RNA–Protein interactions for RNA: ENST00000348403.9

STRBP-201, Transcript of spermatid perinuclear RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STRBP, Length 3,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRBP-201ENST00000348403 HIRIP3Q9BW71 556 aaPredicted RBP27.36■■□□□ 1.97
STRBP-201ENST00000348403 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
STRBP-201ENST00000348403 SIN3AQ96ST3 1273 aa27.35■■□□□ 1.97
STRBP-201ENST00000348403 CUX2O14529 1486 aa27.33■■□□□ 1.97
STRBP-201ENST00000348403 TRIM52Q96A61 297 aa27.32■■□□□ 1.96
STRBP-201ENST00000348403 NEFLP07196 543 aa27.31■■□□□ 1.96
STRBP-201ENST00000348403 MAPKBP1O60336 1514 aa27.28■■□□□ 1.96
STRBP-201ENST00000348403 LAMC3Q9Y6N6 1575 aa27.28■■□□□ 1.96
STRBP-201ENST00000348403 RBM19Q9Y4C8 960 aaKnown RBP27.26■■□□□ 1.96
STRBP-201ENST00000348403 ARHGAP35Q9NRY4 1499 aa27.23■■□□□ 1.95
STRBP-201ENST00000348403 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
STRBP-201ENST00000348403 FAM50AQ14320 339 aaKnown RBP27.22■■□□□ 1.95
STRBP-201ENST00000348403 FGD5Q6ZNL6 1462 aa27.21■■□□□ 1.95
STRBP-201ENST00000348403 PDS5BQ9NTI5 1447 aa27.2■■□□□ 1.94
STRBP-201ENST00000348403 KIF27Q86VH2 1401 aa27.19■■□□□ 1.94
STRBP-201ENST00000348403 SETD5Q9C0A6 1442 aa27.17■■□□□ 1.94
STRBP-201ENST00000348403 PPP1R15AO75807 674 aaPredicted RBP27.16■■□□□ 1.94
STRBP-201ENST00000348403 ANP32CO43423 234 aa27.13■■□□□ 1.93
STRBP-201ENST00000348403 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
STRBP-201ENST00000348403 ATP1B4Q9UN42 357 aaPredicted RBP27.11■■□□□ 1.93
STRBP-201ENST00000348403 KIF21AQ7Z4S6 1674 aa27.1■■□□□ 1.93
STRBP-201ENST00000348403 RAD54L2Q9Y4B4 1467 aa27.1■■□□□ 1.93
STRBP-201ENST00000348403 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
STRBP-201ENST00000348403 URB2Q14146 1524 aaKnown RBP27.08■■□□□ 1.93
STRBP-201ENST00000348403 PHLDB1Q86UU1 1377 aa27.05■■□□□ 1.92
STRBP-201ENST00000348403 POLA1P09884 1462 aaPredicted RBP27.03■■□□□ 1.92
STRBP-201ENST00000348403 P3H3Q8IVL6 736 aa27.03■■□□□ 1.92
STRBP-201ENST00000348403 CCER2I3L3R5 266 aa27.01■■□□□ 1.91
STRBP-201ENST00000348403 TIAM1Q13009 1591 aa27■■□□□ 1.91
STRBP-201ENST00000348403 IRX6P78412 446 aaPredicted RBP26.99■■□□□ 1.91
STRBP-201ENST00000348403 MSH5O43196 834 aa26.97■■□□□ 1.91
STRBP-201ENST00000348403 LRRC9Q6ZRR7 1453 aa26.95■■□□□ 1.9
STRBP-201ENST00000348403 IGF1RP08069 1367 aa26.93■■□□□ 1.9
STRBP-201ENST00000348403 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
STRBP-201ENST00000348403 HNRNPUQ00839 825 aaKnown RBP eCLIP26.88■■□□□ 1.892e-12■□□□□ 11
STRBP-201ENST00000348403 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
STRBP-201ENST00000348403 TIMELESSQ9UNS1 1208 aa26.87■■□□□ 1.89
STRBP-201ENST00000348403 TONSLQ96HA7 1378 aa26.85■■□□□ 1.89
STRBP-201ENST00000348403 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
STRBP-201ENST00000348403 ABCA10Q8WWZ4 1543 aa26.83■■□□□ 1.89
STRBP-201ENST00000348403 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
STRBP-201ENST00000348403 ERICH6Q7L0X2 663 aa26.81■■□□□ 1.88
STRBP-201ENST00000348403 MAP3K1Q13233 1512 aa26.81■■□□□ 1.88
STRBP-201ENST00000348403 CDK11AQ9UQ88 783 aaPredicted RBP26.8■■□□□ 1.88
STRBP-201ENST00000348403 FHAD1B1AJZ9 1412 aa26.72■■□□□ 1.87
STRBP-201ENST00000348403 PCF11O94913 1555 aaKnown RBP26.71■■□□□ 1.87
STRBP-201ENST00000348403 PRKCSHP14314 528 aaPredicted RBP26.7■■□□□ 1.86
STRBP-201ENST00000348403 FHOD3Q2V2M9 1422 aa26.68■■□□□ 1.86
STRBP-201ENST00000348403 FANCIQ9NVI1 1328 aa26.67■■□□□ 1.86
STRBP-201ENST00000348403 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
STRBP-201ENST00000348403 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.866e-6■■■■□ 25.1
STRBP-201ENST00000348403 CFAP43Q8NDM7 1665 aa26.62■■□□□ 1.85
STRBP-201ENST00000348403 TARBP1Q13395 1621 aaKnown RBP26.61■■□□□ 1.85
STRBP-201ENST00000348403 CCDC18Q5T9S5 1454 aa26.61■■□□□ 1.85
STRBP-201ENST00000348403 WDR62O43379 1518 aa26.57■■□□□ 1.84
STRBP-201ENST00000348403 CCDC184Q52MB2 194 aa26.57■■□□□ 1.84
STRBP-201ENST00000348403 ABCA5Q8WWZ7 1642 aa26.56■■□□□ 1.84
STRBP-201ENST00000348403 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
STRBP-201ENST00000348403 HSPA5P11021 654 aaKnown RBP26.54■■□□□ 1.84
STRBP-201ENST00000348403 WASHC2AQ641Q2 1341 aa26.54■■□□□ 1.84
STRBP-201ENST00000348403 B4GALNT3Q6L9W6 998 aa26.54■■□□□ 1.84
STRBP-201ENST00000348403 FGD6Q6ZV73 1430 aa26.53■■□□□ 1.84
STRBP-201ENST00000348403 PTPRKQ15262 1439 aa26.53■■□□□ 1.84
STRBP-201ENST00000348403 FAM9BQ8IZU0 186 aa26.53■■□□□ 1.84
STRBP-201ENST00000348403 PPP4R2Q9NY27 417 aa26.52■■□□□ 1.84
STRBP-201ENST00000348403 UACAQ9BZF9 1416 aa26.51■■□□□ 1.83
STRBP-201ENST00000348403 MTUS2Q5JR59 1369 aa26.48■■□□□ 1.83
STRBP-201ENST00000348403 THOC2Q8NI27 1593 aaKnown RBP26.48■■□□□ 1.83
STRBP-201ENST00000348403 IFT140Q96RY7 1462 aa26.48■■□□□ 1.83
STRBP-201ENST00000348403 CUL7Q14999 1698 aa26.48■■□□□ 1.83
STRBP-201ENST00000348403 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.48■■□□□ 1.833e-8■■□□□ 12.6
STRBP-201ENST00000348403 FYCO1Q9BQS8 1478 aa26.47■■□□□ 1.83
STRBP-201ENST00000348403 CASKIN1Q8WXD9 1431 aa26.45■■□□□ 1.83
STRBP-201ENST00000348403 HFM1A2PYH4 1435 aa26.45■■□□□ 1.82
STRBP-201ENST00000348403 RRP7BPQ9NSQ0 103 aa26.44■■□□□ 1.82
STRBP-201ENST00000348403 CHIC2Q9UKJ5 165 aa26.44■■□□□ 1.82
STRBP-201ENST00000348403 PTPN23Q9H3S7 1636 aa26.42■■□□□ 1.82
STRBP-201ENST00000348403 NAIPQ13075 1403 aa26.4■■□□□ 1.82
STRBP-201ENST00000348403 MRS2Q9HD23 443 aa26.4■■□□□ 1.82
STRBP-201ENST00000348403 EIF4G2P78344 907 aaKnown RBP eCLIP26.4■■□□□ 1.824e-13■■■□□ 15.4
STRBP-201ENST00000348403 PBRM1Q86U86 1689 aa26.39■■□□□ 1.81
STRBP-201ENST00000348403 KDM5BQ9UGL1 1544 aa26.38■■□□□ 1.81
STRBP-201ENST00000348403 DEKP35659 375 aaKnown RBP26.37■■□□□ 1.81
STRBP-201ENST00000348403 CNGB1Q14028 1251 aaPredicted RBP26.37■■□□□ 1.81
STRBP-201ENST00000348403 ERICH6BQ5W0A0 696 aa26.37■■□□□ 1.81
STRBP-201ENST00000348403 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
STRBP-201ENST00000348403 FBLN2P98095 1184 aa26.36■■□□□ 1.81
STRBP-201ENST00000348403 C11orf95C9JLR9 678 aaPredicted RBP26.35■■□□□ 1.81
STRBP-201ENST00000348403 NBR1Q14596 966 aa26.35■■□□□ 1.81
STRBP-201ENST00000348403 PRKRIP1Q9H875 184 aaPredicted RBP26.33■■□□□ 1.81
STRBP-201ENST00000348403 FOXD1Q16676 465 aa26.31■■□□□ 1.8
STRBP-201ENST00000348403 FMN1Q68DA7 1419 aa26.31■■□□□ 1.8
STRBP-201ENST00000348403 CNTLNQ9NXG0 1405 aa26.31■■□□□ 1.8
STRBP-201ENST00000348403 EIF4G3O43432 1585 aaKnown RBP26.3■■□□□ 1.8
STRBP-201ENST00000348403 EFCAB5A4FU69 1503 aa26.29■■□□□ 1.8
STRBP-201ENST00000348403 SNAPC4Q5SXM2 1469 aa26.28■■□□□ 1.8
STRBP-201ENST00000348403 NCOA2Q15596 1464 aa26.28■■□□□ 1.8
STRBP-201ENST00000348403 SENP3-EIF4A1A0A087X0R7 540 aa26.27■■□□□ 1.8
STRBP-201ENST00000348403 L3MBTL2Q969R5 705 aa26.27■■□□□ 1.8
STRBP-201ENST00000348403 CTTNBP2Q8WZ74 1663 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms