RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 PHLDB1Q86UU1 1377 aa16.96■□□□□ 0.31
APP-201ENST00000346798 SETD5Q9C0A6 1442 aa16.94■□□□□ 0.3
APP-201ENST00000346798 FGD5Q6ZNL6 1462 aa16.91■□□□□ 0.3
APP-201ENST00000346798 MAPKBP1O60336 1514 aa16.9■□□□□ 0.3
APP-201ENST00000346798 MYT1Q01538 1121 aa16.9■□□□□ 0.3
APP-201ENST00000346798 TIAM1Q13009 1591 aa16.9■□□□□ 0.3
APP-201ENST00000346798 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
APP-201ENST00000346798 LRRC9Q6ZRR7 1453 aa16.89■□□□□ 0.29
APP-201ENST00000346798 FHOD3Q2V2M9 1422 aa16.89■□□□□ 0.29
APP-201ENST00000346798 TRIM52Q96A61 297 aa16.87■□□□□ 0.29
APP-201ENST00000346798 WDR97A6NE52 1622 aa16.86■□□□□ 0.29
APP-201ENST00000346798 FKBP8Q14318 412 aa16.86■□□□□ 0.29
APP-201ENST00000346798 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
APP-201ENST00000346798 TSHZ2Q9NRE2 1034 aa16.83■□□□□ 0.28
APP-201ENST00000346798 FHAD1B1AJZ9 1412 aa16.81■□□□□ 0.28
APP-201ENST00000346798 PCF11O94913 1555 aaKnown RBP16.79■□□□□ 0.28
APP-201ENST00000346798 ANP32CO43423 234 aa16.78■□□□□ 0.28
APP-201ENST00000346798 PPP1R15AO75807 674 aaPredicted RBP16.77■□□□□ 0.27
APP-201ENST00000346798 FANCD2Q9BXW9 1451 aa16.75■□□□□ 0.27
APP-201ENST00000346798 TONSLQ96HA7 1378 aa16.75■□□□□ 0.27
APP-201ENST00000346798 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
APP-201ENST00000346798 NEFLP07196 543 aa16.74■□□□□ 0.27
APP-201ENST00000346798 MTUS2Q5JR59 1369 aa16.73■□□□□ 0.27
APP-201ENST00000346798 CHIC2Q9UKJ5 165 aa16.72■□□□□ 0.27
APP-201ENST00000346798 MAP3K1Q13233 1512 aa16.72■□□□□ 0.27
APP-201ENST00000346798 NESP48681 1621 aa16.7■□□□□ 0.26
APP-201ENST00000346798 RRP7BPQ9NSQ0 103 aa16.69■□□□□ 0.26
APP-201ENST00000346798 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
APP-201ENST00000346798 PRDM2Q13029 1718 aa16.68■□□□□ 0.26
APP-201ENST00000346798 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
APP-201ENST00000346798 FGD6Q6ZV73 1430 aa16.65■□□□□ 0.26
APP-201ENST00000346798 CASKIN1Q8WXD9 1431 aa16.64■□□□□ 0.25
APP-201ENST00000346798 CFAP43Q8NDM7 1665 aa16.64■□□□□ 0.25
APP-201ENST00000346798 CC2D2AQ9P2K1 1620 aa16.64■□□□□ 0.25
APP-201ENST00000346798 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
APP-201ENST00000346798 TIMELESSQ9UNS1 1208 aa16.64■□□□□ 0.25
APP-201ENST00000346798 CCDC18Q5T9S5 1454 aa16.63■□□□□ 0.25
APP-201ENST00000346798 FYCO1Q9BQS8 1478 aa16.63■□□□□ 0.25
APP-201ENST00000346798 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
APP-201ENST00000346798 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
APP-201ENST00000346798 HNRNPUQ00839 825 aaKnown RBP eCLIP16.61■□□□□ 0.25
APP-201ENST00000346798 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
APP-201ENST00000346798 CCER2I3L3R5 266 aa16.59■□□□□ 0.25
APP-201ENST00000346798 CNGB1Q14028 1251 aaPredicted RBP16.58■□□□□ 0.25
APP-201ENST00000346798 ABCA10Q8WWZ4 1543 aa16.58■□□□□ 0.25
APP-201ENST00000346798 FOXD1Q16676 465 aa16.58■□□□□ 0.24
APP-201ENST00000346798 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
APP-201ENST00000346798 ANP32EQ9BTT0 268 aa16.54■□□□□ 0.24
APP-201ENST00000346798 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
APP-201ENST00000346798 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.24
APP-201ENST00000346798 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
APP-201ENST00000346798 UACAQ9BZF9 1416 aa16.54■□□□□ 0.24
APP-201ENST00000346798 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
APP-201ENST00000346798 HSPA5P11021 654 aaKnown RBP16.53■□□□□ 0.24
APP-201ENST00000346798 HFM1A2PYH4 1435 aa16.52■□□□□ 0.24
APP-201ENST00000346798 NAIPQ13075 1403 aa16.52■□□□□ 0.24
APP-201ENST00000346798 RBM19Q9Y4C8 960 aaKnown RBP16.52■□□□□ 0.23
APP-201ENST00000346798 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
APP-201ENST00000346798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.5■□□□□ 0.23
APP-201ENST00000346798 MYOM3Q5VTT5 1437 aa16.5■□□□□ 0.23
APP-201ENST00000346798 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
APP-201ENST00000346798 PTPN23Q9H3S7 1636 aa16.49■□□□□ 0.23
APP-201ENST00000346798 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
APP-201ENST00000346798 WASHC2AQ641Q2 1341 aa16.47■□□□□ 0.23
APP-201ENST00000346798 URB2Q14146 1524 aaKnown RBP16.47■□□□□ 0.23
APP-201ENST00000346798 GAPVD1Q14C86 1478 aa16.47■□□□□ 0.23
APP-201ENST00000346798 CUL7Q14999 1698 aa16.46■□□□□ 0.23
APP-201ENST00000346798 CCDC184Q52MB2 194 aa16.46■□□□□ 0.23
APP-201ENST00000346798 POLR3GLQ9BT43 218 aa16.46■□□□□ 0.22
APP-201ENST00000346798 EIF4G2P78344 907 aaKnown RBP eCLIP16.45■□□□□ 0.22
APP-201ENST00000346798 L3MBTL2Q969R5 705 aa16.44■□□□□ 0.22
APP-201ENST00000346798 MPHOSPH9Q99550 1183 aa16.43■□□□□ 0.22
APP-201ENST00000346798 SENP3-EIF4A1A0A087X0R7 540 aa16.43■□□□□ 0.22
APP-201ENST00000346798 LRRIQ1Q96JM4 1722 aa16.41■□□□□ 0.22
APP-201ENST00000346798 GRIN2BQ13224 1484 aa16.4■□□□□ 0.22
APP-201ENST00000346798 C11orf95C9JLR9 678 aaPredicted RBP16.4■□□□□ 0.22
APP-201ENST00000346798 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
APP-201ENST00000346798 SUPT6HQ7KZ85 1726 aaKnown RBP16.39■□□□□ 0.21
APP-201ENST00000346798 MAGI3Q5TCQ9 1506 aa16.38■□□□□ 0.21
APP-201ENST00000346798 MRS2Q9HD23 443 aa16.38■□□□□ 0.21
APP-201ENST00000346798 ZNF644Q9H582 1327 aaPredicted RBP16.37■□□□□ 0.21
APP-201ENST00000346798 CDK13Q14004 1512 aaKnown RBP16.36■□□□□ 0.21
APP-201ENST00000346798 EHBP1L1Q8N3D4 1523 aa16.36■□□□□ 0.21
APP-201ENST00000346798 SLC4A1APQ9BWU0 796 aaKnown RBP16.35■□□□□ 0.21
APP-201ENST00000346798 CDK11AQ9UQ88 783 aaPredicted RBP16.35■□□□□ 0.21
APP-201ENST00000346798 SAMD9Q5K651 1589 aa16.35■□□□□ 0.21
APP-201ENST00000346798 KDM6BO15054 1643 aa16.34■□□□□ 0.21
APP-201ENST00000346798 NBPF8Q3BBV2 869 aa16.33■□□□□ 0.21
APP-201ENST00000346798 KDM5BQ9UGL1 1544 aa16.33■□□□□ 0.21
APP-201ENST00000346798 ZNF777Q9ULD5 760 aaPredicted RBP16.33■□□□□ 0.2
APP-201ENST00000346798 UGGT2Q9NYU1 1516 aa16.33■□□□□ 0.2
APP-201ENST00000346798 PDS5BQ9NTI5 1447 aa16.31■□□□□ 0.2
APP-201ENST00000346798 PRKRIP1Q9H875 184 aaPredicted RBP16.31■□□□□ 0.2
APP-201ENST00000346798 DENND4BO75064 1496 aaPredicted RBP16.31■□□□□ 0.2
APP-201ENST00000346798 B4GALNT3Q6L9W6 998 aa16.31■□□□□ 0.2
APP-201ENST00000346798 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
APP-201ENST00000346798 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
APP-201ENST00000346798 MSH5O43196 834 aa16.29■□□□□ 0.2
APP-201ENST00000346798 EPRSP07814 1512 aaKnown RBP16.29■□□□□ 0.2
APP-201ENST00000346798 ERICH6Q7L0X2 663 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms