RNA–Protein interactions for RNA: ENST00000360453.8

PPARGC1B-202, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPARGC1B, Length 3,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-202ENST00000360453 IGF1RP08069 1367 aa19.25■□□□□ 0.67
PPARGC1B-202ENST00000360453 MAPKBP1O60336 1514 aa19.24■□□□□ 0.67
PPARGC1B-202ENST00000360453 WDR97A6NE52 1622 aa19.21■□□□□ 0.67
PPARGC1B-202ENST00000360453 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
PPARGC1B-202ENST00000360453 SETD5Q9C0A6 1442 aa19.2■□□□□ 0.66
PPARGC1B-202ENST00000360453 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
PPARGC1B-202ENST00000360453 CFTRP13569 1480 aa19.18■□□□□ 0.66
PPARGC1B-202ENST00000360453 TIAM1Q13009 1591 aa19.13■□□□□ 0.65
PPARGC1B-202ENST00000360453 LRRC9Q6ZRR7 1453 aa19.13■□□□□ 0.65
PPARGC1B-202ENST00000360453 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
PPARGC1B-202ENST00000360453 PPP1R15AO75807 674 aaPredicted RBP19.09■□□□□ 0.65
PPARGC1B-202ENST00000360453 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
PPARGC1B-202ENST00000360453 HMGXB3Q12766 1538 aa19.09■□□□□ 0.65
PPARGC1B-202ENST00000360453 ANP32CO43423 234 aa19.04■□□□□ 0.64
PPARGC1B-202ENST00000360453 IRX6P78412 446 aaPredicted RBP19.04■□□□□ 0.64
PPARGC1B-202ENST00000360453 RAD54L2Q9Y4B4 1467 aa19.02■□□□□ 0.64
PPARGC1B-202ENST00000360453 PCF11O94913 1555 aaKnown RBP19.01■□□□□ 0.63
PPARGC1B-202ENST00000360453 CADPSQ9ULU8 1353 aa19.01■□□□□ 0.63
PPARGC1B-202ENST00000360453 NEFLP07196 543 aa19.01■□□□□ 0.63
PPARGC1B-202ENST00000360453 ARID3CA6NKF2 412 aa18.99■□□□□ 0.63
PPARGC1B-202ENST00000360453 CHIC2Q9UKJ5 165 aa18.98■□□□□ 0.63
PPARGC1B-202ENST00000360453 TONSLQ96HA7 1378 aa18.98■□□□□ 0.63
PPARGC1B-202ENST00000360453 ANP32EQ9BTT0 268 aa18.97■□□□□ 0.63
PPARGC1B-202ENST00000360453 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
PPARGC1B-202ENST00000360453 RRP7BPQ9NSQ0 103 aa18.93■□□□□ 0.62
PPARGC1B-202ENST00000360453 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
PPARGC1B-202ENST00000360453 HNRNPUQ00839 825 aaKnown RBP eCLIP18.91■□□□□ 0.62
PPARGC1B-202ENST00000360453 PTPRKQ15262 1439 aa18.91■□□□□ 0.62
PPARGC1B-202ENST00000360453 CNGB1Q14028 1251 aaPredicted RBP18.91■□□□□ 0.62
PPARGC1B-202ENST00000360453 MTUS2Q5JR59 1369 aa18.9■□□□□ 0.62
PPARGC1B-202ENST00000360453 MAP3K1Q13233 1512 aa18.88■□□□□ 0.61
PPARGC1B-202ENST00000360453 FOXD1Q16676 465 aa18.87■□□□□ 0.61
PPARGC1B-202ENST00000360453 FANCD2Q9BXW9 1451 aa18.87■□□□□ 0.61
PPARGC1B-202ENST00000360453 NESP48681 1621 aa18.86■□□□□ 0.61
PPARGC1B-202ENST00000360453 CCDC18Q5T9S5 1454 aa18.85■□□□□ 0.61
PPARGC1B-202ENST00000360453 FGD6Q6ZV73 1430 aa18.85■□□□□ 0.61
PPARGC1B-202ENST00000360453 CCER2I3L3R5 266 aa18.84■□□□□ 0.61
PPARGC1B-202ENST00000360453 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
PPARGC1B-202ENST00000360453 AQRO60306 1485 aaKnown RBP eCLIP18.83■□□□□ 0.612e-6■■■■■ 26.9
PPARGC1B-202ENST00000360453 CCDC184Q52MB2 194 aa18.82■□□□□ 0.6
PPARGC1B-202ENST00000360453 SENP3-EIF4A1A0A087X0R7 540 aa18.82■□□□□ 0.6
PPARGC1B-202ENST00000360453 TIMELESSQ9UNS1 1208 aa18.82■□□□□ 0.6
PPARGC1B-202ENST00000360453 CFAP43Q8NDM7 1665 aa18.81■□□□□ 0.6
PPARGC1B-202ENST00000360453 CASKIN1Q8WXD9 1431 aa18.8■□□□□ 0.6
PPARGC1B-202ENST00000360453 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
PPARGC1B-202ENST00000360453 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
PPARGC1B-202ENST00000360453 FYCO1Q9BQS8 1478 aa18.78■□□□□ 0.6
PPARGC1B-202ENST00000360453 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
PPARGC1B-202ENST00000360453 FAM9BQ8IZU0 186 aa18.75■□□□□ 0.59
PPARGC1B-202ENST00000360453 NAIPQ13075 1403 aa18.74■□□□□ 0.59
PPARGC1B-202ENST00000360453 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
PPARGC1B-202ENST00000360453 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
PPARGC1B-202ENST00000360453 UACAQ9BZF9 1416 aa18.73■□□□□ 0.59
PPARGC1B-202ENST00000360453 MSH5O43196 834 aa18.73■□□□□ 0.59
PPARGC1B-202ENST00000360453 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
PPARGC1B-202ENST00000360453 C11orf95C9JLR9 678 aaPredicted RBP18.72■□□□□ 0.59
PPARGC1B-202ENST00000360453 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
PPARGC1B-202ENST00000360453 HFM1A2PYH4 1435 aa18.71■□□□□ 0.59
PPARGC1B-202ENST00000360453 FMN1Q68DA7 1419 aa18.71■□□□□ 0.59
PPARGC1B-202ENST00000360453 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
PPARGC1B-202ENST00000360453 PTPN23Q9H3S7 1636 aa18.69■□□□□ 0.58
PPARGC1B-202ENST00000360453 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
PPARGC1B-202ENST00000360453 POLR3GLQ9BT43 218 aa18.68■□□□□ 0.58
PPARGC1B-202ENST00000360453 ABCA10Q8WWZ4 1543 aa18.68■□□□□ 0.58
PPARGC1B-202ENST00000360453 L3MBTL2Q969R5 705 aa18.67■□□□□ 0.58
PPARGC1B-202ENST00000360453 MYOM3Q5VTT5 1437 aa18.66■□□□□ 0.58
PPARGC1B-202ENST00000360453 EFCAB5A4FU69 1503 aa18.65■□□□□ 0.58
PPARGC1B-202ENST00000360453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.64■□□□□ 0.571e-7■■■■■ 39.2
PPARGC1B-202ENST00000360453 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.572e-6■■■■□ 20
PPARGC1B-202ENST00000360453 DNMBPQ6XZF7 1577 aa18.64■□□□□ 0.57
PPARGC1B-202ENST00000360453 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
PPARGC1B-202ENST00000360453 MPHOSPH9Q99550 1183 aa18.62■□□□□ 0.57
PPARGC1B-202ENST00000360453 LRRIQ1Q96JM4 1722 aa18.62■□□□□ 0.57
PPARGC1B-202ENST00000360453 MRS2Q9HD23 443 aa18.62■□□□□ 0.57
PPARGC1B-202ENST00000360453 CDK11AQ9UQ88 783 aaPredicted RBP18.61■□□□□ 0.57
PPARGC1B-202ENST00000360453 BCL11AQ9H165 835 aa18.61■□□□□ 0.57
PPARGC1B-202ENST00000360453 KDM5BQ9UGL1 1544 aa18.61■□□□□ 0.57
PPARGC1B-202ENST00000360453 ZNF326Q5BKZ1 582 aaKnown RBP18.6■□□□□ 0.57
PPARGC1B-202ENST00000360453 MAGI3Q5TCQ9 1506 aa18.59■□□□□ 0.57
PPARGC1B-202ENST00000360453 CTTNBP2Q8WZ74 1663 aa18.59■□□□□ 0.57
PPARGC1B-202ENST00000360453 KDM6BO15054 1643 aa18.59■□□□□ 0.57
PPARGC1B-202ENST00000360453 NBPF8Q3BBV2 869 aa18.59■□□□□ 0.57
PPARGC1B-202ENST00000360453 ZNF644Q9H582 1327 aaPredicted RBP18.58■□□□□ 0.56
PPARGC1B-202ENST00000360453 URB2Q14146 1524 aaKnown RBP18.57■□□□□ 0.56
PPARGC1B-202ENST00000360453 DENND4BO75064 1496 aaPredicted RBP18.57■□□□□ 0.56
PPARGC1B-202ENST00000360453 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
PPARGC1B-202ENST00000360453 GAPVD1Q14C86 1478 aa18.55■□□□□ 0.56
PPARGC1B-202ENST00000360453 PRKRIP1Q9H875 184 aaPredicted RBP18.55■□□□□ 0.56
PPARGC1B-202ENST00000360453 ERICH6Q7L0X2 663 aa18.53■□□□□ 0.56
PPARGC1B-202ENST00000360453 CUL7Q14999 1698 aa18.52■□□□□ 0.56
PPARGC1B-202ENST00000360453 CDK13Q14004 1512 aaKnown RBP18.52■□□□□ 0.56
PPARGC1B-202ENST00000360453 SLC4A1APQ9BWU0 796 aaKnown RBP18.5■□□□□ 0.55
PPARGC1B-202ENST00000360453 SUPT6HQ7KZ85 1726 aaKnown RBP18.5■□□□□ 0.55
PPARGC1B-202ENST00000360453 CCDC7Q96M83 1385 aa18.48■□□□□ 0.55
PPARGC1B-202ENST00000360453 CNTLNQ9NXG0 1405 aa18.48■□□□□ 0.55
PPARGC1B-202ENST00000360453 UGGT2Q9NYU1 1516 aa18.47■□□□□ 0.55
PPARGC1B-202ENST00000360453 KIF7Q2M1P5 1343 aa18.47■□□□□ 0.55
PPARGC1B-202ENST00000360453 ZNF777Q9ULD5 760 aaPredicted RBP18.47■□□□□ 0.55
PPARGC1B-202ENST00000360453 PPP4R2Q9NY27 417 aa18.47■□□□□ 0.55
PPARGC1B-202ENST00000360453 EHBP1L1Q8N3D4 1523 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms