RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
CAPN9-202ENST00000354537 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
CAPN9-202ENST00000354537 CARMIL1Q5VZK9 1371 aa16.28■□□□□ 0.2
CAPN9-202ENST00000354537 CCER2I3L3R5 266 aa16.25■□□□□ 0.19
CAPN9-202ENST00000354537 PHLDB1Q86UU1 1377 aa16.25■□□□□ 0.19
CAPN9-202ENST00000354537 WDR97A6NE52 1622 aa16.24■□□□□ 0.19
CAPN9-202ENST00000354537 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
CAPN9-202ENST00000354537 ITGAEP38570 1179 aa16.23■□□□□ 0.19
CAPN9-202ENST00000354537 AQRO60306 1485 aaKnown RBP eCLIP16.23■□□□□ 0.19
CAPN9-202ENST00000354537 CADPSQ9ULU8 1353 aa16.2■□□□□ 0.18
CAPN9-202ENST00000354537 EFCAB5A4FU69 1503 aa16.2■□□□□ 0.18
CAPN9-202ENST00000354537 ANP32EQ9BTT0 268 aa16.2■□□□□ 0.18
CAPN9-202ENST00000354537 FYCO1Q9BQS8 1478 aa16.2■□□□□ 0.18
CAPN9-202ENST00000354537 FGD5Q6ZNL6 1462 aa16.19■□□□□ 0.18
CAPN9-202ENST00000354537 PCF11O94913 1555 aaKnown RBP16.18■□□□□ 0.18
CAPN9-202ENST00000354537 CASKIN1Q8WXD9 1431 aa16.17■□□□□ 0.18
CAPN9-202ENST00000354537 KCNH8Q96L42 1107 aa16.17■□□□□ 0.18
CAPN9-202ENST00000354537 DDX10Q13206 875 aaKnown RBP16.16■□□□□ 0.18
CAPN9-202ENST00000354537 SIN3AQ96ST3 1273 aa16.14■□□□□ 0.17
CAPN9-202ENST00000354537 FAM50AQ14320 339 aaKnown RBP16.13■□□□□ 0.17
CAPN9-202ENST00000354537 ANP32CO43423 234 aa16.12■□□□□ 0.17
CAPN9-202ENST00000354537 NEFLP07196 543 aa16.11■□□□□ 0.17
CAPN9-202ENST00000354537 FKBP8Q14318 412 aa16.11■□□□□ 0.17
CAPN9-202ENST00000354537 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
CAPN9-202ENST00000354537 ABCA10Q8WWZ4 1543 aa16.09■□□□□ 0.17
CAPN9-202ENST00000354537 CUL7Q14999 1698 aa16.08■□□□□ 0.16
CAPN9-202ENST00000354537 FMN1Q68DA7 1419 aa16.07■□□□□ 0.16
CAPN9-202ENST00000354537 FGD6Q6ZV73 1430 aa16.07■□□□□ 0.16
CAPN9-202ENST00000354537 UACAQ9BZF9 1416 aa16.07■□□□□ 0.16
CAPN9-202ENST00000354537 HFM1A2PYH4 1435 aa16.06■□□□□ 0.16
CAPN9-202ENST00000354537 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
CAPN9-202ENST00000354537 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
CAPN9-202ENST00000354537 FHOD3Q2V2M9 1422 aa16.04■□□□□ 0.16
CAPN9-202ENST00000354537 CTTNBP2Q8WZ74 1663 aa16.03■□□□□ 0.16
CAPN9-202ENST00000354537 CCDC18Q5T9S5 1454 aa16.03■□□□□ 0.16
CAPN9-202ENST00000354537 SNAPC4Q5SXM2 1469 aa16.01■□□□□ 0.15
CAPN9-202ENST00000354537 FANCD2Q9BXW9 1451 aa16.01■□□□□ 0.15
CAPN9-202ENST00000354537 PTPN23Q9H3S7 1636 aa16.01■□□□□ 0.15
CAPN9-202ENST00000354537 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
CAPN9-202ENST00000354537 BCANQ96GW7 911 aa15.99■□□□□ 0.15
CAPN9-202ENST00000354537 RBM19Q9Y4C8 960 aaKnown RBP15.97■□□□□ 0.15
CAPN9-202ENST00000354537 ERICH6BQ5W0A0 696 aa15.97■□□□□ 0.15
CAPN9-202ENST00000354537 SAMD9Q5K651 1589 aa15.96■□□□□ 0.15
CAPN9-202ENST00000354537 POLA1P09884 1462 aaPredicted RBP15.96■□□□□ 0.15
CAPN9-202ENST00000354537 P3H3Q8IVL6 736 aa15.96■□□□□ 0.15
CAPN9-202ENST00000354537 NAIPQ13075 1403 aa15.96■□□□□ 0.15
CAPN9-202ENST00000354537 TOPBP1Q92547 1522 aa15.95■□□□□ 0.14
CAPN9-202ENST00000354537 MYOM3Q5VTT5 1437 aa15.95■□□□□ 0.14
CAPN9-202ENST00000354537 MTUS2Q5JR59 1369 aa15.94■□□□□ 0.14
CAPN9-202ENST00000354537 KDM5BQ9UGL1 1544 aa15.94■□□□□ 0.14
CAPN9-202ENST00000354537 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
CAPN9-202ENST00000354537 ATP1B4Q9UN42 357 aaPredicted RBP15.94■□□□□ 0.14
CAPN9-202ENST00000354537 TRIM52Q96A61 297 aa15.93■□□□□ 0.14
CAPN9-202ENST00000354537 GRIN2BQ13224 1484 aa15.92■□□□□ 0.14
CAPN9-202ENST00000354537 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
CAPN9-202ENST00000354537 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
CAPN9-202ENST00000354537 SUPT6HQ7KZ85 1726 aaKnown RBP15.92■□□□□ 0.14
CAPN9-202ENST00000354537 AKNAQ7Z591 1439 aa15.92■□□□□ 0.14
CAPN9-202ENST00000354537 NCOA2Q15596 1464 aa15.92■□□□□ 0.14
CAPN9-202ENST00000354537 ARHGEF11O15085 1522 aa15.91■□□□□ 0.14
CAPN9-202ENST00000354537 KIF21AQ7Z4S6 1674 aa15.9■□□□□ 0.14
CAPN9-202ENST00000354537 HIRIP3Q9BW71 556 aaPredicted RBP15.89■□□□□ 0.13
CAPN9-202ENST00000354537 TCOF1Q13428 1488 aaKnown RBP15.89■□□□□ 0.13
CAPN9-202ENST00000354537 UGGT2Q9NYU1 1516 aa15.88■□□□□ 0.13
CAPN9-202ENST00000354537 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
CAPN9-202ENST00000354537 HECW1Q76N89 1606 aa15.86■□□□□ 0.13
CAPN9-202ENST00000354537 GCC2Q8IWJ2 1684 aa15.86■□□□□ 0.13
CAPN9-202ENST00000354537 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
CAPN9-202ENST00000354537 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
CAPN9-202ENST00000354537 CDK11AQ9UQ88 783 aaPredicted RBP15.82■□□□□ 0.12
CAPN9-202ENST00000354537 HNRNPUQ00839 825 aaKnown RBP eCLIP15.81■□□□□ 0.12
CAPN9-202ENST00000354537 CNTLNQ9NXG0 1405 aa15.81■□□□□ 0.12
CAPN9-202ENST00000354537 WASHC2AQ641Q2 1341 aa15.8■□□□□ 0.12
CAPN9-202ENST00000354537 MIA2Q96PC5 1412 aa15.8■□□□□ 0.12
CAPN9-202ENST00000354537 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
CAPN9-202ENST00000354537 EIF4G2P78344 907 aaKnown RBP eCLIP15.79■□□□□ 0.12
CAPN9-202ENST00000354537 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
CAPN9-202ENST00000354537 DENND4BO75064 1496 aaPredicted RBP15.78■□□□□ 0.12
CAPN9-202ENST00000354537 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
CAPN9-202ENST00000354537 PPP4R2Q9NY27 417 aa15.77■□□□□ 0.11
CAPN9-202ENST00000354537 GAPVD1Q14C86 1478 aa15.77■□□□□ 0.11
CAPN9-202ENST00000354537 NCOA1Q15788 1441 aa15.76■□□□□ 0.11
CAPN9-202ENST00000354537 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
CAPN9-202ENST00000354537 BCL11AQ9H165 835 aa15.75■□□□□ 0.11
CAPN9-202ENST00000354537 MAGI3Q5TCQ9 1506 aa15.74■□□□□ 0.11
CAPN9-202ENST00000354537 MSH5O43196 834 aa15.73■□□□□ 0.11
CAPN9-202ENST00000354537 MYT1LQ9UL68 1186 aa15.73■□□□□ 0.11
CAPN9-202ENST00000354537 ROCK1Q13464 1354 aa15.72■□□□□ 0.11
CAPN9-202ENST00000354537 CCDC7Q96M83 1385 aa15.72■□□□□ 0.11
CAPN9-202ENST00000354537 ZBED9Q6R2W3 1325 aa15.71■□□□□ 0.11
CAPN9-202ENST00000354537 MPHOSPH9Q99550 1183 aa15.71■□□□□ 0.1
CAPN9-202ENST00000354537 PRKRIP1Q9H875 184 aaPredicted RBP15.7■□□□□ 0.1
CAPN9-202ENST00000354537 NESP48681 1621 aa15.69■□□□□ 0.1
CAPN9-202ENST00000354537 POLR1AO95602 1720 aaPredicted RBP15.68■□□□□ 0.1
CAPN9-202ENST00000354537 RPRD2Q5VT52 1461 aaKnown RBP15.68■□□□□ 0.1
CAPN9-202ENST00000354537 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
CAPN9-202ENST00000354537 RRP7BPQ9NSQ0 103 aa15.68■□□□□ 0.1
CAPN9-202ENST00000354537 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
CAPN9-202ENST00000354537 L3MBTL2Q969R5 705 aa15.67■□□□□ 0.1
CAPN9-202ENST00000354537 ANKRD30BQ9BXX2 1392 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms