RNA–Protein interactions for RNA: ENST00000357214.5

SFPQ-201, Transcript of splicing factor proline and glutamine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFPQ, Length 3,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-201ENST00000357214 PRXQ9BXM0 1461 aa17.54■□□□□ 0.4
SFPQ-201ENST00000357214 ARAP1Q96P48 1450 aa17.52■□□□□ 0.39
SFPQ-201ENST00000357214 CUX1P39880 1505 aa17.51■□□□□ 0.39
SFPQ-201ENST00000357214 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
SFPQ-201ENST00000357214 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
SFPQ-201ENST00000357214 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
SFPQ-201ENST00000357214 IGF1RP08069 1367 aa17.49■□□□□ 0.39
SFPQ-201ENST00000357214 RBM19Q9Y4C8 960 aaKnown RBP17.49■□□□□ 0.39
SFPQ-201ENST00000357214 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
SFPQ-201ENST00000357214 CFTRP13569 1480 aa17.48■□□□□ 0.39
SFPQ-201ENST00000357214 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
SFPQ-201ENST00000357214 TRIM52Q96A61 297 aa17.45■□□□□ 0.38
SFPQ-201ENST00000357214 NEFLP07196 543 aa17.45■□□□□ 0.38
SFPQ-201ENST00000357214 RAB3GAP2Q9H2M9 1393 aa17.44■□□□□ 0.38
SFPQ-201ENST00000357214 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
SFPQ-201ENST00000357214 DEKP35659 375 aaKnown RBP17.44■□□□□ 0.38
SFPQ-201ENST00000357214 TDRD9Q8NDG6 1382 aaKnown RBP17.43■□□□□ 0.38
SFPQ-201ENST00000357214 MTUS2Q5JR59 1369 aa17.42■□□□□ 0.38
SFPQ-201ENST00000357214 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
SFPQ-201ENST00000357214 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
SFPQ-201ENST00000357214 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.41■□□□□ 0.38
SFPQ-201ENST00000357214 FGD5Q6ZNL6 1462 aa17.39■□□□□ 0.37
SFPQ-201ENST00000357214 ANP32CO43423 234 aa17.38■□□□□ 0.37
SFPQ-201ENST00000357214 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
SFPQ-201ENST00000357214 SETD5Q9C0A6 1442 aa17.38■□□□□ 0.37
SFPQ-201ENST00000357214 ZNF777Q9ULD5 760 aaPredicted RBP17.37■□□□□ 0.37
SFPQ-201ENST00000357214 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
SFPQ-201ENST00000357214 FANCD2Q9BXW9 1451 aa17.36■□□□□ 0.37
SFPQ-201ENST00000357214 FKBP8Q14318 412 aa17.36■□□□□ 0.37
SFPQ-201ENST00000357214 FHOD3Q2V2M9 1422 aa17.36■□□□□ 0.37
SFPQ-201ENST00000357214 MYT1LQ9UL68 1186 aa17.35■□□□□ 0.37
SFPQ-201ENST00000357214 POLR3GLQ9BT43 218 aa17.34■□□□□ 0.37
SFPQ-201ENST00000357214 BIVM-ERCC5R4GMW8 1640 aa17.34■□□□□ 0.37
SFPQ-201ENST00000357214 RRBP1Q9P2E9 1410 aaKnown RBP17.34■□□□□ 0.37
SFPQ-201ENST00000357214 RTN4Q9NQC3 1192 aaKnown RBP17.34■□□□□ 0.37
SFPQ-201ENST00000357214 MSH5O43196 834 aa17.31■□□□□ 0.36
SFPQ-201ENST00000357214 EIF5BO60841 1220 aaKnown RBP17.31■□□□□ 0.36
SFPQ-201ENST00000357214 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
SFPQ-201ENST00000357214 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
SFPQ-201ENST00000357214 UBE2Q2Q8WVN8 375 aa17.29■□□□□ 0.36
SFPQ-201ENST00000357214 PHLDB1Q86UU1 1377 aa17.29■□□□□ 0.36
SFPQ-201ENST00000357214 CHMP7Q8WUX9 453 aaPredicted RBP17.28■□□□□ 0.36
SFPQ-201ENST00000357214 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
SFPQ-201ENST00000357214 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
SFPQ-201ENST00000357214 KCNH8Q96L42 1107 aa17.24■□□□□ 0.35
SFPQ-201ENST00000357214 NBR1Q14596 966 aa17.24■□□□□ 0.35
SFPQ-201ENST00000357214 LRRC9Q6ZRR7 1453 aa17.23■□□□□ 0.35
SFPQ-201ENST00000357214 ZNF326Q5BKZ1 582 aaKnown RBP17.21■□□□□ 0.35
SFPQ-201ENST00000357214 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
SFPQ-201ENST00000357214 PPP1R15AO75807 674 aaPredicted RBP17.18■□□□□ 0.34
SFPQ-201ENST00000357214 TIMELESSQ9UNS1 1208 aa17.17■□□□□ 0.34
SFPQ-201ENST00000357214 TIAM1Q13009 1591 aa17.15■□□□□ 0.34
SFPQ-201ENST00000357214 ERICH6BQ5W0A0 696 aa17.11■□□□□ 0.33
SFPQ-201ENST00000357214 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
SFPQ-201ENST00000357214 HNRNPUQ00839 825 aaKnown RBP eCLIP17.11■□□□□ 0.33
SFPQ-201ENST00000357214 CDK11AQ9UQ88 783 aaPredicted RBP17.1■□□□□ 0.33
SFPQ-201ENST00000357214 PKNOX2Q96KN3 472 aa17.09■□□□□ 0.33
SFPQ-201ENST00000357214 IL27Q8NEV9 243 aa17.09■□□□□ 0.33
SFPQ-201ENST00000357214 TOPBP1Q92547 1522 aa17.09■□□□□ 0.33
SFPQ-201ENST00000357214 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
SFPQ-201ENST00000357214 CASKIN1Q8WXD9 1431 aa17.07■□□□□ 0.32
SFPQ-201ENST00000357214 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
SFPQ-201ENST00000357214 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.324e-9■■■□□ 17.1
SFPQ-201ENST00000357214 EIF4G2P78344 907 aaKnown RBP eCLIP17.05■□□□□ 0.32
SFPQ-201ENST00000357214 RTL5Q5HYW3 569 aaPredicted RBP17.04■□□□□ 0.32
SFPQ-201ENST00000357214 FOXD1Q16676 465 aa17.04■□□□□ 0.32
SFPQ-201ENST00000357214 PLEKHG5O94827 1062 aa17.04■□□□□ 0.32
SFPQ-201ENST00000357214 GAPVD1Q14C86 1478 aa17.03■□□□□ 0.32
SFPQ-201ENST00000357214 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
SFPQ-201ENST00000357214 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
SFPQ-201ENST00000357214 PCF11O94913 1555 aaKnown RBP17.02■□□□□ 0.31
SFPQ-201ENST00000357214 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.31
SFPQ-201ENST00000357214 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
SFPQ-201ENST00000357214 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
SFPQ-201ENST00000357214 CCDC18Q5T9S5 1454 aa17.01■□□□□ 0.31
SFPQ-201ENST00000357214 SENP3Q9H4L4 574 aaPredicted RBP17■□□□□ 0.31
SFPQ-201ENST00000357214 FAM9BQ8IZU0 186 aa17■□□□□ 0.31
SFPQ-201ENST00000357214 MAP3K1Q13233 1512 aa17■□□□□ 0.31
SFPQ-201ENST00000357214 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
SFPQ-201ENST00000357214 IRX6P78412 446 aaPredicted RBP16.98■□□□□ 0.31
SFPQ-201ENST00000357214 FANCIQ9NVI1 1328 aa16.98■□□□□ 0.31
SFPQ-201ENST00000357214 HSPA5P11021 654 aaKnown RBP16.97■□□□□ 0.31
SFPQ-201ENST00000357214 WDR97A6NE52 1622 aa16.97■□□□□ 0.31
SFPQ-201ENST00000357214 LAMC3Q9Y6N6 1575 aa16.96■□□□□ 0.31
SFPQ-201ENST00000357214 MPHOSPH9Q99550 1183 aa16.95■□□□□ 0.3
SFPQ-201ENST00000357214 EFCAB5A4FU69 1503 aa16.95■□□□□ 0.3
SFPQ-201ENST00000357214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.36e-8■■■■□ 26.6
SFPQ-201ENST00000357214 MAPKBP1O60336 1514 aa16.95■□□□□ 0.3
SFPQ-201ENST00000357214 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
SFPQ-201ENST00000357214 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
SFPQ-201ENST00000357214 CFDP1Q9UEE9 299 aaPredicted RBP16.94■□□□□ 0.3
SFPQ-201ENST00000357214 MRS2Q9HD23 443 aa16.93■□□□□ 0.3
SFPQ-201ENST00000357214 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
SFPQ-201ENST00000357214 PODXL2Q9NZ53 605 aa16.91■□□□□ 0.3
SFPQ-201ENST00000357214 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
SFPQ-201ENST00000357214 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
SFPQ-201ENST00000357214 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.87■□□□□ 0.29
SFPQ-201ENST00000357214 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
SFPQ-201ENST00000357214 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
SFPQ-201ENST00000357214 HFM1A2PYH4 1435 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms