RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
UBAP1-202ENST00000359544 PBRM1Q86U86 1689 aa22■■□□□ 1.11
UBAP1-202ENST00000359544 CHD1O14646 1710 aa21.98■■□□□ 1.11
UBAP1-202ENST00000359544 TNIKQ9UKE5 1360 aa21.95■■□□□ 1.1
UBAP1-202ENST00000359544 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
UBAP1-202ENST00000359544 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
UBAP1-202ENST00000359544 SYNJ2O15056 1496 aa21.89■■□□□ 1.09
UBAP1-202ENST00000359544 KIF27Q86VH2 1401 aa21.88■■□□□ 1.09
UBAP1-202ENST00000359544 IGF1RP08069 1367 aa21.85■■□□□ 1.09
UBAP1-202ENST00000359544 ANP32EQ9BTT0 268 aa21.84■■□□□ 1.09
UBAP1-202ENST00000359544 ADAMTS12P58397 1594 aa21.84■■□□□ 1.09
UBAP1-202ENST00000359544 SUPT16HQ9Y5B9 1047 aaKnown RBP21.83■■□□□ 1.09
UBAP1-202ENST00000359544 ERICH3Q5RHP9 1530 aa21.83■■□□□ 1.08
UBAP1-202ENST00000359544 EEA1Q15075 1411 aa21.82■■□□□ 1.08
UBAP1-202ENST00000359544 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
UBAP1-202ENST00000359544 GRIN2AQ12879 1464 aa21.79■■□□□ 1.08
UBAP1-202ENST00000359544 TSHZ2Q9NRE2 1034 aa21.72■■□□□ 1.07
UBAP1-202ENST00000359544 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
UBAP1-202ENST00000359544 CARMIL1Q5VZK9 1371 aa21.71■■□□□ 1.07
UBAP1-202ENST00000359544 BCL11AQ9H165 835 aa21.71■■□□□ 1.07
UBAP1-202ENST00000359544 CLASP1Q7Z460 1538 aa21.69■■□□□ 1.06
UBAP1-202ENST00000359544 GOLGA3Q08378 1498 aa21.68■■□□□ 1.06
UBAP1-202ENST00000359544 ARHGEF11O15085 1522 aa21.68■■□□□ 1.06
UBAP1-202ENST00000359544 RIMBP3CA6NJZ7 1639 aa21.67■■□□□ 1.06
UBAP1-202ENST00000359544 RIMBP3BA6NNM3 1639 aa21.67■■□□□ 1.06
UBAP1-202ENST00000359544 RIMBP3Q9UFD9 1639 aa21.67■■□□□ 1.06
UBAP1-202ENST00000359544 UBTFP17480 764 aaKnown RBP21.66■■□□□ 1.06
UBAP1-202ENST00000359544 HNRNPUL2Q1KMD3 747 aaKnown RBP21.66■■□□□ 1.06
UBAP1-202ENST00000359544 CSRNP3Q8WYN3 585 aa21.66■■□□□ 1.06
UBAP1-202ENST00000359544 NUP160Q12769 1436 aa21.65■■□□□ 1.06
UBAP1-202ENST00000359544 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.05
UBAP1-202ENST00000359544 CUL7Q14999 1698 aa21.62■■□□□ 1.05
UBAP1-202ENST00000359544 ERCC6L2Q5T890 1561 aa21.58■■□□□ 1.05
UBAP1-202ENST00000359544 JPH4Q96JJ6 628 aa21.55■■□□□ 1.04
UBAP1-202ENST00000359544 RAPGEF2Q9Y4G8 1499 aa21.54■■□□□ 1.04
UBAP1-202ENST00000359544 ARAP1Q96P48 1450 aa21.53■■□□□ 1.04
UBAP1-202ENST00000359544 PRG4Q92954 1404 aaPredicted RBP21.49■■□□□ 1.03
UBAP1-202ENST00000359544 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
UBAP1-202ENST00000359544 VPS8Q8N3P4 1428 aa21.48■■□□□ 1.03
UBAP1-202ENST00000359544 KIAA0586Q9BVV6 1533 aa21.46■■□□□ 1.03
UBAP1-202ENST00000359544 KIF21BO75037 1637 aa21.46■■□□□ 1.03
UBAP1-202ENST00000359544 CLIP1P30622 1438 aa21.44■■□□□ 1.02
UBAP1-202ENST00000359544 RANGAP1P46060 587 aaPredicted RBP21.44■■□□□ 1.02
UBAP1-202ENST00000359544 APLP2Q06481 763 aa21.44■■□□□ 1.02
UBAP1-202ENST00000359544 SHROOM2Q13796 1616 aa21.43■■□□□ 1.02
UBAP1-202ENST00000359544 DHX57Q6P158 1386 aaKnown RBP21.41■■□□□ 1.02
UBAP1-202ENST00000359544 IQGAP2Q13576 1575 aa21.37■■□□□ 1.01
UBAP1-202ENST00000359544 P3H3Q8IVL6 736 aa21.31■■□□□ 1
UBAP1-202ENST00000359544 CTTNBP2Q8WZ74 1663 aa21.27■■□□□ 1
UBAP1-202ENST00000359544 DISP1Q96F81 1524 aa21.27■■□□□ 1
UBAP1-202ENST00000359544 CARMIL2Q6F5E8 1435 aa21.23■□□□□ 0.99
UBAP1-202ENST00000359544 FKBP8Q14318 412 aa21.22■□□□□ 0.99
UBAP1-202ENST00000359544 RBM19Q9Y4C8 960 aaKnown RBP21.22■□□□□ 0.99
UBAP1-202ENST00000359544 PTPRGP23470 1445 aa21.22■□□□□ 0.99
UBAP1-202ENST00000359544 UGGT2Q9NYU1 1516 aa21.21■□□□□ 0.99
UBAP1-202ENST00000359544 BCANQ96GW7 911 aa21.21■□□□□ 0.99
UBAP1-202ENST00000359544 NEFLP07196 543 aa21.19■□□□□ 0.98
UBAP1-202ENST00000359544 TRHP20396 242 aaPredicted RBP21.18■□□□□ 0.98
UBAP1-202ENST00000359544 KIAA0556O60303 1618 aa21.17■□□□□ 0.98
UBAP1-202ENST00000359544 ARID3CA6NKF2 412 aa21.13■□□□□ 0.97
UBAP1-202ENST00000359544 ADCY10Q96PN6 1610 aa21.11■□□□□ 0.97
UBAP1-202ENST00000359544 RRBP1Q9P2E9 1410 aaKnown RBP21.11■□□□□ 0.97
UBAP1-202ENST00000359544 KCNH8Q96L42 1107 aa21.11■□□□□ 0.97
UBAP1-202ENST00000359544 PLB1Q6P1J6 1458 aa21.08■□□□□ 0.96
UBAP1-202ENST00000359544 FHOD3Q2V2M9 1422 aa21.08■□□□□ 0.96
UBAP1-202ENST00000359544 NPM1P06748 294 aaKnown RBP eCLIP21.06■□□□□ 0.96
UBAP1-202ENST00000359544 UACAQ9BZF9 1416 aa21.04■□□□□ 0.96
UBAP1-202ENST00000359544 SAMD9Q5K651 1589 aa21.02■□□□□ 0.96
UBAP1-202ENST00000359544 FANCIQ9NVI1 1328 aa21■□□□□ 0.95
UBAP1-202ENST00000359544 MYT1LQ9UL68 1186 aa20.98■□□□□ 0.95
UBAP1-202ENST00000359544 CCER2I3L3R5 266 aa20.97■□□□□ 0.95
UBAP1-202ENST00000359544 ABCC2Q92887 1545 aa20.97■□□□□ 0.95
UBAP1-202ENST00000359544 MSH5O43196 834 aa20.96■□□□□ 0.95
UBAP1-202ENST00000359544 ARHGAP35Q9NRY4 1499 aa20.96■□□□□ 0.95
UBAP1-202ENST00000359544 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
UBAP1-202ENST00000359544 ERICH6Q7L0X2 663 aa20.94■□□□□ 0.94
UBAP1-202ENST00000359544 ATP1B4Q9UN42 357 aaPredicted RBP20.94■□□□□ 0.94
UBAP1-202ENST00000359544 MAPKBP1O60336 1514 aa20.93■□□□□ 0.94
UBAP1-202ENST00000359544 KANK4Q5T7N3 995 aaPredicted RBP20.93■□□□□ 0.94
UBAP1-202ENST00000359544 ABCA8O94911 1581 aa20.92■□□□□ 0.94
UBAP1-202ENST00000359544 UHRF1BP1LA0JNW5 1464 aa20.92■□□□□ 0.94
UBAP1-202ENST00000359544 FAM69CQ0P6D2 419 aa20.92■□□□□ 0.94
UBAP1-202ENST00000359544 DDX10Q13206 875 aaKnown RBP20.92■□□□□ 0.94
UBAP1-202ENST00000359544 ITGAEP38570 1179 aa20.9■□□□□ 0.94
UBAP1-202ENST00000359544 ASXL2Q76L83 1435 aa20.89■□□□□ 0.93
UBAP1-202ENST00000359544 EFCAB5A4FU69 1503 aa20.88■□□□□ 0.93
UBAP1-202ENST00000359544 PPP1R15AO75807 674 aaPredicted RBP20.88■□□□□ 0.93
UBAP1-202ENST00000359544 KDM5BQ9UGL1 1544 aa20.88■□□□□ 0.93
UBAP1-202ENST00000359544 ZCCHC11Q5TAX3 1644 aaKnown RBP20.88■□□□□ 0.93
UBAP1-202ENST00000359544 RAB3GAP2Q9H2M9 1393 aa20.86■□□□□ 0.93
UBAP1-202ENST00000359544 ANP32CO43423 234 aa20.85■□□□□ 0.93
UBAP1-202ENST00000359544 CDK11AQ9UQ88 783 aaPredicted RBP20.85■□□□□ 0.93
UBAP1-202ENST00000359544 RAPGEF6Q8TEU7 1601 aa20.84■□□□□ 0.93
UBAP1-202ENST00000359544 ATP10BO94823 1461 aa20.83■□□□□ 0.92
UBAP1-202ENST00000359544 NUP153P49790 1475 aaKnown RBP20.82■□□□□ 0.92
UBAP1-202ENST00000359544 TRIM52Q96A61 297 aa20.82■□□□□ 0.92
UBAP1-202ENST00000359544 ABCC10Q5T3U5 1492 aa20.82■□□□□ 0.92
UBAP1-202ENST00000359544 TIMELESSQ9UNS1 1208 aa20.82■□□□□ 0.92
UBAP1-202ENST00000359544 KIF13AQ9H1H9 1805 aa20.81■□□□□ 0.92
UBAP1-202ENST00000359544 DIP2BQ9P265 1576 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms