RNA–Protein interactions for RNA: ENST00000355693.4

COA4-201, Transcript of cytochrome c oxidase assembly factor 4 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COA4, Length 960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA4-201ENST00000355693 SPDYE6P0CI01 402 aa18.13■□□□□ 0.49
COA4-201ENST00000355693 SPDYE2Q495Y8 402 aa18.13■□□□□ 0.49
COA4-201ENST00000355693 FXR2P51116 673 aaKnown RBP eCLIP18.12■□□□□ 0.49
COA4-201ENST00000355693 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
COA4-201ENST00000355693 HAX1O00165 279 aa18.06■□□□□ 0.48
COA4-201ENST00000355693 WDR62O43379 1518 aa18.05■□□□□ 0.48
COA4-201ENST00000355693 CUX2O14529 1486 aa18.04■□□□□ 0.48
COA4-201ENST00000355693 URB2Q14146 1524 aaKnown RBP18■□□□□ 0.47
COA4-201ENST00000355693 MKRN4PQ13434 485 aaPredicted RBP17.98■□□□□ 0.47
COA4-201ENST00000355693 DNMBPQ6XZF7 1577 aa17.92■□□□□ 0.46
COA4-201ENST00000355693 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
COA4-201ENST00000355693 CLEC11AQ9Y240 323 aa17.91■□□□□ 0.46
COA4-201ENST00000355693 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
COA4-201ENST00000355693 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.45
COA4-201ENST00000355693 CUX1P39880 1505 aa17.84■□□□□ 0.45
COA4-201ENST00000355693 ABCC8Q09428 1581 aa17.83■□□□□ 0.45
COA4-201ENST00000355693 SSUH2Q9Y2M2 353 aa17.83■□□□□ 0.44
COA4-201ENST00000355693 PRKAR2AP13861 404 aaKnown RBP17.81■□□□□ 0.44
COA4-201ENST00000355693 SYNJ1O43426 1573 aa17.77■□□□□ 0.44
COA4-201ENST00000355693 BIVM-ERCC5R4GMW8 1640 aa17.76■□□□□ 0.43
COA4-201ENST00000355693 EVX2Q03828 476 aa17.76■□□□□ 0.43
COA4-201ENST00000355693 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
COA4-201ENST00000355693 FGD5Q6ZNL6 1462 aa17.75■□□□□ 0.43
COA4-201ENST00000355693 TARBP1Q13395 1621 aaKnown RBP17.73■□□□□ 0.43
COA4-201ENST00000355693 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
COA4-201ENST00000355693 IFT140Q96RY7 1462 aa17.72■□□□□ 0.43
COA4-201ENST00000355693 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
COA4-201ENST00000355693 WDR97A6NE52 1622 aa17.71■□□□□ 0.43
COA4-201ENST00000355693 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
COA4-201ENST00000355693 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
COA4-201ENST00000355693 ZNF608Q9ULD9 1512 aaPredicted RBP17.67■□□□□ 0.42
COA4-201ENST00000355693 SOGA1O94964 1423 aa17.61■□□□□ 0.41
COA4-201ENST00000355693 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
COA4-201ENST00000355693 PBRM1Q86U86 1689 aa17.57■□□□□ 0.4
COA4-201ENST00000355693 C19orf67A6NJJ6 358 aa17.56■□□□□ 0.4
COA4-201ENST00000355693 PRR29P0C7W0 189 aa17.56■□□□□ 0.4
COA4-201ENST00000355693 CHADLQ6NUI6 762 aa17.56■□□□□ 0.4
COA4-201ENST00000355693 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
COA4-201ENST00000355693 ABCA5Q8WWZ7 1642 aa17.56■□□□□ 0.4
COA4-201ENST00000355693 ABCA10Q8WWZ4 1543 aa17.55■□□□□ 0.4
COA4-201ENST00000355693 AQRO60306 1485 aaKnown RBP eCLIP17.54■□□□□ 0.41e-6■■□□□ 14.5
COA4-201ENST00000355693 TDRD9Q8NDG6 1382 aaKnown RBP17.51■□□□□ 0.39
COA4-201ENST00000355693 CHD1O14646 1710 aa17.47■□□□□ 0.39
COA4-201ENST00000355693 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
COA4-201ENST00000355693 SNAPC4Q5SXM2 1469 aa17.45■□□□□ 0.38
COA4-201ENST00000355693 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
COA4-201ENST00000355693 ADAMTS12P58397 1594 aa17.4■□□□□ 0.38
COA4-201ENST00000355693 MAGI1Q96QZ7 1491 aaPredicted RBP17.38■□□□□ 0.37
COA4-201ENST00000355693 GABBR2O75899 941 aa17.37■□□□□ 0.37
COA4-201ENST00000355693 ERICH3Q5RHP9 1530 aa17.35■□□□□ 0.37
COA4-201ENST00000355693 SYNJ2O15056 1496 aa17.31■□□□□ 0.36
COA4-201ENST00000355693 KIF27Q86VH2 1401 aa17.3■□□□□ 0.36
COA4-201ENST00000355693 TRIM41Q8WV44 630 aa17.3■□□□□ 0.36
COA4-201ENST00000355693 CUL7Q14999 1698 aa17.29■□□□□ 0.36
COA4-201ENST00000355693 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
COA4-201ENST00000355693 FARP1Q9Y4F1 1045 aaPredicted RBP17.26■□□□□ 0.35
COA4-201ENST00000355693 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
COA4-201ENST00000355693 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
COA4-201ENST00000355693 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
COA4-201ENST00000355693 CD44P16070 742 aaKnown RBP17.23■□□□□ 0.35
COA4-201ENST00000355693 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.34
COA4-201ENST00000355693 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
COA4-201ENST00000355693 CHMP7Q8WUX9 453 aaPredicted RBP17.19■□□□□ 0.34
COA4-201ENST00000355693 IGF1RP08069 1367 aa17.16■□□□□ 0.34
COA4-201ENST00000355693 NUP160Q12769 1436 aa17.13■□□□□ 0.33
COA4-201ENST00000355693 RIMBP3CA6NJZ7 1639 aa17.11■□□□□ 0.33
COA4-201ENST00000355693 RIMBP3BA6NNM3 1639 aa17.11■□□□□ 0.33
COA4-201ENST00000355693 RIMBP3Q9UFD9 1639 aa17.11■□□□□ 0.33
COA4-201ENST00000355693 STAG3Q9UJ98 1225 aa17.1■□□□□ 0.33
COA4-201ENST00000355693 CARMIL1Q5VZK9 1371 aa17.09■□□□□ 0.33
COA4-201ENST00000355693 ARHGEF11O15085 1522 aa17.08■□□□□ 0.32
COA4-201ENST00000355693 LHX8Q68G74 356 aa17.07■□□□□ 0.32
COA4-201ENST00000355693 SPDYE4A6NLX3 237 aa17.06■□□□□ 0.32
COA4-201ENST00000355693 SHROOM2Q13796 1616 aa17.06■□□□□ 0.32
COA4-201ENST00000355693 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
COA4-201ENST00000355693 EEA1Q15075 1411 aa17.05■□□□□ 0.32
COA4-201ENST00000355693 CTTNBP2Q8WZ74 1663 aa17.05■□□□□ 0.32
COA4-201ENST00000355693 CREBZFQ9NS37 354 aa17.03■□□□□ 0.32
COA4-201ENST00000355693 PRXQ9BXM0 1461 aa17.02■□□□□ 0.32
COA4-201ENST00000355693 CLCN6P51797 869 aa17.01■□□□□ 0.31
COA4-201ENST00000355693 ERCC6L2Q5T890 1561 aa17.01■□□□□ 0.31
COA4-201ENST00000355693 FAM9AQ8IZU1 332 aaPredicted RBP17■□□□□ 0.31
COA4-201ENST00000355693 IQGAP2Q13576 1575 aa16.99■□□□□ 0.31
COA4-201ENST00000355693 KIF21BO75037 1637 aa16.99■□□□□ 0.31
COA4-201ENST00000355693 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
COA4-201ENST00000355693 KIAA0586Q9BVV6 1533 aa16.96■□□□□ 0.31
COA4-201ENST00000355693 ZRANB1Q9UGI0 708 aa16.96■□□□□ 0.31
COA4-201ENST00000355693 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
COA4-201ENST00000355693 ZNF579Q8NAF0 562 aaKnown RBP16.92■□□□□ 0.3
COA4-201ENST00000355693 DCBLD2Q96PD2 775 aa16.9■□□□□ 0.3
COA4-201ENST00000355693 PRG4Q92954 1404 aaPredicted RBP16.89■□□□□ 0.29
COA4-201ENST00000355693 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
COA4-201ENST00000355693 UGGT2Q9NYU1 1516 aa16.85■□□□□ 0.29
COA4-201ENST00000355693 JPH4Q96JJ6 628 aa16.84■□□□□ 0.29
COA4-201ENST00000355693 GOLGA3Q08378 1498 aa16.84■□□□□ 0.29
COA4-201ENST00000355693 DISP1Q96F81 1524 aa16.81■□□□□ 0.28
COA4-201ENST00000355693 PAK3O75914 559 aaPredicted RBP16.8■□□□□ 0.28
COA4-201ENST00000355693 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
COA4-201ENST00000355693 SAMD9Q5K651 1589 aa16.77■□□□□ 0.28
COA4-201ENST00000355693 CARMIL2Q6F5E8 1435 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms