ENST00000366981 IFT140Q96RY7 1462 aa11.82□□□□□ -0.52
ATF3-203ENST00000366981 GAPVD1Q14C86 1478 aa11.8□□□□□ -0.52
ATF3-203ENST00000366981 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
ATF3-203ENST00000366981 ARAP1Q96P48 1450 aa11.79□□□□□ -0.52
ATF3-203ENST00000366981 CYB5RLQ6IPT4 315 aa11.79□□□□□ -0.52
ATF3-203ENST00000366981 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
ATF3-203ENST00000366981 CTTNBP2Q8WZ74 1663 aa11.75□□□□□ -0.53
ATF3-203ENST00000366981 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
ATF3-203ENST00000366981 ZNF608Q9ULD9 1512 aaPredicted RBP11.75□□□□□ -0.53
ATF3-203ENST00000366981 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
ATF3-203ENST00000366981 EIF4G3O43432 1585 aaKnown RBP11.74□□□□□ -0.53
ATF3-203ENST00000366981 ADAMTS12P58397 1594 aa11.74□□□□□ -0.53
ATF3-203ENST00000366981 UBTFP17480 764 aaKnown RBP11.73□□□□□ -0.53
ATF3-203ENST00000366981 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
ATF3-203ENST00000366981 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
ATF3-203ENST00000366981 CLIP1P30622 1438 aa11.72□□□□□ -0.53
ATF3-203ENST00000366981 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.548e-7■□□□□ 9.1
ATF3-203ENST00000366981 FHAD1B1AJZ9 1412 aa11.69□□□□□ -0.54
ATF3-203ENST00000366981 ARHGAP35Q9NRY4 1499 aa11.67□□□□□ -0.54
ATF3-203ENST00000366981 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
ATF3-203ENST00000366981 MAGI1Q96QZ7 1491 aaPredicted RBP11.65□□□□□ -0.54
ATF3-203ENST00000366981 EFCAB5A4FU69 1503 aa11.65□□□□□ -0.55
ATF3-203ENST00000366981 SAMD9Q5K651 1589 aa11.64□□□□□ -0.55
ATF3-203ENST00000366981 SNAPC4Q5SXM2 1469 aa11.61□□□□□ -0.55
ATF3-203ENST00000366981 SYNJ2O15056 1496 aa11.59□□□□□ -0.55
ATF3-203ENST00000366981 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
ATF3-203ENST00000366981 IQGAP2Q13576 1575 aa11.58□□□□□ -0.56
ATF3-203ENST00000366981 CHD1O14646 1710 aa11.57□□□□□ -0.56
ATF3-203ENST00000366981 MAP3K1Q13233 1512 aa11.56□□□□□ -0.56
ATF3-203ENST00000366981 CLASP1Q7Z460 1538 aa11.56□□□□□ -0.56
ATF3-203ENST00000366981 UGGT2Q9NYU1 1516 aa11.56□□□□□ -0.56
ATF3-203ENST00000366981 KIAA0586Q9BVV6 1533 aa11.55□□□□□ -0.56
ATF3-203ENST00000366981 NUP160Q12769 1436 aa11.55□□□□□ -0.56
ATF3-203ENST00000366981 CEP170Q5SW79 1584 aa11.54□□□□□ -0.56
ATF3-203ENST00000366981 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
ATF3-203ENST00000366981 TRIM26Q12899 539 aaPredicted RBP11.53□□□□□ -0.56
ATF3-203ENST00000366981 CFAP43Q8NDM7 1665 aa11.52□□□□□ -0.57
ATF3-203ENST00000366981 CACNB1Q02641 598 aaPredicted RBP11.51□□□□□ -0.57
ATF3-203ENST00000366981 PCF11O94913 1555 aaKnown RBP11.5□□□□□ -0.57
ATF3-203ENST00000366981 FBLN2P98095 1184 aa11.49□□□□□ -0.57
ATF3-203ENST00000366981 TIAM1Q13009 1591 aa11.49□□□□□ -0.57
ATF3-203ENST00000366981 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
ATF3-203ENST00000366981 CASKIN1Q8WXD9 1431 aa11.48□□□□□ -0.57
ATF3-203ENST00000366981 FYCO1Q9BQS8 1478 aa11.48□□□□□ -0.57
ATF3-203ENST00000366981 KIAA0556O60303 1618 aa11.48□□□□□ -0.57
ATF3-203ENST00000366981 DISP1Q96F81 1524 aa11.47□□□□□ -0.57
ATF3-203ENST00000366981 FHOD3Q2V2M9 1422 aa11.47□□□□□ -0.57
ATF3-203ENST00000366981 FMN1Q68DA7 1419 aa11.47□□□□□ -0.57
ATF3-203ENST00000366981 SHROOM2Q13796 1616 aa11.46□□□□□ -0.58
ATF3-203ENST00000366981 ILDR1Q86SU0 546 aaPredicted RBP11.45□□□□□ -0.58
ATF3-203ENST00000366981 PCGF6Q9BYE7 350 aa11.43□□□□□ -0.58
ATF3-203ENST00000366981 RANGAP1P46060 587 aaPredicted RBP11.42□□□□□ -0.58
ATF3-203ENST00000366981 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
ATF3-203ENST00000366981 LRRC9Q6ZRR7 1453 aa11.4□□□□□ -0.58
ATF3-203ENST00000366981 HECW1Q76N89 1606 aa11.39□□□□□ -0.59
ATF3-203ENST00000366981 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
ATF3-203ENST00000366981 KANK4Q5T7N3 995 aaPredicted RBP11.37□□□□□ -0.59
ATF3-203ENST00000366981 RRBP1Q9P2E9 1410 aaKnown RBP11.36□□□□□ -0.59
ATF3-203ENST00000366981 RAPGEF6Q8TEU7 1601 aa11.36□□□□□ -0.59
ATF3-203ENST00000366981 APLP2Q06481 763 aa11.36□□□□□ -0.59
ATF3-203ENST00000366981 FKBP8Q14318 412 aa11.36□□□□□ -0.59
ATF3-203ENST00000366981 CCDC18Q5T9S5 1454 aa11.36□□□□□ -0.59
ATF3-203ENST00000366981 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
ATF3-203ENST00000366981 P3H3Q8IVL6 736 aa11.35□□□□□ -0.59
ATF3-203ENST00000366981 ABCA8O94911 1581 aa11.33□□□□□ -0.6
ATF3-203ENST00000366981 JPH4Q96JJ6 628 aa11.33□□□□□ -0.6
ATF3-203ENST00000366981 EPRSP07814 1512 aaKnown RBP11.33□□□□□ -0.6
ATF3-203ENST00000366981 CARMIL2Q6F5E8 1435 aa11.33□□□□□ -0.6
ATF3-203ENST00000366981 EHBP1L1Q8N3D4 1523 aa11.32□□□□□ -0.6
ATF3-203ENST00000366981 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
ATF3-203ENST00000366981 NUP153P49790 1475 aaKnown RBP11.32□□□□□ -0.6
ATF3-203ENST00000366981 MAGI3Q5TCQ9 1506 aa11.31□□□□□ -0.6
ATF3-203ENST00000366981 KDM4FA0A1W2PPD8 638 aa11.3□□□□□ -0.6
ATF3-203ENST00000366981 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
ATF3-203ENST00000366981 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
ATF3-203ENST00000366981 ERCC6L2Q5T890 1561 aa11.28□□□□□ -0.6
ATF3-203ENST00000366981 PRG4Q92954 1404 aaPredicted RBP11.28□□□□□ -0.6
ATF3-203ENST00000366981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.66e-7■□□□□ 11.3
ATF3-203ENST00000366981 ADCY10Q96PN6 1610 aa11.27□□□□□ -0.6
ATF3-203ENST00000366981 PHLDB1Q86UU1 1377 aa11.26□□□□□ -0.61
ATF3-203ENST00000366981 PLB1Q6P1J6 1458 aa11.25□□□□□ -0.61
ATF3-203ENST00000366981 CDK13Q14004 1512 aaKnown RBP11.25□□□□□ -0.61
ATF3-203ENST00000366981 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
ATF3-203ENST00000366981 KIF13AQ9H1H9 1805 aa11.25□□□□□ -0.61
ATF3-203ENST00000366981 CCNB3Q8WWL7 1395 aa11.24□□□□□ -0.61
ATF3-203ENST00000366981 NCOA2Q15596 1464 aa11.24□□□□□ -0.61
ATF3-203ENST00000366981 ABCC10Q5T3U5 1492 aa11.23□□□□□ -0.61
ATF3-203ENST00000366981 UHRF1BP1LA0JNW5 1464 aa11.21□□□□□ -0.61
ATF3-203ENST00000366981 MTUS2Q5JR59 1369 aa11.21□□□□□ -0.61
ATF3-203ENST00000366981 TTBK1Q5TCY1 1321 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms