RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 SUPT5HO00267 1087 aaKnown RBP20.09■□□□□ 0.81
H3F3A-203ENST00000366815 OSCARQ8IYS5 282 aa20.09■□□□□ 0.81
H3F3A-203ENST00000366815 CUX1P39880 1505 aa20.04■□□□□ 0.8
H3F3A-203ENST00000366815 AQRO60306 1485 aaKnown RBP eCLIP20.02■□□□□ 0.83e-10■■■■□ 25
H3F3A-203ENST00000366815 RAD54L2Q9Y4B4 1467 aa20.02■□□□□ 0.8
H3F3A-203ENST00000366815 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
H3F3A-203ENST00000366815 SOGA1O94964 1423 aa20■□□□□ 0.79
H3F3A-203ENST00000366815 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
H3F3A-203ENST00000366815 ATF5Q9Y2D1 282 aaPredicted RBP19.97■□□□□ 0.79
H3F3A-203ENST00000366815 CHD1O14646 1710 aa19.96■□□□□ 0.79
H3F3A-203ENST00000366815 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
H3F3A-203ENST00000366815 POTEHQ6S545 545 aa19.93■□□□□ 0.78
H3F3A-203ENST00000366815 RBM42Q9BTD8 480 aaKnown RBP19.92■□□□□ 0.78
H3F3A-203ENST00000366815 TDRD9Q8NDG6 1382 aaKnown RBP19.92■□□□□ 0.78
H3F3A-203ENST00000366815 RIMBP3CA6NJZ7 1639 aa19.89■□□□□ 0.77
H3F3A-203ENST00000366815 RIMBP3BA6NNM3 1639 aa19.89■□□□□ 0.77
H3F3A-203ENST00000366815 RIMBP3Q9UFD9 1639 aa19.89■□□□□ 0.77
H3F3A-203ENST00000366815 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
H3F3A-203ENST00000366815 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
H3F3A-203ENST00000366815 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
H3F3A-203ENST00000366815 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
H3F3A-203ENST00000366815 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
H3F3A-203ENST00000366815 MAGI1Q96QZ7 1491 aaPredicted RBP19.8■□□□□ 0.76
H3F3A-203ENST00000366815 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
H3F3A-203ENST00000366815 ABCA5Q8WWZ7 1642 aa19.8■□□□□ 0.76
H3F3A-203ENST00000366815 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
H3F3A-203ENST00000366815 FBLN2P98095 1184 aa19.78■□□□□ 0.76
H3F3A-203ENST00000366815 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
H3F3A-203ENST00000366815 SYNJ1O43426 1573 aa19.77■□□□□ 0.76
H3F3A-203ENST00000366815 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
H3F3A-203ENST00000366815 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
H3F3A-203ENST00000366815 CLASP1Q7Z460 1538 aa19.73■□□□□ 0.75
H3F3A-203ENST00000366815 ZBTB12Q9Y330 459 aaPredicted RBP19.72■□□□□ 0.75
H3F3A-203ENST00000366815 CHMP7Q8WUX9 453 aaPredicted RBP19.69■□□□□ 0.74
H3F3A-203ENST00000366815 ARAP1Q96P48 1450 aa19.66■□□□□ 0.74
H3F3A-203ENST00000366815 ATXN8OSP0DMR3 200 aa19.63■□□□□ 0.73
H3F3A-203ENST00000366815 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
H3F3A-203ENST00000366815 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
H3F3A-203ENST00000366815 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
H3F3A-203ENST00000366815 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
H3F3A-203ENST00000366815 FHAD1B1AJZ9 1412 aa19.52■□□□□ 0.72
H3F3A-203ENST00000366815 CEP170Q5SW79 1584 aa19.52■□□□□ 0.71
H3F3A-203ENST00000366815 NUP160Q12769 1436 aa19.51■□□□□ 0.71
H3F3A-203ENST00000366815 CHRDL2Q6WN34 429 aa19.46■□□□□ 0.71
H3F3A-203ENST00000366815 AKT1S1Q96B36 256 aa19.45■□□□□ 0.7
H3F3A-203ENST00000366815 SHROOM2Q13796 1616 aa19.43■□□□□ 0.7
H3F3A-203ENST00000366815 ERCC6L2Q5T890 1561 aa19.43■□□□□ 0.7
H3F3A-203ENST00000366815 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
H3F3A-203ENST00000366815 RUSC2Q8N2Y8 1516 aa19.34■□□□□ 0.69
H3F3A-203ENST00000366815 IGF1RP08069 1367 aa19.33■□□□□ 0.69
H3F3A-203ENST00000366815 CUL7Q14999 1698 aa19.33■□□□□ 0.68
H3F3A-203ENST00000366815 PRG4Q92954 1404 aaPredicted RBP19.26■□□□□ 0.67
H3F3A-203ENST00000366815 REM2Q8IYK8 340 aaPredicted RBP19.26■□□□□ 0.67
H3F3A-203ENST00000366815 JPH4Q96JJ6 628 aa19.25■□□□□ 0.67
H3F3A-203ENST00000366815 KIAA0586Q9BVV6 1533 aa19.22■□□□□ 0.67
H3F3A-203ENST00000366815 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
H3F3A-203ENST00000366815 SPDYE2BA6NHP3 402 aa19.1■□□□□ 0.65
H3F3A-203ENST00000366815 SPDYE6P0CI01 402 aa19.1■□□□□ 0.65
H3F3A-203ENST00000366815 SPDYE2Q495Y8 402 aa19.1■□□□□ 0.65
H3F3A-203ENST00000366815 ADCY10Q96PN6 1610 aa19.07■□□□□ 0.64
H3F3A-203ENST00000366815 IQGAP2Q13576 1575 aa19.07■□□□□ 0.64
H3F3A-203ENST00000366815 KIF13AQ9H1H9 1805 aa19.05■□□□□ 0.64
H3F3A-203ENST00000366815 RAPGEF2Q9Y4G8 1499 aa19.05■□□□□ 0.64
H3F3A-203ENST00000366815 PITPNM1O00562 1244 aa19.05■□□□□ 0.64
H3F3A-203ENST00000366815 MKRN4PQ13434 485 aaPredicted RBP19.04■□□□□ 0.64
H3F3A-203ENST00000366815 MAPKBP1O60336 1514 aa19.01■□□□□ 0.63
H3F3A-203ENST00000366815 PIP4P2Q8N4L2 257 aa18.99■□□□□ 0.63
H3F3A-203ENST00000366815 CARMIL2Q6F5E8 1435 aa18.99■□□□□ 0.63
H3F3A-203ENST00000366815 DISP1Q96F81 1524 aa18.98■□□□□ 0.63
H3F3A-203ENST00000366815 PTPRGP23470 1445 aa18.98■□□□□ 0.63
H3F3A-203ENST00000366815 TNIKQ9UKE5 1360 aa18.97■□□□□ 0.63
H3F3A-203ENST00000366815 UGGT2Q9NYU1 1516 aa18.97■□□□□ 0.63
H3F3A-203ENST00000366815 ABCC10Q5T3U5 1492 aa18.95■□□□□ 0.62
H3F3A-203ENST00000366815 CTTNBP2Q8WZ74 1663 aa18.95■□□□□ 0.62
H3F3A-203ENST00000366815 NPM1P06748 294 aaKnown RBP eCLIP18.94■□□□□ 0.62
H3F3A-203ENST00000366815 DIP2BQ9P265 1576 aa18.93■□□□□ 0.62
H3F3A-203ENST00000366815 PRXQ9BXM0 1461 aa18.93■□□□□ 0.62
H3F3A-203ENST00000366815 ZNF692Q9BU19 519 aaPredicted RBP18.92■□□□□ 0.62
H3F3A-203ENST00000366815 KIAA0556O60303 1618 aa18.91■□□□□ 0.62
H3F3A-203ENST00000366815 UHRF1BP1LA0JNW5 1464 aa18.89■□□□□ 0.61
H3F3A-203ENST00000366815 ABCC2Q92887 1545 aa18.89■□□□□ 0.61
H3F3A-203ENST00000366815 TTBK1Q5TCY1 1321 aaPredicted RBP18.87■□□□□ 0.61
H3F3A-203ENST00000366815 FXR2P51116 673 aaKnown RBP eCLIP18.86■□□□□ 0.61
H3F3A-203ENST00000366815 FAM69CQ0P6D2 419 aa18.86■□□□□ 0.61
H3F3A-203ENST00000366815 UACAQ9BZF9 1416 aa18.85■□□□□ 0.61
H3F3A-203ENST00000366815 KDM5BQ9UGL1 1544 aa18.8■□□□□ 0.6
H3F3A-203ENST00000366815 CLEC11AQ9Y240 323 aa18.8■□□□□ 0.6
H3F3A-203ENST00000366815 SSUH2Q9Y2M2 353 aa18.8■□□□□ 0.6
H3F3A-203ENST00000366815 GOLGA3Q08378 1498 aa18.79■□□□□ 0.6
H3F3A-203ENST00000366815 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
H3F3A-203ENST00000366815 PLB1Q6P1J6 1458 aa18.78■□□□□ 0.6
H3F3A-203ENST00000366815 SPDYE1Q8NFV5 336 aaPredicted RBP18.78■□□□□ 0.6
H3F3A-203ENST00000366815 ZCCHC11Q5TAX3 1644 aaKnown RBP18.78■□□□□ 0.6
H3F3A-203ENST00000366815 TSPOAP1O95153 1857 aa18.77■□□□□ 0.6
H3F3A-203ENST00000366815 GLI2P10070 1586 aa18.76■□□□□ 0.59
H3F3A-203ENST00000366815 EEA1Q15075 1411 aa18.75■□□□□ 0.59
H3F3A-203ENST00000366815 ABCA8O94911 1581 aa18.73■□□□□ 0.59
H3F3A-203ENST00000366815 PPRC1Q5VV67 1664 aaKnown RBP18.72■□□□□ 0.59
H3F3A-203ENST00000366815 KDM6BO15054 1643 aa18.71■□□□□ 0.58
H3F3A-203ENST00000366815 HAX1O00165 279 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms