RNA–Protein interactions for RNA: ENST00000356341.7

PAK1-202, Transcript of p21 (RAC1) activated kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAK1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK1-202ENST00000356341 TOPBP1Q92547 1522 aa16.65■□□□□ 0.26
PAK1-202ENST00000356341 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
PAK1-202ENST00000356341 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
PAK1-202ENST00000356341 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.63■□□□□ 0.25
PAK1-202ENST00000356341 RTN4Q9NQC3 1192 aaKnown RBP16.6■□□□□ 0.25
PAK1-202ENST00000356341 NBR1Q14596 966 aa16.57■□□□□ 0.24
PAK1-202ENST00000356341 NEFLP07196 543 aa16.57■□□□□ 0.24
PAK1-202ENST00000356341 ABCA10Q8WWZ4 1543 aa16.55■□□□□ 0.24
PAK1-202ENST00000356341 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.24
PAK1-202ENST00000356341 IL27Q8NEV9 243 aa16.52■□□□□ 0.23
PAK1-202ENST00000356341 PBRM1Q86U86 1689 aa16.51■□□□□ 0.23
PAK1-202ENST00000356341 POLA1P09884 1462 aaPredicted RBP16.51■□□□□ 0.23
PAK1-202ENST00000356341 TRIM52Q96A61 297 aa16.51■□□□□ 0.23
PAK1-202ENST00000356341 KIF21BO75037 1637 aa16.51■□□□□ 0.23
PAK1-202ENST00000356341 EEA1Q15075 1411 aa16.5■□□□□ 0.23
PAK1-202ENST00000356341 FGD5Q6ZNL6 1462 aa16.5■□□□□ 0.23
PAK1-202ENST00000356341 CUX2O14529 1486 aa16.49■□□□□ 0.23
PAK1-202ENST00000356341 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
PAK1-202ENST00000356341 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
PAK1-202ENST00000356341 CUL7Q14999 1698 aa16.46■□□□□ 0.23
PAK1-202ENST00000356341 UBE2Q2Q8WVN8 375 aa16.46■□□□□ 0.23
PAK1-202ENST00000356341 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
PAK1-202ENST00000356341 MYT1LQ9UL68 1186 aa16.41■□□□□ 0.22
PAK1-202ENST00000356341 IFT140Q96RY7 1462 aa16.4■□□□□ 0.22
PAK1-202ENST00000356341 CDK11AQ9UQ88 783 aaPredicted RBP16.4■□□□□ 0.22
PAK1-202ENST00000356341 PAK3O75914 559 aaPredicted RBP16.37■□□□□ 0.21
PAK1-202ENST00000356341 EIF4G3O43432 1585 aaKnown RBP16.37■□□□□ 0.21
PAK1-202ENST00000356341 ERICH6BQ5W0A0 696 aa16.34■□□□□ 0.21
PAK1-202ENST00000356341 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.2
PAK1-202ENST00000356341 PRXQ9BXM0 1461 aa16.33■□□□□ 0.2
PAK1-202ENST00000356341 CNGB1Q14028 1251 aaPredicted RBP16.32■□□□□ 0.2
PAK1-202ENST00000356341 ADAMTS12P58397 1594 aa16.32■□□□□ 0.2
PAK1-202ENST00000356341 FAM50AQ14320 339 aaKnown RBP16.32■□□□□ 0.2
PAK1-202ENST00000356341 CTTNBP2Q8WZ74 1663 aa16.29■□□□□ 0.2
PAK1-202ENST00000356341 SOGA1O94964 1423 aa16.29■□□□□ 0.2
PAK1-202ENST00000356341 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
PAK1-202ENST00000356341 EIF5BO60841 1220 aaKnown RBP16.27■□□□□ 0.2
PAK1-202ENST00000356341 ERCC6Q03468 1493 aa16.27■□□□□ 0.2
PAK1-202ENST00000356341 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.19
PAK1-202ENST00000356341 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
PAK1-202ENST00000356341 RAD54L2Q9Y4B4 1467 aa16.24■□□□□ 0.19
PAK1-202ENST00000356341 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
PAK1-202ENST00000356341 HIRIP3Q9BW71 556 aaPredicted RBP16.22■□□□□ 0.19
PAK1-202ENST00000356341 TNIKQ9UKE5 1360 aa16.22■□□□□ 0.19
PAK1-202ENST00000356341 CLIP1P30622 1438 aa16.21■□□□□ 0.19
PAK1-202ENST00000356341 RTL5Q5HYW3 569 aaPredicted RBP16.2■□□□□ 0.18
PAK1-202ENST00000356341 P3H3Q8IVL6 736 aa16.18■□□□□ 0.18
PAK1-202ENST00000356341 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
PAK1-202ENST00000356341 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
PAK1-202ENST00000356341 B4GALNT3Q6L9W6 998 aa16.16■□□□□ 0.18
PAK1-202ENST00000356341 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
PAK1-202ENST00000356341 GRIN2BQ13224 1484 aa16.15■□□□□ 0.18
PAK1-202ENST00000356341 IGF1RP08069 1367 aa16.14■□□□□ 0.17
PAK1-202ENST00000356341 PKNOX2Q96KN3 472 aa16.14■□□□□ 0.17
PAK1-202ENST00000356341 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
PAK1-202ENST00000356341 ANP32CO43423 234 aa16.12■□□□□ 0.17
PAK1-202ENST00000356341 GOLGA3Q08378 1498 aa16.12■□□□□ 0.17
PAK1-202ENST00000356341 SHROOM2Q13796 1616 aa16.11■□□□□ 0.17
PAK1-202ENST00000356341 SAMD9Q5K651 1589 aa16.1■□□□□ 0.17
PAK1-202ENST00000356341 CHD1O14646 1710 aa16.1■□□□□ 0.17
PAK1-202ENST00000356341 HNRNPUQ00839 825 aaKnown RBP eCLIP16.08■□□□□ 0.17
PAK1-202ENST00000356341 TIMELESSQ9UNS1 1208 aa16.08■□□□□ 0.16
PAK1-202ENST00000356341 RAPGEF2Q9Y4G8 1499 aa16.07■□□□□ 0.16
PAK1-202ENST00000356341 BRPF3Q9ULD4 1205 aa16.06■□□□□ 0.16
PAK1-202ENST00000356341 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
PAK1-202ENST00000356341 PPP1R15AO75807 674 aaPredicted RBP16.04■□□□□ 0.16
PAK1-202ENST00000356341 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
PAK1-202ENST00000356341 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
PAK1-202ENST00000356341 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.16
PAK1-202ENST00000356341 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.16
PAK1-202ENST00000356341 PLEKHG5O94827 1062 aa16.02■□□□□ 0.15
PAK1-202ENST00000356341 NUP160Q12769 1436 aa16.01■□□□□ 0.15
PAK1-202ENST00000356341 LAS1LQ9Y4W2 734 aaKnown RBP16.01■□□□□ 0.15
PAK1-202ENST00000356341 SNAPC4Q5SXM2 1469 aa16■□□□□ 0.15
PAK1-202ENST00000356341 ZBTB47Q9UFB7 747 aaPredicted RBP16■□□□□ 0.15
PAK1-202ENST00000356341 EFCAB5A4FU69 1503 aa15.99■□□□□ 0.15
PAK1-202ENST00000356341 GRIN2AQ12879 1464 aa15.99■□□□□ 0.15
PAK1-202ENST00000356341 UGGT2Q9NYU1 1516 aa15.99■□□□□ 0.15
PAK1-202ENST00000356341 IPO9Q96P70 1041 aaKnown RBP15.98■□□□□ 0.15
PAK1-202ENST00000356341 CCER2I3L3R5 266 aa15.98■□□□□ 0.15
PAK1-202ENST00000356341 SIN3AQ96ST3 1273 aa15.98■□□□□ 0.15
PAK1-202ENST00000356341 AQRO60306 1485 aaKnown RBP eCLIP15.97■□□□□ 0.15
PAK1-202ENST00000356341 ANP32AP39687 249 aaKnown RBP15.97■□□□□ 0.15
PAK1-202ENST00000356341 KANK4Q5T7N3 995 aaPredicted RBP15.96■□□□□ 0.15
PAK1-202ENST00000356341 NEFMP07197 916 aa15.95■□□□□ 0.14
PAK1-202ENST00000356341 IQGAP2Q13576 1575 aa15.93■□□□□ 0.14
PAK1-202ENST00000356341 NPM2Q86SE8 214 aaKnown RBP15.93■□□□□ 0.14
PAK1-202ENST00000356341 CARMIL1Q5VZK9 1371 aa15.93■□□□□ 0.14
PAK1-202ENST00000356341 WASHC2AQ641Q2 1341 aa15.92■□□□□ 0.14
PAK1-202ENST00000356341 TDRD9Q8NDG6 1382 aaKnown RBP15.9■□□□□ 0.14
PAK1-202ENST00000356341 VPS8Q8N3P4 1428 aa15.9■□□□□ 0.14
PAK1-202ENST00000356341 ARID3CA6NKF2 412 aa15.89■□□□□ 0.13
PAK1-202ENST00000356341 KIAA0586Q9BVV6 1533 aa15.87■□□□□ 0.13
PAK1-202ENST00000356341 LRRIQ1Q96JM4 1722 aa15.87■□□□□ 0.13
PAK1-202ENST00000356341 KIAA0556O60303 1618 aa15.86■□□□□ 0.13
PAK1-202ENST00000356341 TONSLQ96HA7 1378 aa15.85■□□□□ 0.13
PAK1-202ENST00000356341 C11orf95C9JLR9 678 aaPredicted RBP15.84■□□□□ 0.13
PAK1-202ENST00000356341 CFAP43Q8NDM7 1665 aa15.84■□□□□ 0.13
PAK1-202ENST00000356341 ZNF326Q5BKZ1 582 aaKnown RBP15.84■□□□□ 0.13
PAK1-202ENST00000356341 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms