RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 KCNA4P22459 653 aa12.91□□□□□ -0.34
SMYD3-201ENST00000366516 MAPKBP1O60336 1514 aa12.88□□□□□ -0.35
SMYD3-201ENST00000366516 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
SMYD3-201ENST00000366516 KANK4Q5T7N3 995 aaPredicted RBP12.87□□□□□ -0.35
SMYD3-201ENST00000366516 RAB3GAP2Q9H2M9 1393 aa12.87□□□□□ -0.35
SMYD3-201ENST00000366516 SETD5Q9C0A6 1442 aa12.86□□□□□ -0.35
SMYD3-201ENST00000366516 ARHGAP35Q9NRY4 1499 aa12.86□□□□□ -0.35
SMYD3-201ENST00000366516 TIAM1Q13009 1591 aa12.86□□□□□ -0.35
SMYD3-201ENST00000366516 RANGAP1P46060 587 aaPredicted RBP12.85□□□□□ -0.35
SMYD3-201ENST00000366516 HMGXB3Q12766 1538 aa12.84□□□□□ -0.35
SMYD3-201ENST00000366516 FKBP8Q14318 412 aa12.82□□□□□ -0.36
SMYD3-201ENST00000366516 FHAD1B1AJZ9 1412 aa12.81□□□□□ -0.36
SMYD3-201ENST00000366516 CUX1P39880 1505 aa12.8□□□□□ -0.36
SMYD3-201ENST00000366516 ANP32CO43423 234 aa12.79□□□□□ -0.36
SMYD3-201ENST00000366516 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
SMYD3-201ENST00000366516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMYD3-201ENST00000366516 CFAP43Q8NDM7 1665 aa12.79□□□□□ -0.36
SMYD3-201ENST00000366516 LRRC9Q6ZRR7 1453 aa12.78□□□□□ -0.36
SMYD3-201ENST00000366516 WDR97A6NE52 1622 aa12.77□□□□□ -0.36
SMYD3-201ENST00000366516 NCBP3Q53F19 620 aaKnown RBP12.76□□□□□ -0.37
SMYD3-201ENST00000366516 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
SMYD3-201ENST00000366516 PPP1R15AO75807 674 aaPredicted RBP12.76□□□□□ -0.37
SMYD3-201ENST00000366516 PRDM2Q13029 1718 aa12.75□□□□□ -0.37
SMYD3-201ENST00000366516 RBM19Q9Y4C8 960 aaKnown RBP12.75□□□□□ -0.37
SMYD3-201ENST00000366516 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
SMYD3-201ENST00000366516 DDX10Q13206 875 aaKnown RBP12.74□□□□□ -0.37
SMYD3-201ENST00000366516 CFTRP13569 1480 aa12.73□□□□□ -0.37
SMYD3-201ENST00000366516 ERCC6Q03468 1493 aa12.73□□□□□ -0.37
SMYD3-201ENST00000366516 ERICH6BQ5W0A0 696 aa12.73□□□□□ -0.37
SMYD3-201ENST00000366516 MAPK8IP2Q13387 824 aaPredicted RBP12.72□□□□□ -0.37
SMYD3-201ENST00000366516 BCANQ96GW7 911 aa12.72□□□□□ -0.37
SMYD3-201ENST00000366516 ITGAEP38570 1179 aa12.72□□□□□ -0.37
SMYD3-201ENST00000366516 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.38
SMYD3-201ENST00000366516 KCNH8Q96L42 1107 aa12.7□□□□□ -0.38
SMYD3-201ENST00000366516 FYCO1Q9BQS8 1478 aa12.68□□□□□ -0.38
SMYD3-201ENST00000366516 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
SMYD3-201ENST00000366516 PHLDB1Q86UU1 1377 aa12.68□□□□□ -0.38
SMYD3-201ENST00000366516 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
SMYD3-201ENST00000366516 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
SMYD3-201ENST00000366516 AQRO60306 1485 aaKnown RBP eCLIP12.67□□□□□ -0.381e-6■■■■□ 20.6
SMYD3-201ENST00000366516 CDK11AQ9UQ88 783 aaPredicted RBP12.66□□□□□ -0.38
SMYD3-201ENST00000366516 ERICH6Q7L0X2 663 aa12.65□□□□□ -0.38
SMYD3-201ENST00000366516 PCF11O94913 1555 aaKnown RBP12.65□□□□□ -0.38
SMYD3-201ENST00000366516 IGF1RP08069 1367 aa12.65□□□□□ -0.38
SMYD3-201ENST00000366516 CARMIL1Q5VZK9 1371 aa12.64□□□□□ -0.39
SMYD3-201ENST00000366516 FAM50AQ14320 339 aaKnown RBP12.64□□□□□ -0.39
SMYD3-201ENST00000366516 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
SMYD3-201ENST00000366516 FGD5Q6ZNL6 1462 aa12.61□□□□□ -0.39
SMYD3-201ENST00000366516 TRIM52Q96A61 297 aa12.61□□□□□ -0.39
SMYD3-201ENST00000366516 SIN3AQ96ST3 1273 aa12.61□□□□□ -0.39
SMYD3-201ENST00000366516 CASKIN1Q8WXD9 1431 aa12.61□□□□□ -0.39
SMYD3-201ENST00000366516 HFM1A2PYH4 1435 aa12.6□□□□□ -0.39
SMYD3-201ENST00000366516 CCDC18Q5T9S5 1454 aa12.6□□□□□ -0.39
SMYD3-201ENST00000366516 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
SMYD3-201ENST00000366516 FGD6Q6ZV73 1430 aa12.58□□□□□ -0.4
SMYD3-201ENST00000366516 NPM3O75607 178 aaKnown RBP12.57□□□□□ -0.4
SMYD3-201ENST00000366516 PTPN23Q9H3S7 1636 aa12.55□□□□□ -0.4
SMYD3-201ENST00000366516 CUL7Q14999 1698 aa12.55□□□□□ -0.4
SMYD3-201ENST00000366516 THOC2Q8NI27 1593 aaKnown RBP12.55□□□□□ -0.4
SMYD3-201ENST00000366516 HNRNPUQ00839 825 aaKnown RBP eCLIP12.54□□□□□ -0.4
SMYD3-201ENST00000366516 PPP4R2Q9NY27 417 aa12.54□□□□□ -0.4
SMYD3-201ENST00000366516 NESP48681 1621 aa12.53□□□□□ -0.4
SMYD3-201ENST00000366516 CTTNBP2Q8WZ74 1663 aa12.53□□□□□ -0.4
SMYD3-201ENST00000366516 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
SMYD3-201ENST00000366516 NCOA2Q15596 1464 aa12.51□□□□□ -0.41
SMYD3-201ENST00000366516 CADPSQ9ULU8 1353 aa12.49□□□□□ -0.41
SMYD3-201ENST00000366516 AKNAQ7Z591 1439 aa12.49□□□□□ -0.41
SMYD3-201ENST00000366516 HECW1Q76N89 1606 aa12.49□□□□□ -0.41
SMYD3-201ENST00000366516 FHOD3Q2V2M9 1422 aa12.48□□□□□ -0.41
SMYD3-201ENST00000366516 MTUS2Q5JR59 1369 aa12.48□□□□□ -0.41
SMYD3-201ENST00000366516 EHBP1L1Q8N3D4 1523 aa12.48□□□□□ -0.41
SMYD3-201ENST00000366516 CNTLNQ9NXG0 1405 aa12.48□□□□□ -0.41
SMYD3-201ENST00000366516 SUPT6HQ7KZ85 1726 aaKnown RBP12.48□□□□□ -0.41
SMYD3-201ENST00000366516 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
SMYD3-201ENST00000366516 NAIPQ13075 1403 aa12.48□□□□□ -0.41
SMYD3-201ENST00000366516 MYOM3Q5VTT5 1437 aa12.48□□□□□ -0.41
SMYD3-201ENST00000366516 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
SMYD3-201ENST00000366516 SNAPC4Q5SXM2 1469 aa12.47□□□□□ -0.41
SMYD3-201ENST00000366516 GCC2Q8IWJ2 1684 aa12.46□□□□□ -0.41
SMYD3-201ENST00000366516 KDM5BQ9UGL1 1544 aa12.46□□□□□ -0.41
SMYD3-201ENST00000366516 ZBED9Q6R2W3 1325 aa12.46□□□□□ -0.42
SMYD3-201ENST00000366516 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.421e-7■■■■■ 37.5
SMYD3-201ENST00000366516 HIRIP3Q9BW71 556 aaPredicted RBP12.45□□□□□ -0.42
SMYD3-201ENST00000366516 ATP1B4Q9UN42 357 aaPredicted RBP12.44□□□□□ -0.42
SMYD3-201ENST00000366516 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
SMYD3-201ENST00000366516 SAMD9Q5K651 1589 aa12.42□□□□□ -0.42
SMYD3-201ENST00000366516 TCOF1Q13428 1488 aaKnown RBP12.41□□□□□ -0.42
SMYD3-201ENST00000366516 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
SMYD3-201ENST00000366516 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
SMYD3-201ENST00000366516 POLR1AO95602 1720 aaPredicted RBP12.4□□□□□ -0.42
SMYD3-201ENST00000366516 NCOA1Q15788 1441 aa12.4□□□□□ -0.42
SMYD3-201ENST00000366516 RNF216Q9NWF9 866 aaPredicted RBP12.4□□□□□ -0.42
SMYD3-201ENST00000366516 UGGT2Q9NYU1 1516 aa12.39□□□□□ -0.43
SMYD3-201ENST00000366516 HSPA5P11021 654 aaKnown RBP12.39□□□□□ -0.43
SMYD3-201ENST00000366516 ARHGEF11O15085 1522 aa12.39□□□□□ -0.43
SMYD3-201ENST00000366516 PTPRKQ15262 1439 aa12.39□□□□□ -0.43
SMYD3-201ENST00000366516 GRIN2BQ13224 1484 aa12.38□□□□□ -0.43
SMYD3-201ENST00000366516 NOP58Q9Y2X3 529 aaKnown RBP12.38□□□□□ -0.43
SMYD3-201ENST00000366516 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
SMYD3-201ENST00000366516 FANCD2Q9BXW9 1451 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms