RNA–Protein interactions for RNA: ENST00000359191.10

SUPT5H-201, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SUPT5H, Length 3,770 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-201ENST00000359191 RBM19Q9Y4C8 960 aaKnown RBP16.36■□□□□ 0.21
SUPT5H-201ENST00000359191 BCL11AQ9H165 835 aa16.36■□□□□ 0.21
SUPT5H-201ENST00000359191 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
SUPT5H-201ENST00000359191 P3H3Q8IVL6 736 aa16.34■□□□□ 0.21
SUPT5H-201ENST00000359191 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
SUPT5H-201ENST00000359191 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
SUPT5H-201ENST00000359191 ERICH3Q5RHP9 1530 aa16.31■□□□□ 0.2
SUPT5H-201ENST00000359191 CUX1P39880 1505 aa16.31■□□□□ 0.2
SUPT5H-201ENST00000359191 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
SUPT5H-201ENST00000359191 CUX2O14529 1486 aa16.3■□□□□ 0.2
SUPT5H-201ENST00000359191 NESP48681 1621 aa16.28■□□□□ 0.2
SUPT5H-201ENST00000359191 FANCD2Q9BXW9 1451 aa16.27■□□□□ 0.19
SUPT5H-201ENST00000359191 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
SUPT5H-201ENST00000359191 CCER2I3L3R5 266 aa16.26■□□□□ 0.19
SUPT5H-201ENST00000359191 IRX6P78412 446 aaPredicted RBP16.25■□□□□ 0.19
SUPT5H-201ENST00000359191 HNRNPUQ00839 825 aaKnown RBP eCLIP16.25■□□□□ 0.19
SUPT5H-201ENST00000359191 TONSLQ96HA7 1378 aa16.24■□□□□ 0.19
SUPT5H-201ENST00000359191 ARHGAP35Q9NRY4 1499 aa16.24■□□□□ 0.19
SUPT5H-201ENST00000359191 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
SUPT5H-201ENST00000359191 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
SUPT5H-201ENST00000359191 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
SUPT5H-201ENST00000359191 FGD5Q6ZNL6 1462 aa16.19■□□□□ 0.18
SUPT5H-201ENST00000359191 MAPKBP1O60336 1514 aa16.19■□□□□ 0.18
SUPT5H-201ENST00000359191 PHLDB1Q86UU1 1377 aa16.17■□□□□ 0.18
SUPT5H-201ENST00000359191 CARMIL1Q5VZK9 1371 aa16.17■□□□□ 0.18
SUPT5H-201ENST00000359191 BIVM-ERCC5R4GMW8 1640 aa16.16■□□□□ 0.18
SUPT5H-201ENST00000359191 RAD54L2Q9Y4B4 1467 aa16.14■□□□□ 0.17
SUPT5H-201ENST00000359191 IGF1RP08069 1367 aa16.13■□□□□ 0.17
SUPT5H-201ENST00000359191 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
SUPT5H-201ENST00000359191 LRRC9Q6ZRR7 1453 aa16.11■□□□□ 0.17
SUPT5H-201ENST00000359191 TDRD9Q8NDG6 1382 aaKnown RBP16.11■□□□□ 0.17
SUPT5H-201ENST00000359191 FHAD1B1AJZ9 1412 aa16.1■□□□□ 0.17
SUPT5H-201ENST00000359191 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
SUPT5H-201ENST00000359191 MSH5O43196 834 aa16.06■□□□□ 0.16
SUPT5H-201ENST00000359191 FAM9BQ8IZU0 186 aa16.05■□□□□ 0.16
SUPT5H-201ENST00000359191 TOPBP1Q92547 1522 aa16.04■□□□□ 0.16
SUPT5H-201ENST00000359191 CNGB1Q14028 1251 aaPredicted RBP16.04■□□□□ 0.16
SUPT5H-201ENST00000359191 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.15
SUPT5H-201ENST00000359191 MTUS2Q5JR59 1369 aa16.02■□□□□ 0.15
SUPT5H-201ENST00000359191 FHOD3Q2V2M9 1422 aa16■□□□□ 0.15
SUPT5H-201ENST00000359191 FANCIQ9NVI1 1328 aa16■□□□□ 0.15
SUPT5H-201ENST00000359191 PPP4R2Q9NY27 417 aa16■□□□□ 0.15
SUPT5H-201ENST00000359191 CHIC2Q9UKJ5 165 aa15.99■□□□□ 0.15
SUPT5H-201ENST00000359191 MAP3K1Q13233 1512 aa15.98■□□□□ 0.15
SUPT5H-201ENST00000359191 DNMBPQ6XZF7 1577 aa15.98■□□□□ 0.15
SUPT5H-201ENST00000359191 B4GALNT3Q6L9W6 998 aa15.98■□□□□ 0.15
SUPT5H-201ENST00000359191 HSPA5P11021 654 aaKnown RBP15.97■□□□□ 0.15
SUPT5H-201ENST00000359191 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
SUPT5H-201ENST00000359191 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
SUPT5H-201ENST00000359191 RRP7BPQ9NSQ0 103 aa15.97■□□□□ 0.15
SUPT5H-201ENST00000359191 FBLN2P98095 1184 aa15.96■□□□□ 0.15
SUPT5H-201ENST00000359191 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.14
SUPT5H-201ENST00000359191 POLR3GLQ9BT43 218 aa15.95■□□□□ 0.14
SUPT5H-201ENST00000359191 CCDC18Q5T9S5 1454 aa15.95■□□□□ 0.14
SUPT5H-201ENST00000359191 URB2Q14146 1524 aaKnown RBP15.94■□□□□ 0.14
SUPT5H-201ENST00000359191 ARID3CA6NKF2 412 aa15.94■□□□□ 0.14
SUPT5H-201ENST00000359191 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
SUPT5H-201ENST00000359191 NBR1Q14596 966 aa15.91■□□□□ 0.14
SUPT5H-201ENST00000359191 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
SUPT5H-201ENST00000359191 ERICH6BQ5W0A0 696 aa15.91■□□□□ 0.14
SUPT5H-201ENST00000359191 FGD6Q6ZV73 1430 aa15.9■□□□□ 0.14
SUPT5H-201ENST00000359191 MYT1LQ9UL68 1186 aa15.9■□□□□ 0.14
SUPT5H-201ENST00000359191 WASHC2AQ641Q2 1341 aa15.9■□□□□ 0.14
SUPT5H-201ENST00000359191 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
SUPT5H-201ENST00000359191 PCF11O94913 1555 aaKnown RBP15.89■□□□□ 0.13
SUPT5H-201ENST00000359191 ABCA10Q8WWZ4 1543 aa15.89■□□□□ 0.13
SUPT5H-201ENST00000359191 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
SUPT5H-201ENST00000359191 DEKP35659 375 aaKnown RBP15.86■□□□□ 0.13
SUPT5H-201ENST00000359191 CCDC184Q52MB2 194 aa15.86■□□□□ 0.13
SUPT5H-201ENST00000359191 AQRO60306 1485 aaKnown RBP eCLIP15.85■□□□□ 0.133e-7■■■■□ 24.7
SUPT5H-201ENST00000359191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.85■□□□□ 0.132e-9■□□□□ 9
SUPT5H-201ENST00000359191 CASKIN1Q8WXD9 1431 aa15.84■□□□□ 0.13
SUPT5H-201ENST00000359191 FYCO1Q9BQS8 1478 aa15.84■□□□□ 0.13
SUPT5H-201ENST00000359191 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
SUPT5H-201ENST00000359191 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.13
SUPT5H-201ENST00000359191 NOP58Q9Y2X3 529 aaKnown RBP15.83■□□□□ 0.13
SUPT5H-201ENST00000359191 HFM1A2PYH4 1435 aa15.83■□□□□ 0.12
SUPT5H-201ENST00000359191 FOXD1Q16676 465 aa15.83■□□□□ 0.12
SUPT5H-201ENST00000359191 CCDC136Q96JN2 1154 aa15.83■□□□□ 0.12
SUPT5H-201ENST00000359191 PRKRIP1Q9H875 184 aaPredicted RBP15.83■□□□□ 0.12
SUPT5H-201ENST00000359191 ANP32AP39687 249 aaKnown RBP15.82■□□□□ 0.12
SUPT5H-201ENST00000359191 SENP3-EIF4A1A0A087X0R7 540 aa15.82■□□□□ 0.12
SUPT5H-201ENST00000359191 L3MBTL2Q969R5 705 aa15.81■□□□□ 0.12
SUPT5H-201ENST00000359191 ZNF326Q5BKZ1 582 aaKnown RBP15.8■□□□□ 0.12
SUPT5H-201ENST00000359191 PTPRKQ15262 1439 aa15.79■□□□□ 0.12
SUPT5H-201ENST00000359191 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
SUPT5H-201ENST00000359191 NAIPQ13075 1403 aa15.78■□□□□ 0.12
SUPT5H-201ENST00000359191 ZBED9Q6R2W3 1325 aa15.78■□□□□ 0.12
SUPT5H-201ENST00000359191 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
SUPT5H-201ENST00000359191 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.12
SUPT5H-201ENST00000359191 MPHOSPH9Q99550 1183 aa15.77■□□□□ 0.12
SUPT5H-201ENST00000359191 CFAP43Q8NDM7 1665 aa15.77■□□□□ 0.12
SUPT5H-201ENST00000359191 CNTLNQ9NXG0 1405 aa15.77■□□□□ 0.11
SUPT5H-201ENST00000359191 MYOM3Q5VTT5 1437 aa15.75■□□□□ 0.11
SUPT5H-201ENST00000359191 ZBTB47Q9UFB7 747 aaPredicted RBP15.75■□□□□ 0.11
SUPT5H-201ENST00000359191 C11orf95C9JLR9 678 aaPredicted RBP15.74■□□□□ 0.11
SUPT5H-201ENST00000359191 CCDC7Q96M83 1385 aa15.73■□□□□ 0.11
SUPT5H-201ENST00000359191 NCOA2Q15596 1464 aa15.73■□□□□ 0.11
SUPT5H-201ENST00000359191 PTPN23Q9H3S7 1636 aa15.73■□□□□ 0.11
SUPT5H-201ENST00000359191 EFCAB5A4FU69 1503 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms